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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_025323 | AC078988 | 27019853 | 3 | chrX | NT_025323 | AC108358 | 27189702 | 3 | 0 | 1996 | 0 | 1996 |
S/G/Y/R/B/O |
NT_025323 | AC108358 | 27189702 | 3 | chrX | NT_025323 | AC112495 | 27231338 | 3 | 0 | 0 | 1873 | 1873 |
S/G/Y/R/B/O |
NT_025323 | AC108358 | 27189702 | 3 |   |   | AC119033 | 27231338 | | 14235 | 2186 | 0 | 16421 |
S/G/Y/R/B/O |
NT_025323 | AC112495 | 27231338 | 3 | chrX | NT_025323 | AC002367 | 27321650 | 3 | 0 | 1998 | 0 | 1998 |
S/G/Y/R/B/O |
NT_025323 | AC112495 | 27231338 | 3 |   |   | AC019165 | 27321650 | | 61884 | 1767 | 9899 | 73550 |
S/G/Y/R/B/O |
NT_025323 | AC112495 | 27231338 | 3 |   |   | AC113223 | 27189702 | | 92309 | 0 | 0 | 92309 |
S/G/Y/R/B/O |
NT_025323 | AC112495 | 27231338 | 3 |   |   | AC119033 | 27189702 | | 15967 | 5487 | 15245 | 36699 |
S/G/Y/R/B/O |
NT_025323 | AC002367 | 27321650 | 3 | chrX | NT_025323 | AC121343 | 27468250 | 3 | 2027 | 0 | 0 | 2027 |
S/G/Y/R/B/O |
NT_025323 | AC002367 | 27321650 | 3 |   |   | AC019165 | 27189702 | | 50374 | 2940 | 20347 | 73661 |
S/G/Y/R/B/O |
NT_025323 | AC002367 | 27321650 | 3 |   |   | AC113223 | 27231338 | | 43700 | 0 | 0 | 43700 |
S/G/Y/R/B/O |
NT_025323 | AC121343 | 27468250 | 3 | chrX | NT_025323 | AC003659 | 27630223 | 1 | 129725 | 0 | 13269 | 142994 |
S/G/Y/R/B/O |
NT_025323 | AC121343 | 27468250 | 3 |   |   | AC023037 | 27630223 | | 24278 | 2491 | 0 | 26769 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 | chrX | NT_025323 | AC121344 | 27648509 | 3 | 9688 | 1615 | 0 | 11303 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 | chr12 | NT_009770 | AC005805 | 110874790 | 1 | 12011 | 0 | 929 | 12940 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 | chr12 | NT_009770 | AC005805 | 110874790 | 1 | 12011 | 0 | 929 | 12940 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 | chr12 | NT_009770 | AC005805 | 110874790 | 1 | 12011 | 0 | 929 | 12940 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 | chr12 | NT_009770 | AC005805 | 110874790 | 1 | 12011 | 0 | 929 | 12940 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 |   |   | AC002989 | 110856338 | | 14001 | 0 | 1773 | 15774 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 |   |   | AC002989 | 110856338 | | 14001 | 0 | 1773 | 15774 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 |   |   | AC023037 | 4211840 | | 48174 | 4595 | 13539 | 66308 |
S/G/Y/R/B/O |
NT_025323 | AC003659 | 27630223 | 1 |   |   | AC023037 | 4211840 | | 48174 | 4595 | 13539 | 66308 |
S/G/Y/R/B/O |
NT_025323 | AC121344 | 27648509 | 3 | chrX | NT_025323 | AL008710 | 27760009 | 3 | 0 | 0 | 1669 | 1669 |
S/G/Y/R/B/O |
NT_025323 | AC121344 | 27648509 | 3 |   |   | AC023037 | 27630223 | | 16427 | 0 | 0 | 16427 |
S/G/Y/R/B/O |
NT_025323 | AC121344 | 27648509 | 3 |   |   | AC026531 | 27630223 | | 44273 | 0 | 0 | 44273 |
S/G/Y/R/B/O |
NT_025323 | AL008710 | 27760009 | 3 | chrX | NT_025323 | AL031803 | 27855142 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_025323 | AL008710 | 27760009 | 3 |   |   | AC026531 | 27760009 | | 53474 | 0 | 32612 | 86086 |
S/G/Y/R/B/O |
NT_025323 | AL031803 | 27855142 | 3 | chrX | NT_025323 | AL049178 | 27907400 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_025323 | AL031803 | 27855142 | 3 |   |   | AC026531 | 27855142 | | 10010 | 2060 | 0 | 12070 |
S/G/Y/R/B/O |
NT_025323 | AL049178 | 27907400 | 3 | chrX | NT_025323 | AL031466 | 27911523 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_025323 | AL031466 | 27911523 | 3 |   |   |   |   |   |   |   |   |   |
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