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  Chromosome 17 - YAC Map - Single Contig
 

Chromosome 17 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010783
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC018628483186891      
S/G/Y/R/B/O NT_010783AC008158484605863      
S/G/Y/R/B/O NT_010783AC060798485847231      
S/G/Y/R/B/O NT_010783AC005969486275953      
S/G/Y/R/B/O NT_010783AC002994488255663D17S185517197.001 AC002994
S/G/Y/R/B/O NT_010783AC002994488433823CHLC.GATA6G1017196.001 AC002994
S/G/Y/R/B/O NT_010783AC005901489146513      
S/G/Y/R/B/O NT_010783AC005746490702623FB10A217198.001AC005901, AC005746, AC005901
S/G/Y/R/B/O NT_010783AC005856492567703      
S/G/Y/R/B/O NT_010783AC005884493816813      
S/G/Y/R/B/O NT_010783AC015876495018681      
S/G/Y/R/B/O NT_010783AC079005496160112      
S/G/Y/R/B/O NT_010783AC110602497593892      
S/G/Y/R/B/O NT_010783AC053536497622891      
S/G/Y/R/B/O NT_010783AC090166497686771      
S/G/Y/R/B/O NT_010783AC091154499036352CHLC.GATA21E0317162.001AC053536, AC090166, AC053536, AC073480, AC090166, AC091154
S/G/Y/R/B/O NT_010783AC091154499825172WI-308117163.001 AC073480, AC091154
S/G/Y/R/B/O NT_010783AC004606500071763      
S/G/Y/R/B/O NT_010783AC087496500655183      
S/G/Y/R/B/O NT_010783AC005341501235863      
S/G/Y/R/B/O NT_010783AC090614502608833      
S/G/Y/R/B/O NT_010783AC090079504134351      
S/G/Y/R/B/O NT_010783AC034268504147132      
S/G/Y/R/B/O NT_010783AC019315506136483      
S/G/Y/R/B/O NT_010783AC023934507588021      
S/G/Y/R/B/O NT_010783AC021010508259621      
S/G/Y/R/B/O NT_010783AC019147509401911      
S/G/Y/R/B/O NT_010783AC009720509454991      
S/G/Y/R/B/O NT_010783AC092713509637721      
S/G/Y/R/B/O NT_010783AC046185510131491      
S/G/Y/R/B/O NT_010783AC074102510599351      
S/G/Y/R/B/O NT_010783AC015813602229401WI-669717181.001 AC015813
S/G/Y/R/B/O NT_010783AC002345511007591      
S/G/Y/R/B/O NT_010783AC112167511240741      
S/G/Y/R/B/O NT_010783AC069454511685111      
S/G/Y/R/B/O NT_010783AC008026544156101AFMA116XC117202.002AC018636, AC008026, AC018636
S/G/Y/R/B/O NT_010783AC004167513430743WI-854117187.001 AC004167
S/G/Y/R/B/O NT_010783AC005667513882343      
S/G/Y/R/B/O NT_010783AC091059514823401      
S/G/Y/R/B/O NT_010783AC018718514948901      
S/G/Y/R/B/O NT_010783AC069293515035551      
S/G/Y/R/B/O NT_010783AC113210515270282      
S/G/Y/R/B/O NT_010783AC027801516563083WI-6160X235.001 AC027801
S/G/Y/R/B/O NT_010783AC015795516610733      
S/G/Y/R/B/O NT_010783AC006487518131223      
S/G/Y/R/B/O NT_010783AC015656520081961D17S79717145.001 AC015656
S/G/Y/R/B/O NT_010783AC091180520088133      
S/G/Y/R/B/O NT_010783AC004797521640873      
S/G/Y/R/B/O NT_010783AC060233522791501      
S/G/Y/R/B/O NT_010783AC005828523203823WI-640617204.001 AC005828


  NT_010783 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC005828523888973D17S94417203.001 AC005828
S/G/Y/R/B/O NT_010783AC015923524469302      
S/G/Y/R/B/O NT_010783AC068285525261671      
S/G/Y/R/B/O NT_010783AC006270525344243      
S/G/Y/R/B/O NT_010783AC037445527123523      
S/G/Y/R/B/O NT_010783AC005972528358883D17S94817200.001AC068512, AC005972, AC068512
S/G/Y/R/B/O NT_010783AC068512529166221      
S/G/Y/R/B/O NT_010783AC005821530078863D17S79417201.001AC068401, AC005821, AC068401
S/G/Y/R/B/O NT_010783AC068401531120871      
S/G/Y/R/B/O NT_010783AC018571531918801      
S/G/Y/R/B/O NT_010783AC015651531999303      
S/G/Y/R/B/O NT_010783AC040958533865711      
S/G/Y/R/B/O NT_010783AC084858533866411      
S/G/Y/R/B/O NT_010783AC005803534970273WI-600617211.001 AC005803
S/G/Y/R/B/O NT_010783AC005803535335813WI-640817210.001 AC005803
S/G/Y/R/B/O NT_010783AC025362535762222      
S/G/Y/R/B/O NT_010783AC016489536905861      
S/G/Y/R/B/O NT_010783AC073299537128671      
S/G/Y/R/B/O NT_010783AC000389537534913      
S/G/Y/R/B/O NT_010783AC032016537816002WI-988917165.001AC000389, AC000389, AC032016
S/G/Y/R/B/O NT_010783AC011848538211742      
S/G/Y/R/B/O NT_010783AC022732539368091      
S/G/Y/R/B/O NT_010783AC053481540553201      
S/G/Y/R/B/O NT_010783AC080038542539801D17S80817199.001 AC080038
S/G/Y/R/B/O NT_010783AC090167543658631      
S/G/Y/R/B/O NT_010783AC003962545824143D17S92317191.001 AC003962
S/G/Y/R/B/O NT_010783AC037475546791203AFMA274WH517192.001 AC037475
S/G/Y/R/B/O NT_010783AC011921547546373      
S/G/Y/R/B/O NT_010783AC025515548924031      
S/G/Y/R/B/O NT_010783AC023352550218581      
S/G/Y/R/B/O NT_010783AC025048550777611D17S79217190.001AC090167, AC025048, AC090167
S/G/Y/R/B/O NT_010783AC005702551970083WI-680517194.001 AC005702
S/G/Y/R/B/O NT_010783AC004686552935553WI-603417193.001AC005702, AC005702
S/G/Y/R/B/O NT_010783AC004686553401103D17S160417189.001 AC004686
S/G/Y/R/B/O NT_010783AC025858554186861      
S/G/Y/R/B/O NT_010783AC040904554258541      
S/G/Y/R/B/O NT_010783AC091271555459921WI-731817188.001AC040904, AC074102, AC040904, AC074102, AC091271
S/G/Y/R/B/O NT_010783AC021005557313172      
S/G/Y/R/B/O NT_010783AC091113557781042      
S/G/Y/R/B/O NT_010783AC010767558003283AFM268ZG917166.001AC091113, AC010767, AC091113
S/G/Y/R/B/O NT_010783AC010767558298883WI-581717167.001 AC010767
S/G/Y/R/B/O NT_010783AC015943559633212      
S/G/Y/R/B/O NT_010783AC005951560794553D17S79017168.001 AC005951
S/G/Y/R/B/O NT_010783AC090824561937103      
S/G/Y/R/B/O NT_010783AC007485563103133      
S/G/Y/R/B/O NT_010783AC005177565624913D17S78717169.001 AC005177
S/G/Y/R/B/O NT_010783AC005177565664163CHLC.GGAA25C0217171.001 AC005177
S/G/Y/R/B/O NT_010783AC005177565969093GCT6E1117172.001AC007638, AC005177, AC007638
S/G/Y/R/B/O NT_010783AC007638566788443WI-770522121.001 AC007638
S/G/Y/R/B/O NT_010783AC007638567211773D17S179917170.001 AC007638


  NT_010783 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC006269567618902      
S/G/Y/R/B/O NT_010783AC034124568528121      
S/G/Y/R/B/O NT_010783AC027567569245242      
S/G/Y/R/B/O NT_010783AC009837569669961      
S/G/Y/R/B/O NT_010783AC105021570320082      
S/G/Y/R/B/O NT_010783AC091155570365652      
S/G/Y/R/B/O NT_010783AC090618571772002      
S/G/Y/R/B/O NT_010783AC011073573308393      
S/G/Y/R/B/O NT_010783AC006925574914553      
S/G/Y/R/B/O NT_010783AC006600576661123      
S/G/Y/R/B/O NT_010783AC015724579730033WI-459417173.001AC005553, AC005553, AC015724
S/G/Y/R/B/O NT_010783AC005553580177113      
S/G/Y/R/B/O NT_010783AC068550581023341      
S/G/Y/R/B/O NT_010783AC106858581435412WI-1082617178.001AC007933, AC015912, AC068550, AC007933, AC015912, AC068550, AC106858
S/G/Y/R/B/O NT_010783AC007933581546971      
S/G/Y/R/B/O NT_010783AC015912581674531      
S/G/Y/R/B/O NT_010783AC004584582502543WI-627717175.001AC007933, AC015912, AC004584, AC007933, AC015912
S/G/Y/R/B/O NT_010783AC004584582530183WI-930617174.001AC007933, AC015912, AC004584, AC007933, AC015912
S/G/Y/R/B/O NT_010783AC004584582999393WI-720417177.002AC109357, AC004584, AC109357
S/G/Y/R/B/O NT_010783AC007114584826883WI-662317176.001AC003950, AC003950, AC007114
S/G/Y/R/B/O NT_010783AC003950584886103      
S/G/Y/R/B/O NT_010783AC007644585892411      
S/G/Y/R/B/O NT_010783AC073839585931061      
S/G/Y/R/B/O NT_010783AC073970586187591      
S/G/Y/R/B/O NT_010783AC015909586220182      
S/G/Y/R/B/O NT_010783AC025556587946591      
S/G/Y/R/B/O NT_010783AC091133588022941      
S/G/Y/R/B/O NT_010783AC105030588145312      
S/G/Y/R/B/O NT_010783AC008630588906132      
S/G/Y/R/B/O NT_010783AC068531588993881      
S/G/Y/R/B/O NT_010783AC104974591465192      
S/G/Y/R/B/O NT_010783AC002344592421151      
S/G/Y/R/B/O NT_010783AC091179592607783      
S/G/Y/R/B/O NT_010783AC009789593221013      
S/G/Y/R/B/O NT_010783AC091181595232762      
S/G/Y/R/B/O NT_010783AC015883596300993D17S95717180.001 AC015883
S/G/Y/R/B/O NT_010783AC007431597234653      
S/G/Y/R/B/O NT_010783AC005325598686943      
S/G/Y/R/B/O NT_010783AC069125600151201      
S/G/Y/R/B/O NT_010783AC015845600547501      
S/G/Y/R/B/O NT_010783AC004757602590383      
S/G/Y/R/B/O NT_010783AC005962603662243      
S/G/Y/R/B/O NT_010783AC004687604907813WI-605317183.001 AC004687, X15377
S/G/Y/R/B/O NT_010783AC023992606337803      
S/G/Y/R/B/O NT_010783AC005666607127303WI-204217182.001 AC005666
S/G/Y/R/B/O NT_010783AC011195608009551      
S/G/Y/R/B/O NT_010783AC021455608557131      
S/G/Y/R/B/O NT_010783AC068438608616501      
S/G/Y/R/B/O NT_010783AC025521608857801      
S/G/Y/R/B/O NT_010783AC002401610713843      


  NT_010783 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC004707612531773      
S/G/Y/R/B/O NT_010783AC021491613767623      
S/G/Y/R/B/O NT_010783AC004590615445873      
S/G/Y/R/B/O NT_010783AC005921616036573      
S/G/Y/R/B/O NT_010783AC091062617663363      
S/G/Y/R/B/O NT_010783AC005920619006953WI-955017150.001 AC005920
S/G/Y/R/B/O NT_010783AC005839620969173WI-761317152.001 AC005839, X75598
S/G/Y/R/B/O NT_010783AC006141622090943WI-59517151.001 AC006141
S/G/Y/R/B/O NT_010783AC006141622283573WI-831017154.001 AC006141
S/G/Y/R/B/O NT_010783AC005823623386663D17S187717153.001 AC005823
S/G/Y/R/B/O NT_010783AC005883624279803      
S/G/Y/R/B/O NT_010783AC002090626943283D17S94117157.001 AC002090
S/G/Y/R/B/O NT_010783AC016473627079553      
S/G/Y/R/B/O NT_010783AC004108627719493D17S95617155.001 AC026609
S/G/Y/R/B/O NT_010783AC004108627753573D17S80917156.001 AC004108, AC026609, AC073447
S/G/Y/R/B/O NT_010783AC006083628512963      
S/G/Y/R/B/O NT_010783AC026955631407043D17S78817158.001AC105361, AC026955, AC105361
S/G/Y/R/B/O NT_010783AC105361632917283AFM220YD417159.001 AC105361
S/G/Y/R/B/O NT_010783AC087714632960322      
S/G/Y/R/B/O NT_010783AC009222634929963D17S186517160.001AC024918, AC009222, AC024918
S/G/Y/R/B/O NT_010783AC024918635248273      
S/G/Y/R/B/O NT_010783AC087611636017763      
S/G/Y/R/B/O NT_010783AC067889636223332      
S/G/Y/R/B/O NT_010783AC102948637576893      
S/G/Y/R/B/O NT_010783 - WI-792617161.001AC026786, AC026786
S/G/Y/R/B/O NT_010783 - CHLC.GATA41C0517164.000  
S/G/Y/R/B/O NT_010783 - CHLC.GGAT14F0817179.000  
S/G/Y/R/B/O NT_010783 - WI-1013917184.001AC022732, AC022732
S/G/Y/R/B/O NT_010783 - WI-685717185.001AC005207, AC005207
S/G/Y/R/B/O NT_010783 - WI-949217186.001AC005207, AC005207
S/G/Y/R/B/O NT_010783 - CHLC.GATA11C1117195.001AL450447, AL450447