Home    Genome Browser    BLAT Search    Help
  Chromosome 16 - YAC Map - Single Contig
 

Chromosome 16 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010478
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010478AC009033718783033      
S/G/Y/R/B/O NT_010478AC009104720369293      
S/G/Y/R/B/O NT_010478AC092114721367083      
S/G/Y/R/B/O NT_010478AC092344721708373      
S/G/Y/R/B/O NT_010478AC087565724309913AFM101XG316205.001AC092128, AC046201, AC087565, AC092128
S/G/Y/R/B/O NT_010478AC092128724666703      
S/G/Y/R/B/O NT_010478AC004605726260173D16S51216204.001 AC004605, AC080184
S/G/Y/R/B/O NT_010478AC004605727309313D16S301816206.001AC009120, AC004605, AC009120, AC010257, AC080184
S/G/Y/R/B/O NT_010478AC009120727990083      
S/G/Y/R/B/O NT_010478AC009053729181413      
S/G/Y/R/B/O NT_010478AC009153730884863D16S311516207.001 AC009153
S/G/Y/R/B/O NT_010478AC109599733388631WI-472316208.001 AC109599
S/G/Y/R/B/O NT_010478AL139227731673482      
S/G/Y/R/B/O NT_010478AC074049731988961      
S/G/Y/R/B/O NT_010478AC009092732092691      
S/G/Y/R/B/O NT_010478AC004685734275563WI-653116209.001 AC004685
S/G/Y/R/B/O NT_010478AC009132735122832      
S/G/Y/R/B/O NT_010478AC092383736681832      
S/G/Y/R/B/O NT_010478AP001588736749981      
S/G/Y/R/B/O NT_010478AC009162736908493D16S302516192.001AC009092, AL139227, AC009092, AC009162, AL139227
S/G/Y/R/B/O NT_010478AC099521737365723      
S/G/Y/R/B/O NT_010478AC020978738826023      
S/G/Y/R/B/O NT_010478AC004531740235443      
S/G/Y/R/B/O NT_010478AC009077742151093      
S/G/Y/R/B/O NT_010478AC040162743037873      
S/G/Y/R/B/O NT_010478AC010530744212873      
S/G/Y/R/B/O NT_010478AC009095746149011      
S/G/Y/R/B/O NT_010478AC027682746400471      
S/G/Y/R/B/O NT_010478AC020763746521152      
S/G/Y/R/B/O NT_010478AC106804748166382      
S/G/Y/R/B/O NT_010478AC012184749769111      
S/G/Y/R/B/O NT_010478AC099508750457743      
S/G/Y/R/B/O NT_010478AC009078751180213      
S/G/Y/R/B/O NT_010478AC009054752949473      
S/G/Y/R/B/O NT_010478AC009163754445353      
S/G/Y/R/B/O NT_010478AC025287755950783WI-61921815.001 AC011934, AC025287
S/G/Y/R/B/O NT_010478AC009122757352533      
S/G/Y/R/B/O NT_010478AC105430758463793      
S/G/Y/R/B/O NT_010478AC092379759751583      
S/G/Y/R/B/O NT_010478AC099511761088123      
S/G/Y/R/B/O NT_010478AC106737762190361      
S/G/Y/R/B/O NT_010478AC010549762583171      
S/G/Y/R/B/O NT_010478AC093491762702933      
S/G/Y/R/B/O NT_010478AC009060764353933WI-69271691.002AC009086, AC009060, AC009086
S/G/Y/R/B/O NT_010478AC009022765392583      
S/G/Y/R/B/O NT_010478AC026468766816213      
S/G/Y/R/B/O NT_010478AC092115768612961      
S/G/Y/R/B/O NT_010478AC009071768922442      
S/G/Y/R/B/O NT_010478AC009046770303183WI-117516210.001AC010528, AC106737, AC009046, AC010528, AC084005, AC106737
S/G/Y/R/B/O NT_010478AC010528770709233      


  NT_010478 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010478AC106741771845793D16S308316211.001 AC108133
S/G/Y/R/B/O NT_010478AC106741772162203D16S51516212.001 AC106741, AC108133
S/G/Y/R/B/O NT_010478AC108125773823593D16S314216213.001AC104151, AC104151, AC108125
S/G/Y/R/B/O NT_010478AC104151774171233      
S/G/Y/R/B/O NT_010478AC012321775715753      
S/G/Y/R/B/O NT_010478AC009032776738803      
S/G/Y/R/B/O NT_010478AC026464778423103      
S/G/Y/R/B/O NT_010478AC026474780324952      
S/G/Y/R/B/O NT_010478AC108079780768611      
S/G/Y/R/B/O NT_010478AC009131780851313      
S/G/Y/R/B/O NT_010478AC009027782256093IB56516189.001AC009131, AC009027, AC009131
S/G/Y/R/B/O NT_010478AC009027782368553WI-831916190.001AC009131, AC009027, AC009131
S/G/Y/R/B/O NT_010478AC009137783946903D16S49616191.001 AC009137
S/G/Y/R/B/O NT_010478AC009082784224543      
S/G/Y/R/B/O NT_010478AC099314784684313      
S/G/Y/R/B/O NT_010478AC010289786558903      
S/G/Y/R/B/O NT_010478AC010542787529733      
S/G/Y/R/B/O NT_010478AC018557788602192      
S/G/Y/R/B/O NT_010478AC018589789022091      
S/G/Y/R/B/O NT_010478AC026397789671883      
S/G/Y/R/B/O NT_010478AC027131790921863      
S/G/Y/R/B/O NT_010478AC009084792180883      
S/G/Y/R/B/O NT_010478AC074143792796101      
S/G/Y/R/B/O NT_010478AC040160793429733      
S/G/Y/R/B/O NT_010478AC009061795521923      
S/G/Y/R/B/O NT_010478AC009042797504921CHLC.GATA49E125341.002AC016567, AC022142, AC008377, AC008653, AC008815, AC009042, AC016567, AC022142, AC034212
S/G/Y/R/B/O NT_010478 - RK1421_142216193.001AC009779, AC023055, AC009779, AC023055
S/G/Y/R/B/O NT_010478 - D16S313916194.001AC010748, AC010748
S/G/Y/R/B/O NT_010478 - WI-935916195.001AC009087, AC009087
S/G/Y/R/B/O NT_010478 - WI-628416196.001AC009127, AC009127
S/G/Y/R/B/O NT_010478 - WI-622116197.001AC009127, AC010653, AC009127, AC010653
S/G/Y/R/B/O NT_010478 - NIB115816198.001AC009127, AC010653, AC009127, AC010653
S/G/Y/R/B/O NT_010478 - CHLC.GATA81D1216199.001AC009097, AC010653, AC009097, AC010653
S/G/Y/R/B/O NT_010478 - WI-1017316200.001AC004682, AC009087, AC004682, AC009087, AC009160, M69197, M92069
S/G/Y/R/B/O NT_010478 - WI-525416201.001AC092289, AC010651, AC092289
S/G/Y/R/B/O NT_010478 - WI-400816202.001AC004158, AC004158, AC010651, AC012324
S/G/Y/R/B/O NT_010478 - D16S303316203.000