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  Chromosome 16 - YAC Map - Single Contig
 

Chromosome 16 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010552
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010552AC004778116489103      
S/G/Y/R/B/O NT_010552AC004653116790853      
S/G/Y/R/B/O NT_010552AC005211117152283      
S/G/Y/R/B/O NT_010552AC005356117491913      
S/G/Y/R/B/O NT_010552AC012676117685523      
S/G/Y/R/B/O NT_010552AC007606119095883      
S/G/Y/R/B/O NT_010552AC023830120467133      
S/G/Y/R/B/O NT_010552AC020663121507713      
S/G/Y/R/B/O NT_010552AC027687122992743      
S/G/Y/R/B/O NT_010552AC007011123595843      
S/G/Y/R/B/O NT_010552AC026458125208483      
S/G/Y/R/B/O NT_010552AC074051126022023      
S/G/Y/R/B/O NT_010552AC005569128114123      
S/G/Y/R/B/O NT_010552AC005364128322183      
S/G/Y/R/B/O NT_010552AC005347128608453      
S/G/Y/R/B/O NT_010552AC005563128816333      
S/G/Y/R/B/O NT_010552AC068001129143471      
S/G/Y/R/B/O NT_010552AC023822129172032      
S/G/Y/R/B/O NT_010552AC005737130124803      
S/G/Y/R/B/O NT_010552AC012175131865783      
S/G/Y/R/B/O NT_010552AC005751134287933D16S423161.001AC009135, AC005751, AC009135
S/G/Y/R/B/O NT_010552AC009135134604663      
S/G/Y/R/B/O NT_010552AC023829135504593      
S/G/Y/R/B/O NT_010552AC007217162909872WI-4274162.001 AC007217
S/G/Y/R/B/O NT_010552AC010552136513821      
S/G/Y/R/B/O NT_010552Z84812136910443WI-86572438.004AC073186, AL078621, AL135795, AC016767, AC073186, AE006462, AL078621, AL135795, AL627309, Z84812
S/G/Y/R/B/O NT_010552Z84723136984233      
S/G/Y/R/B/O NT_010552Z69719137149813      
S/G/Y/R/B/O NT_010552Z69720137484093      
S/G/Y/R/B/O NT_010552Z84722137805713      
S/G/Y/R/B/O NT_010552Z84813137991093      
S/G/Y/R/B/O NT_010552Z69666138028463      
S/G/Y/R/B/O NT_010552Z84721138167863      
S/G/Y/R/B/O NT_010552Z69706138595373      
S/G/Y/R/B/O NT_010552Z69890138825993      
S/G/Y/R/B/O NT_010552AC004754139107633      
S/G/Y/R/B/O NT_010552Z69667139498563      
S/G/Y/R/B/O NT_010552Z99754139713013      
S/G/Y/R/B/O NT_010552AC004652139932263      
S/G/Y/R/B/O NT_010552AC005202140164993      
S/G/Y/R/B/O NT_010552Z97634140446853      
S/G/Y/R/B/O NT_010552AL023881140781983      
S/G/Y/R/B/O NT_010552AL049542141136773      
S/G/Y/R/B/O NT_010552Z98882141724623      
S/G/Y/R/B/O NT_010552Z97986142088693      
S/G/Y/R/B/O NT_010552Z98883142450763      
S/G/Y/R/B/O NT_010552Z98881142787803      
S/G/Y/R/B/O NT_010552Z84479142821093      
S/G/Y/R/B/O NT_010552AL022341143137023      
S/G/Y/R/B/O NT_010552Z92544143341363      


  NT_010552 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010552Z97653143708363      
S/G/Y/R/B/O NT_010552Z98258143957783      
S/G/Y/R/B/O NT_010552AL031258144245133      
S/G/Y/R/B/O NT_010552AL031033144617163      
S/G/Y/R/B/O NT_010552AL023882144874313      
S/G/Y/R/B/O NT_010552AL031008145228073      
S/G/Y/R/B/O NT_010552AL031716145387503      
S/G/Y/R/B/O NT_010552AL008727145620383      
S/G/Y/R/B/O NT_010552Z93041145943843      
S/G/Y/R/B/O NT_010552Z92845146184513      
S/G/Y/R/B/O NT_010552Z99757146533413      
S/G/Y/R/B/O NT_010552AL024496146857433      
S/G/Y/R/B/O NT_010552AL031707147128533      
S/G/Y/R/B/O NT_010552AL031706147414603      
S/G/Y/R/B/O NT_010552AL031713147543723      
S/G/Y/R/B/O NT_010552AL031598147872743      
S/G/Y/R/B/O NT_010552AE006466148084043      
S/G/Y/R/B/O NT_010552AL031714149869003      
S/G/Y/R/B/O NT_010552AL031709150076333      
S/G/Y/R/B/O NT_010552AL031721150450093      
S/G/Y/R/B/O NT_010552AE006467150815643      
S/G/Y/R/B/O NT_010552AL031600151165513      
S/G/Y/R/B/O NT_010552AL031705151480643      
S/G/Y/R/B/O NT_010552AL031720151905333      
S/G/Y/R/B/O NT_010552AL031719151936173      
S/G/Y/R/B/O NT_010552Z97633152381703      
S/G/Y/R/B/O NT_010552AL133297152547263      
S/G/Y/R/B/O NT_010552Z97652152817103      
S/G/Y/R/B/O NT_010552AL031708153099293      
S/G/Y/R/B/O NT_010552AL031009153445503      
S/G/Y/R/B/O NT_010552AL031710153739183      
S/G/Y/R/B/O NT_010552AL031717153985713      
S/G/Y/R/B/O NT_010552AL031718154417593      
S/G/Y/R/B/O NT_010552AL031724154622713      
S/G/Y/R/B/O NT_010552AL031722154835901      
S/G/Y/R/B/O NT_010552AL132823155215703      
S/G/Y/R/B/O NT_010552AL499628155253013      
S/G/Y/R/B/O NT_010552AL031723155686583      
S/G/Y/R/B/O NT_010552AC005363156098133      
S/G/Y/R/B/O NT_010552AC005606156493853      
S/G/Y/R/B/O NT_010552AC093513156975383      
S/G/Y/R/B/O NT_010552AC005600156992093      
S/G/Y/R/B/O NT_010552L39891157787953      
S/G/Y/R/B/O NT_010552AC005346158175173      
S/G/Y/R/B/O NT_010552AC009065158469302      
S/G/Y/R/B/O NT_010552AC007111158469393      
S/G/Y/R/B/O NT_010552AC098805159297453      
S/G/Y/R/B/O NT_010552AC106820160243872      
S/G/Y/R/B/O NT_010552AC025283160964461      
S/G/Y/R/B/O NT_010552AC004035161145483      


  NT_010552 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010552AC005362161504343      
S/G/Y/R/B/O NT_010552AC004646161650483      
S/G/Y/R/B/O NT_010552AC004751161991213      
S/G/Y/R/B/O NT_010552AC006112163442963      
S/G/Y/R/B/O NT_010552AC007223165371463AFM339XG1168.001 AC007223
S/G/Y/R/B/O NT_010552AC007223165696123AFM288ZF91610.001 AC007223
S/G/Y/R/B/O NT_010552AC007223166278573D16S506169.001AC007012, AC007012, AC007223
S/G/Y/R/B/O NT_010552AC007012166910903D16S3042167.001 AC007012
S/G/Y/R/B/O NT_010552AC007012167744723D16S3135166.001 AC007012
S/G/Y/R/B/O NT_010552AC003966167862213      
S/G/Y/R/B/O NT_010552AC004232168195643      
S/G/Y/R/B/O NT_010552AJ003147168493663      
S/G/Y/R/B/O NT_010552AC108134170889323      
S/G/Y/R/B/O NT_010552AC004643170892813      
S/G/Y/R/B/O NT_010552AC004233171209233      
S/G/Y/R/B/O NT_010552AC004235171526553      
S/G/Y/R/B/O NT_010552AC004034171824763      
S/G/Y/R/B/O NT_010552AC004234172164683      
S/G/Y/R/B/O NT_010552AC003965172563953      
S/G/Y/R/B/O NT_010552AC005361172903083      
S/G/Y/R/B/O NT_010552AC005570173180883      
S/G/Y/R/B/O NT_010552AC092117173535552      
S/G/Y/R/B/O NT_010552AC093525175190852      
S/G/Y/R/B/O NT_010552AC005591175975903      
S/G/Y/R/B/O NT_010552AC093517176765313      
S/G/Y/R/B/O NT_010552AC004493178278183      
S/G/Y/R/B/O NT_010552AC004224178360783      
S/G/Y/R/B/O NT_010552AC004494178775733      
S/G/Y/R/B/O NT_010552AC006111179034103      
S/G/Y/R/B/O NT_010552AC004651180899813      
S/G/Y/R/B/O NT_010552AC004509181303873      
S/G/Y/R/B/O NT_010552AC007151181681543      
S/G/Y/R/B/O NT_010552AC005736183324583      
S/G/Y/R/B/O NT_010552AC004647184987543      
S/G/Y/R/B/O NT_010552AC004750185163563      
S/G/Y/R/B/O NT_010552AC005568185365453      
S/G/Y/R/B/O NT_010552AC009171185588201