Home    Genome Browser    BLAT Search    Help
  Chromosome 6 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_034880 NT_007592 NT_033172 NT_034881 NT_033948 NT_007540 NT_007299 NT_019424
NT_033944 NT_025741 NT_023451 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007540
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_007540AL049551621547593chr6NT_007540AL3561356221999630000
S/G/Y/R/B/O NT_007540AL356135622199963chr6NT_007540AL0495446228872330000
S/G/Y/R/B/O NT_007540AL049544622887233chr6NT_007540AL39164462392233300100100
S/G/Y/R/B/O NT_007540AL391644623922333chr6NT_007540AL1334596245774630000
S/G/Y/R/B/O NT_007540AL133459624577463chr6NT_007540AL3553476255731230000
S/G/Y/R/B/O NT_007540AL355347625573123chr6NT_007540AL5902026264351030000
S/G/Y/R/B/O NT_007540AL355347625573123  AC068460622887231143002015131581
S/G/Y/R/B/O NT_007540AL590202626435103chr6NT_007540AL3602206264700130000
S/G/Y/R/B/O NT_007540AL360220626470013chr6NT_007540AL1614406275494530000
S/G/Y/R/B/O NT_007540AL360220626470013  AC06778662288723936011665095266
S/G/Y/R/B/O NT_007540AL161440627549453chr6NT_007540AL13888262836625300100100
S/G/Y/R/B/O NT_007540AL161440627549453  AC06830462288723453450045345
S/G/Y/R/B/O NT_007540AL138882628366253chr6NT_007540Z930216291203730000
S/G/Y/R/B/O NT_007540AL138882628366253  AC00744662836625753930075393
S/G/Y/R/B/O NT_007540AL138882628366253  AC06830462836625752200075220
S/G/Y/R/B/O NT_007540Z93021629120373chr6NT_007540AL5896826302862230000
S/G/Y/R/B/O NT_007540AL589682630286223chr6NT_007540AL4511086308213230000
S/G/Y/R/B/O NT_007540AL589682630286223  AC02499262754945217570021757
S/G/Y/R/B/O NT_007540AL451108630821323chr6NT_007540AL3553756312587130000
S/G/Y/R/B/O NT_007540AL355375631258713chr6NT_007540AL589736633292723009191
S/G/Y/R/B/O NT_007540AL589736633292723chr6NT_007540AL1219316338266330000
S/G/Y/R/B/O NT_007540AL121931633826633chr6NT_007540AL5906456351631430000
S/G/Y/R/B/O NT_007540AL121931633826633  AL356427631258712311028381439040338
S/G/Y/R/B/O NT_007540AL590645635163143chr6NT_007540AL5905586358596332000002000
S/G/Y/R/B/O NT_007540AL590558635859633chr6NT_007540AL3596756368479130200002000
S/G/Y/R/B/O NT_007540AL359675636847913chr6NT_007540AL45034663793692300100100
S/G/Y/R/B/O NT_007540AL450346637936923chr6NT_007540AL59045663962059300100100
S/G/Y/R/B/O NT_007540AL450346637936923  AC02138663585963763580143977797
S/G/Y/R/B/O NT_007540AL450346637936923  AC0271966358596366974126051206591644
S/G/Y/R/B/O NT_007540AL590456639620593chr6NT_007540AL12194964001897300100100
S/G/Y/R/B/O NT_007540AL590456639620593  AC06791563962059389700038970
S/G/Y/R/B/O NT_007540AL121949640018973chr6NT_007540AL3908546414208430000
S/G/Y/R/B/O NT_007540AL121949640018973  AC06791563793692306475180428540112
S/G/Y/R/B/O NT_007540AL121949640018973  AC073286637936921678049431583237555
S/G/Y/R/B/O NT_007540AL390854641420843chr6NT_007540AL1359056416844330000
S/G/Y/R/B/O NT_007540AL390854641420843  AC02265663962059216060279724403
S/G/Y/R/B/O NT_007540AL135905641684433chr6NT_007540AL5130436428678230000
S/G/Y/R/B/O NT_007540AL135905641684433  AC022656639620597127444111167387358
S/G/Y/R/B/O NT_007540AL135905641684433  AC023349639620591404553913165251088
S/G/Y/R/B/O NT_007540AL513043642867823chr6NT_007540AL44567664327763300100100
S/G/Y/R/B/O NT_007540AL445676643277633chr6NT_007540AL0503296434117130000
S/G/Y/R/B/O NT_007540AL445676643277633  AL35471964327763135080013508
S/G/Y/R/B/O NT_007540AL050329643411713chr6NT_007540AL44567764427725300100100
S/G/Y/R/B/O NT_007540AL050329643411713  AL35471964286782866250086625
S/G/Y/R/B/O NT_007540AL445677644277253chr6NT_007540AL3549136451235730000
S/G/Y/R/B/O NT_007540AL354913645123573chr6NT_007540AL5905466461849032000002000
S/G/Y/R/B/O NT_007540AL354913645123573  AC02294964341171662170066217
S/G/Y/R/B/O NT_007540AL590546646184903chr6NT_007540AL5907846468945230200002000
S/G/Y/R/B/O NT_007540AL590546646184903  AC02294964618490582160296561181
S/G/Y/R/B/O NT_007540AL590784646894523chr6NT_007540AL6037676484467230199801998
S/G/Y/R/B/O NT_007540AL590784646894523  AL6037626461849010934700109347
S/G/Y/R/B/O NT_007540AL603767648446723chr6NT_007540AL0785976494054930198701987
S/G/Y/R/B/O NT_007540AL603767648446723  AL60376264689452388890038889
S/G/Y/R/B/O NT_007540AL078597649405493chr6NT_007540AL3573756507675830000
S/G/Y/R/B/O NT_007540AL357375650767583chr6NT_007540AL3564546512699030000
S/G/Y/R/B/O NT_007540AL356454651269903chr6NT_007540AL35535765301223300100100
S/G/Y/R/B/O NT_007540AL356454651269903  AL160003648446729735020851915101350
S/G/Y/R/B/O NT_007540AL355357653012233chr6NT_007540AL45032465417384300100100
S/G/Y/R/B/O NT_007540AL450324654173843chr6NT_007540AL1370076551913030000
S/G/Y/R/B/O NT_007540AL137007655191303chr6NT_007540AL1099226562480930000
S/G/Y/R/B/O NT_007540AL109922656248093chr6NT_007540AL4503946571929430000
S/G/Y/R/B/O NT_007540AL450394657192943chr6NT_007540AL35366965758282300100100
S/G/Y/R/B/O NT_007540AL450394657192943  AC02505065301223215090972031229
S/G/Y/R/B/O NT_007540AL353669657582823chr6NT_007540AL1333226578062730000
S/G/Y/R/B/O NT_007540AL353669657582823  AC02505065758282119760011976
S/G/Y/R/B/O NT_007540AL133322657806273chr6NT_007540AL36521765953151300100100
S/G/Y/R/B/O NT_007540AL133322657806273  AC0250506571929475001268153437131119
S/G/Y/R/B/O NT_007540AL365217659531513chr6NT_007540AL58991666058008300100100
S/G/Y/R/B/O NT_007540AL365217659531513  AC026943659531511024466640103110
S/G/Y/R/B/O NT_007540AL365217659531513  AL39078265780627936773840097517
S/G/Y/R/B/O NT_007540AL589916660580083chr6NT_007540AL13276766090183300100100
S/G/Y/R/B/O NT_007540AL132767660901833chr6NT_007540AL10961266109680300100100
S/G/Y/R/B/O NT_007540AL109612661096803chr6NT_007540AL35315366215853300100100
S/G/Y/R/B/O NT_007540AL353153662158533chr6NT_007540AL45031966311183300103103
S/G/Y/R/B/O NT_007540AL353153662158533  AC02448066215853281090114129250
S/G/Y/R/B/O NT_007540AL450319663111833chr6NT_007540AL4510556643396230000
S/G/Y/R/B/O NT_007540AL450319663111833  AC02448066311183656292757951377899
S/G/Y/R/B/O NT_007540AL451055664339623chr6NT_007540AL3915006645963830000
S/G/Y/R/B/O NT_007540AL391500664596383chr6NT_007540AL5134926662885832000002000
S/G/Y/R/B/O NT_007540AL513492666288583chr6NT_007540AL0498426674053530199801998
S/G/Y/R/B/O NT_007540AL513492666288583  AC023369666288586190916626491383448
S/G/Y/R/B/O NT_007540AL049842667405353chr6NT_007540AL13279366819372300100100
S/G/Y/R/B/O NT_007540AL049842667405353  AC02336966459638182480993028178
S/G/Y/R/B/O NT_007540AL049842667405353  AL365442668193721508628981155129535
S/G/Y/R/B/O NT_007540AL132793668193723chr6NT_007540AC0024856693980730000
S/G/Y/R/B/O NT_007540AL132793668193723  AL365442667405351336610099734430809
S/G/Y/R/B/O NT_007540AC002485669398073chr6NT_007540AL45016467087332300100100
S/G/Y/R/B/O NT_007540AC002485669398073  AC0557876674053523888107851461849291
S/G/Y/R/B/O NT_007540AL450164670873323chr6NT_007540AL1393346721228330000
S/G/Y/R/B/O NT_007540AL450164670873323  AC0557876693980738131179561737273459
S/G/Y/R/B/O NT_007540AL139334672122833chr6NT_007540AL45033667314193300100100
S/G/Y/R/B/O NT_007540AL139334672122833  AL59100167314193405800040580
S/G/Y/R/B/O NT_007540AL450336673141933chr6NT_007540AL59067367439600300100100
S/G/Y/R/B/O NT_007540AL450336673141933  AL5910016743960012550300125503
S/G/Y/R/B/O NT_007540AL590673674396003chr6NT_007540AL5909956756273632000002000
S/G/Y/R/B/O NT_007540AL590673674396003  AL59100167562736102680010268
S/G/Y/R/B/O NT_007540AL590995675627363chr6NT_007540AL5906786767409830000
S/G/Y/R/B/O NT_007540AL590678676740983chr6NT_007540AL5908746782194730199301993
S/G/Y/R/B/O NT_007540AL590678676740983  AC019132674396005624627021400272950
S/G/Y/R/B/O NT_007540AL590874678219473chr6NT_007540AL5910046783803930000
S/G/Y/R/B/O NT_007540AL591004678380393chr6NT_007540AL5920816799588430000
S/G/Y/R/B/O NT_007540AL591004678380393  AC01913267674098104420010442
S/G/Y/R/B/O NT_007540AL591004678380393  AC0212146767409893140010759103899
S/G/Y/R/B/O NT_007540AL592081679958843chr6NT_007540AL5916056799787830000
S/G/Y/R/B/O NT_007540AL591605679978783chr6NT_007540AL3655036813337232000002000
S/G/Y/R/B/O NT_007540AL591605679978783  AC01684867674098616140061614
S/G/Y/R/B/O NT_007540AL365503681333723chr6NT_007540AL0498606823702930000
S/G/Y/R/B/O NT_007540AL365503681333723  AC01684868133372869240086924
S/G/Y/R/B/O NT_007540AL049860682370293chr6NT_007540AL5123686833339630000
S/G/Y/R/B/O NT_007540AL512368683333963         
S/G/Y/R/B/O NT_007540AL512368683333963  AL51245567997878569630056963