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  Chromosome 13 - YAC Map - Single Contig
 

Chromosome 13 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_009984
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009984AL645498300312283D13S2901337.001AL353680, AC002982, AC004088, AL353680, AL645498
S/G/Y/R/B/O NT_009984AL353680300321143      
S/G/Y/R/B/O NT_009984AL158065302070303      
S/G/Y/R/B/O NT_009984AL137142303178363D13S12871338.001 AL137142
S/G/Y/R/B/O NT_009984AL137142303262343WI-48561339.001 AL137142
S/G/Y/R/B/O NT_009984AL138965303889813      
S/G/Y/R/B/O NT_009984AL157695305270403      
S/G/Y/R/B/O NT_009984AL161616306659103CHLC.GATA86B091340.001 AL161616
S/G/Y/R/B/O NT_009984AL136178307738643WI-44161341.001 AC020573, AL136178
S/G/Y/R/B/O NT_009984AL159161308408213      
S/G/Y/R/B/O NT_009984AL138708310387983D13S2601342.001 AL138708, U73331
S/G/Y/R/B/O NT_009984AC002525311018673      
S/G/Y/R/B/O NT_009984AL137143311888163      
S/G/Y/R/B/O NT_009984AL138692312923793      
S/G/Y/R/B/O NT_009984AL445212314545033WI-66661343.001 AC021571, AL445212, Z74739
S/G/Y/R/B/O NT_009984AL137247316009573WI-102431344.001 AC021571, AL137247, Z73359
S/G/Y/R/B/O NT_009984AL353665316538083      
S/G/Y/R/B/O NT_009984Z84467317197083      
S/G/Y/R/B/O NT_009984Z75889318557063D13S1711345.001 Z75889
S/G/Y/R/B/O NT_009984Z84572319250433      
S/G/Y/R/B/O NT_009984AL138820320621903      
S/G/Y/R/B/O NT_009984AL355504320939403      
S/G/Y/R/B/O NT_009984AL161898321539993      
S/G/Y/R/B/O NT_009984AL139187322767383      
S/G/Y/R/B/O NT_009984AL627232324621273WI-55591346.001 AC009880, AL627232
S/G/Y/R/B/O NT_009984AL138999324944963      
S/G/Y/R/B/O NT_009984AL139383325463273      
S/G/Y/R/B/O NT_009984AL161719327291443      
S/G/Y/R/B/O NT_009984AL139081328659051D13S2671347.001 AL139081
S/G/Y/R/B/O NT_009984AL161891330135863      
S/G/Y/R/B/O NT_009984AL160394331365563      
S/G/Y/R/B/O NT_009984AL603624333045293      
S/G/Y/R/B/O NT_009984AL356321333065233      
S/G/Y/R/B/O NT_009984AL356751334669643      
S/G/Y/R/B/O NT_009984AL138956334728343      
S/G/Y/R/B/O NT_009984AL138961336379903      
S/G/Y/R/B/O NT_009984AL161716337713403D13S2201348.001 AL161716
S/G/Y/R/B/O NT_009984AL390295338631453      
S/G/Y/R/B/O NT_009984AL138690340801843WI-52831349.001 AL138690
S/G/Y/R/B/O NT_009984AL161902341478763      
S/G/Y/R/B/O NT_009984AL356430342533143      
S/G/Y/R/B/O NT_009984AL357083344232003      
S/G/Y/R/B/O NT_009984AL161718345553563      
S/G/Y/R/B/O NT_009984AL390071346137921      
S/G/Y/R/B/O NT_009984AL159160347846903      
S/G/Y/R/B/O NT_009984AL139083348124413WI-11391351.001 AL139083
S/G/Y/R/B/O NT_009984AL139083348483833IB2371350.001 AL139083
S/G/Y/R/B/O NT_009984AL157760350278203AFMB316WB51355.001 AL157760
S/G/Y/R/B/O NT_009984AL390029350834433WI-68661354.001 AL390029
S/G/Y/R/B/O NT_009984AL157694352538283WI-33741353.001 AL157694


  NT_009984 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009984AL157694352696303WI-87241352.001 AL157694
S/G/Y/R/B/O NT_009984AL160392352938703      
S/G/Y/R/B/O NT_009984AL139377354003553      
S/G/Y/R/B/O NT_009984AL359767355542193      
S/G/Y/R/B/O NT_009984AL159980357601863D13S2191356.001 AC068070, AL159980
S/G/Y/R/B/O NT_009984AL136160357875773      
S/G/Y/R/B/O NT_009984AL159973359429073      
S/G/Y/R/B/O NT_009984AL138706360189813      
S/G/Y/R/B/O NT_009984AL391383362139133      
S/G/Y/R/B/O NT_009984AL356274363108343      
S/G/Y/R/B/O NT_009984AL592066363794603      
S/G/Y/R/B/O NT_009984AL138711365246863WI-98421357.001 AL138711
S/G/Y/R/B/O NT_009984AL136220365624643      
S/G/Y/R/B/O NT_009984AL646087367385623WI-72981358.001 AL646087
S/G/Y/R/B/O NT_009984AL138679367577673      
S/G/Y/R/B/O NT_009984AL354802368597923      
S/G/Y/R/B/O NT_009984AL356495371650473CHLC.GATA89F041361.001 AL356495
S/G/Y/R/B/O NT_009984AL356359372045503      
S/G/Y/R/B/O NT_009984AL137245373393383AFM193XA91359.001 AL137245
S/G/Y/R/B/O NT_009984AL137245373402953CHLC.GATA86H011360.001AC068406, AC068406, AL137245
S/G/Y/R/B/O NT_009984AL590028373719333      
S/G/Y/R/B/O NT_009984AL356863375011653      
S/G/Y/R/B/O NT_009984AL441986376340173D13S2181363.001 AL441986
S/G/Y/R/B/O NT_009984AL441986376805753WI-56041362.001 AL441986
S/G/Y/R/B/O NT_009984AC017111378119253      
S/G/Y/R/B/O NT_009984AL590007379473622      
S/G/Y/R/B/O NT_009984AL354819379699593      
S/G/Y/R/B/O NT_009984AL607149381211083      
S/G/Y/R/B/O NT_009984AL445590381250783      
S/G/Y/R/B/O NT_009984AL157761382842223WI-74641364.001 AL157761, AL513495
S/G/Y/R/B/O NT_009984AL354809383123633      
S/G/Y/R/B/O NT_009984AL138685384478823      
S/G/Y/R/B/O NT_009984AL158194385324683      
S/G/Y/R/B/O NT_009984AL136358387480623D13S12531365.001 AL136358
S/G/Y/R/B/O NT_009984AL512505388278943      
S/G/Y/R/B/O NT_009984AL596306389453163      
S/G/Y/R/B/O NT_009984AL138702390123433      
S/G/Y/R/B/O NT_009984AL355610392019103      
S/G/Y/R/B/O NT_009984AL356217393617382D13S12481366.001 AL356217
S/G/Y/R/B/O NT_009984AL445143394024483      
S/G/Y/R/B/O NT_009984AL391724396788613D13S12331368.001 AC078964
S/G/Y/R/B/O NT_009984AL133318396925473      
S/G/Y/R/B/O NT_009984AL592167397743093      
S/G/Y/R/B/O NT_009984AL355132397927512WI-88901367.001 AC084099, AL355132, AL390202
S/G/Y/R/B/O NT_009984AL161614399324873      
S/G/Y/R/B/O NT_009984AL590064400014333      
S/G/Y/R/B/O NT_009984AL157877400731993      
S/G/Y/R/B/O NT_009984AL161775402697663      
S/G/Y/R/B/O NT_009984AL354696402952053      
S/G/Y/R/B/O NT_009984AL590665404976703      


  NT_009984 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009984AC090339405580941WI-400311232.002AC090382, AC091102, AP000633, AP000753, AP001193, AP001844, AP001871, AC090339, AC090382, AC091102, AP000633, AP000753, AP001140, AP001193, AP001844, AP001871
S/G/Y/R/B/O NT_009984AC090339406464551WI-989011233.002AC090382, AC091102, AP000753, AP001193, AP001844, AC090339, AC090382, AC091102, AP000753, AP001140, AP001193, AP001844
S/G/Y/R/B/O NT_009984AC068406405932081