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  Chromosome 17 - YAC Map - Single Contig
 

Chromosome 17 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010718
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010718AC008053102630901      
S/G/Y/R/B/O NT_010718AC010964102685461      
S/G/Y/R/B/O NT_010718AC026591125299082WI-92051719.002AC005747, AC069006, AC087646, AC005747, AC026591, AC069006, AC087646
S/G/Y/R/B/O NT_010718AC026591125942912D17S8041720.001AC005747, AC107938, AC005747, AC026591, AC107938
S/G/Y/R/B/O NT_010718AC073337102960011      
S/G/Y/R/B/O NT_010718AC090610110280421CHLC.GGAT2G07.13851715.001AC073337, AC073337, AC090610
S/G/Y/R/B/O NT_010718AC002091103676493D17S18581713.001AC073337, AC090610, AC002091, AC073337, AC090610
S/G/Y/R/B/O NT_010718AC003695104239833AFMB322YG51712.001AC002091, AC002091
S/G/Y/R/B/O NT_010718AC003695104240903D17S7861711.001AC002091, AC002091, AC003695
S/G/Y/R/B/O NT_010718AC009451105287901      
S/G/Y/R/B/O NT_010718AC025963106380341      
S/G/Y/R/B/O NT_010718AC011061106595511D17S18051710.001AC009451, AC025963, AC009451, AC011061, AC025959, AC025963
S/G/Y/R/B/O NT_010718AC025518107644941      
S/G/Y/R/B/O NT_010718AC026130108086051      
S/G/Y/R/B/O NT_010718AC005695111603743D17S9521714.001 AC005695
S/G/Y/R/B/O NT_010718AC005695112031493D17S17911716.001 AC005695
S/G/Y/R/B/O NT_010718AC009335112604943      
S/G/Y/R/B/O NT_010718AC087501114062121      
S/G/Y/R/B/O NT_010718AC021164114538741      
S/G/Y/R/B/O NT_010718AC073621115406361      
S/G/Y/R/B/O NT_010718AC069486115750101      
S/G/Y/R/B/O NT_010718AC015818116760141      
S/G/Y/R/B/O NT_010718AL353997117455692      
S/G/Y/R/B/O NT_010718AL035367118438003      
S/G/Y/R/B/O NT_010718AC020567119762851      
S/G/Y/R/B/O NT_010718AC109515119853382      
S/G/Y/R/B/O NT_010718AC027045121740111CHLC.GGAT15G061717.001AC026855, AC026855
S/G/Y/R/B/O NT_010718AC026855120796791      
S/G/Y/R/B/O NT_010718AC087646123176201WI-92051719.002AC005747, AC026591, AC069006, AC005747, AC026591, AC069006, AC087646
S/G/Y/R/B/O NT_010718AC069006121076411      
S/G/Y/R/B/O NT_010718AC087499123181991      
S/G/Y/R/B/O NT_010718AC022319123651831      
S/G/Y/R/B/O NT_010718AC106031124352642D17S9591762.001AC022319, AC022319, AC106031, AL356743
S/G/Y/R/B/O NT_010718AC005747126022133      
S/G/Y/R/B/O NT_010718AC107938126836472      
S/G/Y/R/B/O NT_010718AC000003127100133AFMA070WD11722.001AC010964, AC010964
S/G/Y/R/B/O NT_010718AC000003127591213WI-98951721.001AC107938, AC000003, AC107938
S/G/Y/R/B/O NT_010718AC083783128413692D17S18791718.001 AC083783
S/G/Y/R/B/O NT_010718AC005291128432453      
S/G/Y/R/B/O NT_010718AC005323130418273      
S/G/Y/R/B/O NT_010718AC002347132441103D17S18521723.001 AC002347, AC034303
S/G/Y/R/B/O NT_010718AC015908135202413D17S9541724.001AC005284, AC005284
S/G/Y/R/B/O NT_010718AC005284135878943CHLC.GATA64B041725.001 AC005284
S/G/Y/R/B/O NT_010718AC005284136085003WI-64781727.001 AC005284
S/G/Y/R/B/O NT_010718AC005284136700093AFMA043ZB51726.001 AC005284
S/G/Y/R/B/O NT_010718AC005548138119453WI-57431728.001 AC005548
S/G/Y/R/B/O NT_010718AC005725138615923      
S/G/Y/R/B/O NT_010718AC055825140575073      
S/G/Y/R/B/O NT_010718AC007510140723143      
S/G/Y/R/B/O NT_010718AC005701142139213      


  NT_010718 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010718AC005209145735573CHLC.GATA10H071729.001 AC005209
S/G/Y/R/B/O NT_010718AC005410145922793      
S/G/Y/R/B/O NT_010718AC005244147279993      
S/G/Y/R/B/O NT_010718AC005245149701263WI-24371730.001 AC005245, AC084167
S/G/Y/R/B/O NT_010718AC084836150238181      
S/G/Y/R/B/O NT_010718AC021513151631792      
S/G/Y/R/B/O NT_010718AC006079151999653      
S/G/Y/R/B/O NT_010718AC068442152132333WI-23351731.001 AC068442
S/G/Y/R/B/O NT_010718AC005358152236103      
S/G/Y/R/B/O NT_010718AC005274155349413D17S9471732.001 AC005274
S/G/Y/R/B/O NT_010718AC005277156116433      
S/G/Y/R/B/O NT_010718AC005303157284323      
S/G/Y/R/B/O NT_010718AC003664158995613D17S7991734.001 AC003664
S/G/Y/R/B/O NT_010718AC005375161617893D17S9361733.001AC005411, AC005375, AC005411
S/G/Y/R/B/O NT_010718AC005411161897173WI-54971735.001 AC005411
S/G/Y/R/B/O NT_010718AC015842163255853      
S/G/Y/R/B/O NT_010718AC005497164395183      
S/G/Y/R/B/O NT_010718AC005304166455383D17S18561736.001 AC005304
S/G/Y/R/B/O NT_010718AC005389167597173D17S9221737.001 AC005389
S/G/Y/R/B/O NT_010718AC005224168155723      
S/G/Y/R/B/O NT_010718AC022816169892043D17S9211738.001 AC022816
S/G/Y/R/B/O NT_010718AC006578170804243D17S9551739.001 AC006578, AC025205, AC078823
S/G/Y/R/B/O NT_010718AC005900172137953D17S8391740.001 AC005900
S/G/Y/R/B/O NT_010718AC013248173218393      
S/G/Y/R/B/O NT_010718AC005863173864103      
S/G/Y/R/B/O NT_010718AC005773175566073      
S/G/Y/R/B/O NT_010718AC005772177893623WI-55391741.001 AC005772
S/G/Y/R/B/O NT_010718AC005703178617023WI-90031742.001 AC005703
S/G/Y/R/B/O NT_010718AC005517180584363      
S/G/Y/R/B/O NT_010718AC005838181944853WI-8681746.002AC107931, AC107982, AC005838, AC018989, AC026964, AC084256, AC107931, AC107982
S/G/Y/R/B/O NT_010718AC005324182396393WI-33831743.002AC107931, AC107982, AC005324, AC018989, AC026964, AC107931, AC107982
S/G/Y/R/B/O NT_010718AC005324183359983WI-71481745.002AC020922, AC116338, AC005324, AC018989, AC020922, AC026964, AC116338
S/G/Y/R/B/O NT_010718AC015922183969452      
S/G/Y/R/B/O NT_010718AC006251186069863WI-92661748.001 AC006251, AL354046
S/G/Y/R/B/O NT_010718AC002553187348823WI-30511750.001 AC002553
S/G/Y/R/B/O NT_010718AC002553187927033D17S18431749.001 AC002553
S/G/Y/R/B/O NT_010718AC005971188307743D17S9531747.001 AJ009616
S/G/Y/R/B/O NT_010718AC005971188496003WI-63231751.001 AC005971, AJ009616
S/G/Y/R/B/O NT_010718AC005971188800053WI-45271752.001 AC005971, AL356460
S/G/Y/R/B/O NT_010718AC093484189913593      
S/G/Y/R/B/O NT_010718AJ009612190941713WI-65801754.001AC005822, AC005822, AJ009612
S/G/Y/R/B/O NT_010718AJ009612191435453D17S18571753.001 AJ009612
S/G/Y/R/B/O NT_010718AC005822192260553      
S/G/Y/R/B/O NT_010718AC098850192553852      
S/G/Y/R/B/O NT_010718AC022596194343503      
S/G/Y/R/B/O NT_010718AL353996195064313      
S/G/Y/R/B/O NT_010718AC104024195833122      
S/G/Y/R/B/O NT_010718AC027775196992811      
S/G/Y/R/B/O NT_010718AC006071197036153      
S/G/Y/R/B/O NT_010718AC002092197873061      


  NT_010718 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010718AJ009613197974653      
S/G/Y/R/B/O NT_010718AC055811198273981      
S/G/Y/R/B/O NT_010718AC079111200600351      
S/G/Y/R/B/O NT_010718AC020558201030673      
S/G/Y/R/B/O NT_010718AC078903202864011      
S/G/Y/R/B/O NT_010718AC080148203200371      
S/G/Y/R/B/O NT_010718AL354000203574222      
S/G/Y/R/B/O NT_010718AC087163205179641      
S/G/Y/R/B/O NT_010718AC087164206533873      
S/G/Y/R/B/O NT_010718 - WI-94401744.001AC026271, AC026271, AF032887