Home    Genome Browser    BLAT Search    Help
  Chromosome 19 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_025920 NT_030171 NT_038035 NT_011255 NT_011176 NT_031915 NT_011295 NT_033317
NT_038036 NT_038037 NT_025175 NT_011196 NT_011109 NT_011225 NT_011104


  NT_011255
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_011255AC0062738417093chr19NT_011255AC11270388667430000
S/G/Y/R/B/O NT_011255AC0062738417093chr19NT_038035AC1142728130803185750018575
S/G/Y/R/B/O NT_011255AC0062738417093chr19NT_038035AC1142728130803185750018575
S/G/Y/R/B/O NT_011255AC0062738417093  AC023583841709190181640540226060
S/G/Y/R/B/O NT_011255AC1127038866743chr19NT_011255AC00479989045230192901929
S/G/Y/R/B/O NT_011255AC0047998904523chr19NT_011255AC11270692475230083508350
S/G/Y/R/B/O NT_011255AC0047998904523  AC023583890452153424963959929904
S/G/Y/R/B/O NT_011255AC1127069247523chr19NT_011255AC00537998133136576006576
S/G/Y/R/B/O NT_011255AC1127069247523  AC0235839813312976965271408450380
S/G/Y/R/B/O NT_011255AC0053799813313chr19NT_011255AC005391102035839462009462
S/G/Y/R/B/O NT_011255AC0053799813313  AC0235831020358293230029323
S/G/Y/R/B/O NT_011255AC00539110203583chr19NT_011255AC004528105488333816003816
S/G/Y/R/B/O NT_011255AC00539110203583  AC023583981331203230020323
S/G/Y/R/B/O NT_011255AC00452810548833chr19NT_011255AC011558109813330190501905
S/G/Y/R/B/O NT_011255AC01155810981333chr19NT_011255AC093066113935630161301613
S/G/Y/R/B/O NT_011255AC09306611393563chr19NT_011255AC004151114279730120601206
S/G/Y/R/B/O NT_011255AC00415111427973chr19NT_011255AC005390117670730163701637
S/G/Y/R/B/O NT_011255AC00539011767073chr19NT_011255AC0930671214540300923923
S/G/Y/R/B/O NT_011255AC09306712145403chr19NT_011255AC120982121952030106301063
S/G/Y/R/B/O NT_011255AC12098212195203chr19NT_011255AC011544125063030015801580
S/G/Y/R/B/O NT_011255AC12098212195203  AC0115531250630316540031654
S/G/Y/R/B/O NT_011255AC01154412506303chr19NT_011255AC0042211294804300281281
S/G/Y/R/B/O NT_011255AC00422112948043chr19NT_011255AC004258133732832273002273
S/G/Y/R/B/O NT_011255AC00425813373283chr19NT_011255AC005330137135030029482948
S/G/Y/R/B/O NT_011255AC00533013713503chr19NT_011255AC0046231409446300235235
S/G/Y/R/B/O NT_011255AC00462314094463chr19NT_011255AC0053291446211305260526
S/G/Y/R/B/O NT_011255AC00532914462113chr19NT_011255AC027307148056030108801088
S/G/Y/R/B/O NT_011255AC02730714805603chr19NT_011255AC005943163304134377004377
S/G/Y/R/B/O NT_011255AC00594316330413chr19NT_011255AC005321167096530000
S/G/Y/R/B/O NT_011255AC00532116709653chr19NT_011255AC006274170960932630002630
S/G/Y/R/B/O NT_011255AC00627417096093chr19NT_011255AC112704174690332698002698
S/G/Y/R/B/O NT_011255AC11270417469033chr19NT_011255AC005619176131937410007410
S/G/Y/R/B/O NT_011255AC00561917613193chr19NT_011255AC005256179965532363002363
S/G/Y/R/B/O NT_011255AC00525617996553chr19NT_011255AC0047551836666304540454
S/G/Y/R/B/O NT_011255AC00475518366663chr19NT_011255AC0126151877371305240524
S/G/Y/R/B/O NT_011255AC01261518773713chr19NT_011255AC005306202609936859006859
S/G/Y/R/B/O NT_011255AC00530620260993chr19NT_011255AC0046782061788300566566
S/G/Y/R/B/O NT_011255AC00467820617883chr19NT_011255AC007136210008533509003509
S/G/Y/R/B/O NT_011255AC00713621000853chr19NT_011255AC0053282138841300907907
S/G/Y/R/B/O NT_011255AC00532821388413chr19NT_011255AC005545217285434683004683
S/G/Y/R/B/O NT_011255AC00554521728543chr19NT_011255AC005257221168530013981398
S/G/Y/R/B/O NT_011255AC00525722116853chr19NT_011255AC0934562248243300166166
S/G/Y/R/B/O NT_011255AC09345622482433chr19NT_011255AC0044902250589300111111
S/G/Y/R/B/O NT_011255AC00449022505893chr19NT_011255AC005263228962130121801218
S/G/Y/R/B/O NT_011255AC00526322896213chr19NT_011255AC004152232414030000
S/G/Y/R/B/O NT_011255AC00415223241403chr19NT_011255AC104530236173137266007266
S/G/Y/R/B/O NT_011255AC10453023617313chr19NT_011255AC005258237718530000
S/G/Y/R/B/O NT_011255AC00525823771853chr19NT_011255AC0044102409220300373373
S/G/Y/R/B/O NT_011255AC00441024092203chr19NT_011255AC098785244276430151801518
S/G/Y/R/B/O NT_011255AC09878524427643chr19NT_011255AC011542244478430114301143
S/G/Y/R/B/O NT_011255AC01154224447843chr19NT_011255AC011522248359935554005554
S/G/Y/R/B/O NT_011255AC01152224835993chr19NT_011255AC005624251976130014551455
S/G/Y/R/B/O NT_011255AC00562425197613chr19NT_011255AC005512255742132155002155
S/G/Y/R/B/O NT_011255AC00551225574213chr19NT_011255AC10453725994853220950022095
S/G/Y/R/B/O NT_011255AC10453725994853chr19NT_011255AC005756261080734952004952
S/G/Y/R/B/O NT_011255AC00575626108073chr19NT_011255AC09206826491543108320010832
S/G/Y/R/B/O NT_011255AC09206826491543chr19NT_011255AC104432271409530113701137
S/G/Y/R/B/O NT_011255AC09206826491543  AC0062752610807397910039791
S/G/Y/R/B/O NT_011255AC10443227140953chr19NT_011255AC006538271521430111701117
S/G/Y/R/B/O NT_011255AC00653827152143chr19NT_011255AC006130289163330199701997
S/G/Y/R/B/O NT_011255AC00653827152143  AJ0096112714095698380119971037
S/G/Y/R/B/O NT_011255AC00653827152143  AJ0096112714095698380119971037
S/G/Y/R/B/O NT_011255AC00613028916333chr19NT_011255AC11940329636293115240011524
S/G/Y/R/B/O NT_011255AC00613028916333  AJ009611296362911748615590119045
S/G/Y/R/B/O NT_011255AC00613028916333  AJ009611296362911748615590119045
S/G/Y/R/B/O NT_011255AC00613028916333  AJ009611296362911748615590119045
S/G/Y/R/B/O NT_011255AC00613028916333  AJ009611296362911748615590119045
S/G/Y/R/B/O NT_011255AC11940329636293chr19NT_011255AC011559296371530000
S/G/Y/R/B/O NT_011255AC11940329636293  AJ0096112891633146701558016228
S/G/Y/R/B/O NT_011255AC11940329636293  AJ0096112891633146701558016228
S/G/Y/R/B/O NT_011255AC01155929637153chr19NT_011255AC0062773006380305520552
S/G/Y/R/B/O NT_011255AC00627730063803chr19NT_011255AC007766304847032676002676
S/G/Y/R/B/O NT_011255AC00776630484703chr19NT_011255AC011549308563238868008868
S/G/Y/R/B/O NT_011255AC01154930856323chr19NT_011255AC0930533116710300130130
S/G/Y/R/B/O NT_011255AC09305331167103chr19NT_011255AC005944311956930013141314
S/G/Y/R/B/O NT_011255AC00594431195693chr19NT_011255AC104526316033030000
S/G/Y/R/B/O NT_011255AC10452631603303chr19NT_011255AC0052623163295300585585
S/G/Y/R/B/O NT_011255AC00526231632953chr19NT_011255AC005264320684036655006655
S/G/Y/R/B/O NT_011255AC00526231632953  AC02472132068401448801949733985
S/G/Y/R/B/O NT_011255AC00526432068403chr19NT_011255AC011547323935730116101161
S/G/Y/R/B/O NT_011255AC00526432068403  AC0247213239357123580290915267
S/G/Y/R/B/O NT_011255AC01154732393573chr19NT_011255AC005331327931933414003414
S/G/Y/R/B/O NT_011255AC00533132793193chr19NT_011255AC006505331146930205802058
S/G/Y/R/B/O NT_011255AC00650533114693chr19NT_011255AC123911334590332315002315
S/G/Y/R/B/O NT_011255AC12391133459033chr19NT_011255AC010649335342130038753875
S/G/Y/R/B/O NT_011255AC01064933534213chr19NT_011255AC104524338670933116003116
S/G/Y/R/B/O NT_011255AC10452433867093chr19NT_011255AC007792340067630000
S/G/Y/R/B/O NT_011255AC00779234006763chr19NT_011255AC005514343045736392006392
S/G/Y/R/B/O NT_011255AC00551434304573chr19NT_011255AC104104346663730114601146
S/G/Y/R/B/O NT_011255AC10410434666373chr19NT_011255AC005778347666530000
S/G/Y/R/B/O NT_011255AC00577834766653chr19NT_011255AC0930773519712300669669
S/G/Y/R/B/O NT_011255AC09307735197123chr19NT_011255AC005551352286130193601936
S/G/Y/R/B/O NT_011255AC00555135228613chr19NT_011255AC093052356334130148901489
S/G/Y/R/B/O NT_011255AC09305235633413chr19NT_011255AC005787356701230101701017
S/G/Y/R/B/O NT_011255AC00578735670123chr19NT_011255AC005786360930835901005901
S/G/Y/R/B/O NT_011255AC00578636093083chr19NT_011255AC116968364832030176901769
S/G/Y/R/B/O NT_011255AC11696836483203chr19NT_011255AC005175366359330000
S/G/Y/R/B/O NT_011255AC00517536635933chr19NT_011255AC005542369423430081548154
S/G/Y/R/B/O NT_011255AC00517536635933  AC0684753694234331311980311538226
S/G/Y/R/B/O NT_011255AC00554236942343chr19NT_011255AC093071372387230124201242
S/G/Y/R/B/O NT_011255AC00554236942343  AC06847536635932078119461323635963
S/G/Y/R/B/O NT_011255AC09307137238723chr19NT_011255AC004637373053530137201372
S/G/Y/R/B/O NT_011255AC00463737305353chr19NT_011255AC006125377062230049444944
S/G/Y/R/B/O NT_011255AC00463737305353  AC0684753770622313922780136635538
S/G/Y/R/B/O NT_011255AC00612537706223chr19NT_011255AC005954380105933767003767
S/G/Y/R/B/O NT_011255AC00612537706223  AC0684753801059113835893538022656
S/G/Y/R/B/O NT_011255AC00595438010593chr19NT_011255AC005777383451730192901929
S/G/Y/R/B/O NT_011255AC00595438010593  AC0684753770622186643446352225632
S/G/Y/R/B/O NT_011255AC00577738345173chr19NT_011255AC004598387577830141601416
S/G/Y/R/B/O NT_011255AC00459838757783chr19NT_011255AC09307839154953119420011942
S/G/Y/R/B/O NT_011255AC09307839154953chr19NT_011255AC01148839454503002552925529
S/G/Y/R/B/O NT_011255AC09307839154953  AC0342013945450233471585024932
S/G/Y/R/B/O NT_011255AC09307839154953  AC1227043945450369390036939
S/G/Y/R/B/O NT_011255AC01148839454503chr19NT_011255AC016586405401430095679567
S/G/Y/R/B/O NT_011255AC01148839454503  AC03420140540143412515851833854048
S/G/Y/R/B/O NT_011255AC01658640540143chr19NT_011255AC006930424988236389006389
S/G/Y/R/B/O NT_011255AC01658640540143  AC0056203915495401820040182
S/G/Y/R/B/O NT_011255AC01658640540143  AC0056203915495401820040182
S/G/Y/R/B/O NT_011255AC01658640540143  AC0272723945450687362965508776788
S/G/Y/R/B/O NT_011255AC01658640540143  AC0272723945450687362965508776788
S/G/Y/R/B/O NT_011255AC00693042498823chr19NT_011255AC005578428454137941007941
S/G/Y/R/B/O NT_011255AC00693042498823  AC02727240540141679802353540333
S/G/Y/R/B/O NT_011255AC00557842845413chr19NT_011255AC008616431989730157201572
S/G/Y/R/B/O NT_011255AC00557842845413  AC027272431989720988984021972
S/G/Y/R/B/O NT_011255AC00861643198973chr19NT_011255AC104521439452514554702886974416
S/G/Y/R/B/O NT_011255AC10452143945251chr19NT_011255AC00729244054763693218621347222266
S/G/Y/R/B/O NT_011255AC00729244054763chr19NT_011255AC011498444514638166008166
S/G/Y/R/B/O NT_011255AC00729244054763  AF1904654394525172540017254
S/G/Y/R/B/O NT_011255AC01149844451463chr19NT_011255AC005339471038138994008994
S/G/Y/R/B/O NT_011255AC01149844451463  AF1904654405476870580087058
S/G/Y/R/B/O NT_011255AC00533947103813chr19NT_011255AC005594473374635516005516
S/G/Y/R/B/O NT_011255AC00559447337463chr19NT_011255AC005783476774430180401804
S/G/Y/R/B/O NT_011255AC00578347677443chr19NT_011255AC006537480944130056995699
S/G/Y/R/B/O NT_011255AC00653748094413chr19NT_011255AC005523484179936049006049
S/G/Y/R/B/O NT_011255AC00552348417993chr19NT_011255AC027319487721830069616961
S/G/Y/R/B/O NT_011255AC02731948772183chr19NT_011255AC104525502180732137002137
S/G/Y/R/B/O NT_011255AC02731948772183  AC01911448417994505101352458575
S/G/Y/R/B/O NT_011255AC10452550218073chr19NT_011255AC05346750374983115840011584
S/G/Y/R/B/O NT_011255AC10452550218073  AC0191145021807128430012843
S/G/Y/R/B/O NT_011255AC05346750374983chr19NT_011255AC10452050673213001019410194
S/G/Y/R/B/O NT_011255AC05346750374983  AC0191145037498276590619133850
S/G/Y/R/B/O NT_011255AC10452050673213chr19NT_011255AC00559550884003132190013219
S/G/Y/R/B/O NT_011255AC10452050673213  AC01911450884001013101176021891
S/G/Y/R/B/O NT_011255AC00559550884003chr19NT_011255AC093033511448330000
S/G/Y/R/B/O NT_011255AC00559550884003  AC0191145037498223451815341127571
S/G/Y/R/B/O NT_011255AC09303351144833chr19NT_011255AC022517511640430155501555
S/G/Y/R/B/O NT_011255AC02251751164043chr19NT_011255AC11853552724123163770016377
S/G/Y/R/B/O NT_011255AC02251751164043  AC021618511640490720442137015132156
S/G/Y/R/B/O NT_011255AC11853552724123chr19NT_011255AC00578852888913129490012949
S/G/Y/R/B/O NT_011255AC00578852888913chr19NT_011255AC005338531216637136007136
S/G/Y/R/B/O NT_011255AC00533853121663chr19NT_011255AC005790533957130020752075
S/G/Y/R/B/O NT_011255AC00579053395713chr19NT_011255AC005335537657436233006233
S/G/Y/R/B/O NT_011255AC00533553765743chr19NT_011255AC01149054173443001074810748
S/G/Y/R/B/O NT_011255AC01149054173443chr19NT_011255AC00576455216673102520010252
S/G/Y/R/B/O NT_011255AC01149054173443  AC023217552166712514251949315526
S/G/Y/R/B/O NT_011255AC00576455216673chr19NT_011255AC004560554944338040008040
S/G/Y/R/B/O NT_011255AC00576455216673  AC0232175417344126475496343921582
S/G/Y/R/B/O NT_011255AC00456055494433chr19NT_011255AC005765558408430000
S/G/Y/R/B/O NT_011255AC00576555840843chr19NT_011255AC011533561857830000
S/G/Y/R/B/O NT_011255AC00576555840843  AC0232175521667214111557594328911
S/G/Y/R/B/O NT_011255AC01153356185783chr19NT_011255AC093059564608630130701307
S/G/Y/R/B/O NT_011255AC09305956460863chr19NT_011255AC004611564981030126301263
S/G/Y/R/B/O NT_011255AC00461156498103chr19NT_011255AC0114995695602300365365
S/G/Y/R/B/O NT_011255AC00461156498103  AC1343035646086151550015155
S/G/Y/R/B/O NT_011255AC00461156498103  AC1343035646086151550015155
S/G/Y/R/B/O NT_011255AC00461156498103  AL3563525646086266750026675
S/G/Y/R/B/O NT_011255AC01149956956023chr19NT_011255AC024592589501335991005991
S/G/Y/R/B/O NT_011255AC01149956956023  AL356352589501374168222554846131239
S/G/Y/R/B/O NT_011255AC02459258950133chr19NT_011255AC104532596989330020062006
S/G/Y/R/B/O NT_011255AC10453259698933chr19NT_011255AC004602598425630098799879
S/G/Y/R/B/O NT_011255AC00460259842563chr19NT_011255AC093050601684430122601226
S/G/Y/R/B/O NT_011255AC00460259842563  AC0211655895013297140491234626
S/G/Y/R/B/O NT_011255AC09305060168443chr19NT_011255AC005784602411930121701217
S/G/Y/R/B/O NT_011255AC00578460241193chr19NT_011255AC01144460649323135060013506
S/G/Y/R/B/O NT_011255AC01144460649323chr19NT_011255AC10453861865533338040033804
S/G/Y/R/B/O NT_011255AC01144460649323  AL15915761865531445825153165748630
S/G/Y/R/B/O NT_011255AC10453861865533chr19NT_011255AC011471620713330234502345
S/G/Y/R/B/O NT_011255AC01147162071333chr19NT_011255AC114268635949030000
S/G/Y/R/B/O NT_011255AC11426863594903chr19NT_011255AC011491637811630000
S/G/Y/R/B/O NT_011255AC01149163781163chr19NT_011255AC011539648594132841002841
S/G/Y/R/B/O NT_011255AC01153964859413chr19NT_011255AC01050365243183193570019357
S/G/Y/R/B/O NT_011255AC01050365243183chr19NT_011255AC00876066462303132300013230
S/G/Y/R/B/O NT_011255AC01050365243183  AC016331648594144721103603730092381
S/G/Y/R/B/O NT_011255AC00876066462303chr19NT_011255AC02095468331283148430014843
S/G/Y/R/B/O NT_011255AC00876066462303  AC0085766485941113871226557918192
S/G/Y/R/B/O NT_011255AC00876066462303  AC025343683312875950857023764108284
S/G/Y/R/B/O NT_011255AC00876066462303  AC0277266833128211891773290725869
S/G/Y/R/B/O NT_011255AC02095468331283chr19NT_011255AC02215668581393127640012764
S/G/Y/R/B/O NT_011255AC02095468331283  AC0277266858139255511790344330784
S/G/Y/R/B/O NT_011255AC02215668581393chr19NT_011255AC010647687930630411304113
S/G/Y/R/B/O NT_011255AC01064768793063chr19NT_011255AC020895691529530000
S/G/Y/R/B/O NT_011255AC02089569152953chr19NT_011255AC025278701764230000
S/G/Y/R/B/O NT_011255AC02089569152953  AC00857668581392584561693130163315
S/G/Y/R/B/O NT_011255AC02089569152953  AC02772668581391148902135632845
S/G/Y/R/B/O NT_011255AC02527870176423         
S/G/Y/R/B/O NT_011255AC02527870176423  AC00857668581391323741661591933322
S/G/Y/R/B/O NT_011255AC02527870176423  AC1193987122430244714694227931444