Home    Genome Browser    BLAT Search    Help
  Chromosome 6 - BAC End Pairs - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main BAC End Pairs Page Whole Chromosome Single Contigs

Line color code:

  • White: lists number of confirming clone bridges for this accession
  • Blue: clone bridges two adjacent contigs
  • Green: clone bridges close contigs
  • Pink: multiple clones bridge distant regions on same chromosome
  • Red: multiple clones bridge regions on different chromosomes
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_033943
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_033943AL121958704545853         19 confirm
S/G/Y/R/B/O NT_033943AL121958705326793AQ4794581chr5NT_023097AC025779200916172AQ479456-1RP11-232C6
S/G/Y/R/B/O NT_033943AL121958705613323B637501chr5NT_023097AC091946200989751B63749-1RP11-3D18
S/G/Y/R/B/O NT_033943AL121958705732993AQ6733271chr5NT_023097AC018883201268551AQ664428-1RP11-1056J1
S/G/Y/R/B/O NT_033943AL121958705607933AQ532021-1chr6NT_007592AL121975636295233AQ5320231RP11-352H7
S/G/Y/R/B/O NT_033943AL121958704911003AQ558962-1chr6NT_007592AL121975636466643AQ7534971CTD-2071L3
S/G/Y/R/B/O NT_033943AL121958705608073AQ435431-1chr6NT_007592AL121975636487723AQ6149461RP11-718B7
S/G/Y/R/B/O NT_033943AL121958705720773AQ340867-1chr6NT_007592AL121975636487983AQ3406481RP11-598P7
S/G/Y/R/B/O NT_033943AL121958705112063AQ112230-1chr6NT_007592AL121975636606833AQ1122321CTD-2371L14
S/G/Y/R/B/O NT_033943AL121958705808733AQ529338-1chr6NT_007592AL121975636637223AQ5293411RP11-346L9
S/G/Y/R/B/O NT_033943AL121958705760043AQ312445-1chr6NT_007592AL121975636691193AQ3124481RP11-102G20
S/G/Y/R/B/O NT_033943AL121958705717863AQ533934-1chr6NT_007592AL121975636705303AQ5339361RP11-379P12
S/G/Y/R/B/O NT_033943AL121958705607883AQ318562-1chr6NT_007592AL121975636805343AQ3185641RP11-98N7
S/G/Y/R/B/O NT_033943AL121958705688583AQ491610-1chr6NT_007592AL121975636818493AQ4916121RP11-231D18
S/G/Y/R/B/O NT_033943AL121958705268953AQ427588-1chr6NT_007592AL121975636821193AQ4275851CTD-2577M7
S/G/Y/R/B/O NT_033943AL121958705077053AQ568524-1chr6NT_007592AL121975636866503AQ5573301CTD-2088E24
S/G/Y/R/B/O NT_033943AL121958705151253AQ010284-1chr6NT_007592AL121975636910163B934761CTD-2172F21
S/G/Y/R/B/O NT_033943AL121958705206943B43887-1chr6NT_007592AL121975637017863B438861CTC-780O2
S/G/Y/R/B/O NT_033943AL121958705198143AQ114277-1chr6NT_007592AL121975637087933AQ1142811CTD-2374O21
S/G/Y/R/B/O NT_033943AL121958704663953AQ141424-1chr6NT_007592AL121975637274703AQ1672481CTD-3171O1
S/G/Y/R/B/O NT_033943AL121958705867013AQ351979-1chr6NT_007592AL121975636818423AQ3519801CTD-2540A9
S/G/Y/R/B/O NT_033943AL137184705929963         18 confirm
S/G/Y/R/B/O NT_033943AL137184706720603AQ4020101chr10NT_030066AC024527476488991AQ4028711RP11-624H3
S/G/Y/R/B/O NT_033943AL137184706578663AQ3138211chr10NT_030066AC024527476573071AQ3138191RP11-94K5
S/G/Y/R/B/O NT_033943AL137184706334593AQ0203251chr5NT_023097AC025779201101102AQ020326-1CTD-2301A24
S/G/Y/R/B/O NT_033943AL137184706613413AQ0084661chr5NT_023097AC018883201320311AQ001493-1CTD-2280O2
S/G/Y/R/B/O NT_033943AL137184706578873AQ2225351chr5NT_023097AC018883201537551AQ216162-1CTD-3252J13
S/G/Y/R/B/O NT_033943AL137184706578873AQ2225351chr5NT_006497AC010217638937553AQ216162-1CTD-3252J13
S/G/Y/R/B/O NT_033943AL137184706613413AQ0084661chr5NT_006497AC093280639074591AQ001493-1CTD-2280O2
S/G/Y/R/B/O NT_033943AL137184706578873AQ2225351chr5NT_006497AC010237643192463AQ216162-1CTD-3252J13
S/G/Y/R/B/O NT_033943AL137184706720603AQ4020101chr6NT_007592AL591044331865993AQ4028711RP11-624H3
S/G/Y/R/B/O NT_033943AL137184706578663AQ3138211chr6NT_007592AL591044332701203AQ313819-1RP11-94K5
S/G/Y/R/B/O NT_033943AL137184706578663AQ3138211chr6NT_033172AL021368715832473AQ313819-1RP11-94K5
S/G/Y/R/B/O NT_033943AL137184706720603AQ4020101chr6NT_033172AL021368715916573AQ402871-1RP11-624H3
S/G/Y/R/B/O NT_033943AL137184706905173AQ4739391chr6NT_033172AL021368716059373AQ473942-1CTD-2573H23
S/G/Y/R/B/O NT_033943AL137184706578663AQ3138211chr6NT_007592AL591044331950133AQ3138191RP11-94K5
S/G/Y/R/B/O NT_033943AL590227707029653         13 confirm
S/G/Y/R/B/O NT_033943AL590227707081823AQ2760921chr6NT_007592AL591044332959003AQ276089-1CTD-2524O13
S/G/Y/R/B/O NT_033943AL590227707074953AQ4703961chr6NT_033172AL021368716051873AQ470399-1CTD-2588N5
S/G/Y/R/B/O NT_033943AL590227707081823AQ2760921chr6NT_033172AL021368716408593AQ276089-1CTD-2524O13
S/G/Y/R/B/O NT_033943AL590227707081823AQ4214611chr6NT_033172AL021368716250543AQ421462-1RP11-206E15
S/G/Y/R/B/O NT_033943AL590227707082033AQ5521491chr6NT_033172AL021368716614403AQ552147-1RP11-419E22
S/G/Y/R/B/O NT_033943AL590227707714533AQ3386031chr6NT_033172AL390237717975803AQ032592-1CTD-2202F11
S/G/Y/R/B/O NT_033943AL590227707714533AQ3386031chr6NT_033946AC026139728243721AQ0325921CTD-2202F11
S/G/Y/R/B/O NT_033943AL590227707788293AQ5237521chr6NT_033946AC026139727948861AQ4629881RP11-797O23
S/G/Y/R/B/O NT_033943AL590227708288623B825011chr6NT_033172AL390237718891143B82500-1RP11-16H10
S/G/Y/R/B/O NT_033943AL590227708288623B825011chr6NT_033946AC026139728899431B825001RP11-16H10
S/G/Y/R/B/O NT_033943AL590227708297203AQ0599881chr6NT_033172AL390237719026973AQ059990-1CTD-2349P10
S/G/Y/R/B/O NT_033943AL590227708297203AQ0599881chr6NT_033946AC026139728765991AQ0599901CTD-2349P10
S/G/Y/R/B/O NT_033943AL590227708369973AQ6359561chr6NT_033172AL390237718890503AQ635955-1RP11-464P16


  NT_033943 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_033943AL590227708369973AQ6359561chr6NT_033946AC026139728900381AQ6359551RP11-464P16
S/G/Y/R/B/O NT_033943AL512427708389923         11 confirm
S/G/Y/R/B/O NT_033943AL512427708542953AQ344113-1chr5NT_006497AC010217638946593AQ3441101RP11-124N9
S/G/Y/R/B/O NT_033943AL512427708542953AQ344113-1chr5NT_006497AC010237643201503AQ3441101RP11-124N9
S/G/Y/R/B/O NT_033943AL512427708616903AQ040559-1chr6NT_007592AL133255333200233AQ0405291CTD-2317O1
S/G/Y/R/B/O NT_033943AL512427708616903AQ040559-1chr6NT_033172AL021368716641363AQ0405291CTD-2317O1
S/G/Y/R/B/O NT_033943AL512427708735083AQ805359-1chr6NT_033946AC026139728595231AQ785306-1CTD-3214E3
S/G/Y/R/B/O NT_033943AL512427708921833AQ2405111chr6NT_033946AC026139728916961AQ2405101CTD-2387M8
S/G/Y/R/B/O NT_033943AL512427709190473AQ1785291chr6NT_033172AL591624719126602AQ170997-1CTD-2217G8
S/G/Y/R/B/O NT_033943AL512427709190613AQ8780251chr6NT_033172AL390237718967013AQ695871-1CTD-2160I20
S/G/Y/R/B/O NT_033943AL512427709190613AQ8780251chr6NT_033946AC026139728825101AQ6958711CTD-2160I20
S/G/Y/R/B/O NT_033943AL512427709191003AQ3579401chr6NT_033172AL591624719366442AQ358015-1CTD-2254D5
S/G/Y/R/B/O NT_033943AL512427709412163AQ781292-1chr6NT_033172AL021368716457193AQ7807701CTD-3104D7
S/G/Y/R/B/O NT_033943AL512427709637873B523151chr6NT_033172AL591624719396412B52316-1CTC-388D7
S/G/Y/R/B/O NT_033943AL512427709963523B31099-1chr6NT_033946AC026139728916821B310981CTC-328A3
S/G/Y/R/B/O NT_033943AL512427710055753AQ695871-1chr6NT_033946AC026139728137211AQ878025-1CTD-2160I20
S/G/Y/R/B/O NT_033943AL512427710159383AQ507987-1chr6NT_033172AL021368717613163AQ5079891RP11-278J20
S/G/Y/R/B/O NT_033943AL512427710159383AQ507987-1chr6NT_033946AC026139728595801AQ507989-1RP11-278J20
S/G/Y/R/B/O NT_033943AL512427710200373AQ0038771chr6NT_033172AL603755721414232AQ0021641CTD-2288M11
S/G/Y/R/B/O NT_033943AL512427710227433AQ170997-1chr6NT_033946AC026139728137221AQ178529-1CTD-2217G8
S/G/Y/R/B/O NT_033943AL512427710237983AQ192455-1chr6NT_033172AL390237717908673AQ1925191CTD-2251O24
S/G/Y/R/B/O NT_033943AL512427710237983AQ192455-1chr6NT_033946AC026139728300271AQ192519-1CTD-2251O24
S/G/Y/R/B/O NT_033943AL607036710386493         4 confirm
S/G/Y/R/B/O NT_033943AL607036710576223AQ0369491chr6NT_033172AL603755721218512AQ0369501CTD-2324H6
S/G/Y/R/B/O NT_033943AL607036710660993AQ280516-1chr6NT_033172AL390237718067343AQ2805181CTD-2516D18
S/G/Y/R/B/O NT_033943AL607036710660993AQ280516-1chr6NT_033946AC026139728164771AQ280518-1CTD-2516D18
S/G/Y/R/B/O NT_033943AL607036710739963AQ0604021chr6NT_033172AL603755721414232AQ0748231CTD-2351E18
S/G/Y/R/B/O NT_033943AL607036710757793AQ7286551chr6NT_033172AL445250720487963AQ5938411RP11-1055E17
S/G/Y/R/B/O NT_033943AL607036710829513AQ2010171chr6NT_033172AL445250720871863AQ2010161RP11-60G9
S/G/Y/R/B/O NT_033943AL356672710908523         9 confirm
S/G/Y/R/B/O NT_033943AL356672711638833AQ620012-1chr6NT_033946AC026139728830741AQ454253-1RP11-762C13
S/G/Y/R/B/O NT_033943AL356672711638833AQ620012-1chr6NT_033172AL390237718962043AQ4542531RP11-762C13
S/G/Y/R/B/O NT_033943AL356672712005463B947411chr6NT_033172AL603755721075782AQ125863-1CTD-2168N4
S/G/Y/R/B/O NT_033943AL356672712008593AQ5124141chr6NT_033948AC025144723027251AQ456354-1RP11-690K14
S/G/Y/R/B/O NT_033943AL035688712172503         12 confirm
S/G/Y/R/B/O NT_033943AL035688712232593AQ6284821chr6NT_033172AL445250720606263AQ6284811CTD-2647G1
S/G/Y/R/B/O NT_033943AL035688712541863AQ8051881chr6NT_033172AL445250720488163AQ7843911CTD-3141E8
S/G/Y/R/B/O NT_033943AL035688712542463AQ4556751chr6NT_033172AL390237718896593AQ4366991RP11-644H11
S/G/Y/R/B/O NT_033943AL035688712549833AQ4759831chr6NT_033948AC025144723746821AQ475986-1CTD-2590P10
S/G/Y/R/B/O NT_033943AL035688712550033AQ8890071chr6NT_033172AL445250720487763AQ8232011CTD-3186P11
S/G/Y/R/B/O NT_033943AL035688712607643AQ315151-1chr6NT_033172AL603755722049072AQ315148-1RP11-106G21
S/G/Y/R/B/O NT_033943AL035688712626913AQ784391-1chr6NT_033172AL445250720573733AQ805188-1CTD-3141E8
S/G/Y/R/B/O NT_033943AL035688712627363AQ823201-1chr6NT_033172AL445250720565633AQ889007-1CTD-3186P11
S/G/Y/R/B/O NT_033943AL035688712632693AQ3516611chr6NT_033948AC025144723170501AQ311315-1CTD-2529K24
S/G/Y/R/B/O NT_033943AL035688712632693AQ3516611chr6NT_033948AL590544724437482AQ311315-1CTD-2529K24
S/G/Y/R/B/O NT_033943AL035688712648423B51780-1chr6NT_033172AL445250720992873B51781-1CTC-384A7
S/G/Y/R/B/O NT_033943AL035688712757833B388281chr6NT_033948AC025144723534771B388291CTC-831M12
S/G/Y/R/B/O NT_033943AL035688712757833B388281chr6NT_033948AL590544724695612B38829-1CTC-831M12
S/G/Y/R/B/O NT_033943AL035688712934763B410021chr6NT_033948AC025144723284471B410031CTC-774F20
S/G/Y/R/B/O NT_033943AL035688712934763B410021chr6NT_033948AL590544724575932B41003-1CTC-774F20


  NT_033943 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_033943AL035688712951383AQ3188931chr6NT_033948AC025144723655971AQ318891-1RP11-105D12
S/G/Y/R/B/O NT_033943AL035688713028473AQ4874021chr6NT_033948AC025144723690831AQ487405-1RP11-245I7
S/G/Y/R/B/O NT_033943AL035688713028643B751731chr6NT_033948AC025144723786021B75174-1RP11-13N6
S/G/Y/R/B/O NT_033943AL035688713037903AQ0150861chr6NT_033948AC025144723191001AQ026601-1CTD-2314I3
S/G/Y/R/B/O NT_033943AL035688713037903AQ0150861chr6NT_033948AL590544724457982AQ026601-1CTD-2314I3
S/G/Y/R/B/O NT_033943AL035688713213953AQ2054941chr6NT_033948AL590544724417572AQ203416-1CTD-3245I9
S/G/Y/R/B/O NT_033943AL035688713298463AQ108099-1chr6NT_033172AL445250720993203AQ108097-1CTD-2380G17
S/G/Y/R/B/O NT_033943AL035688713571623B70576-1chr6NT_033172AL591624720216722AQ245134-1CTD-2059M17
S/G/Y/R/B/O NT_033943AL035688713578643B869581chr6NT_033948AC025144724193211AQ003452-1RP11-26M18
S/G/Y/R/B/O NT_033943AL356131713661203         5 confirm
S/G/Y/R/B/O NT_033943AL356131713699863AQ075959-1chr6NT_033172AL445250720519483AQ075957-1CTD-2368E9
S/G/Y/R/B/O NT_033943AL356131713740733AQ1369121chr6NT_033948AC025144724008181AQ152002-1CTD-2221A23
S/G/Y/R/B/O NT_033943AL356131713876913B579141chr6NT_033948AL590544724791672AQ223293-1CTD-2010P13
S/G/Y/R/B/O NT_033943AL356131714009433AQ311315-1chr6NT_033172AL445250720482723AQ351661-1CTD-2529K24
S/G/Y/R/B/O NT_033943AC069484714018251         5 confirm
S/G/Y/R/B/O NT_033943AC069484714067471B168041chr6NT_033948AL590544724847142B16803-1CTA-343I4
S/G/Y/R/B/O NT_033943AC069484714090671AQ0008181chr6NT_033948AL590544724792342AQ008546-1CTD-2281B23
S/G/Y/R/B/O NT_033943AC069484714090671AQ0008181chr6NT_033948AL590544724800902AQ008546-1CTD-2281B23
S/G/Y/R/B/O NT_033943AC069484714197641AQ084981-1chr6NT_033948AL590544724957242AQ069311-1CTD-2265N8
S/G/Y/R/B/O NT_033943AC069484714269261B388291chr6NT_033172AL591624720276492B38828-1CTC-831M12
S/G/Y/R/B/O NT_033943AC069484714281021AQ114139-1chr6NT_033948AL590544725078812AQ114159-1CTD-2382O3
S/G/Y/R/B/O NT_033943AC069484714327231AQ077671-1chr6NT_033948AL590544725002752AQ077674-1CTD-2367E6
S/G/Y/R/B/O NT_033943AC069484714452661AQ6261691chr6NT_033948AC025144723745091AQ626173-1CTD-2650D15
S/G/Y/R/B/O NT_033943AC069484714680241AQ2661881chr6NT_007540AL356135730964543AQ266189-1CTD-2502N4
S/G/Y/R/B/O NT_033943AC069484714692051AQ152002-1chr6NT_033948AC025144723070861AQ1369121CTD-2221A23
S/G/Y/R/B/O NT_033943AC069484714831891B478241chr6NT_007540AL356135730992613B47823-1RP11-2L6
S/G/Y/R/B/O NT_033943AC069484714868401AQ3143361chr6NT_007540AL356135730991033AQ314335-1RP11-94C4
S/G/Y/R/B/O NT_033943AC069484714965731AQ3450881chr6NT_007540AL356135730679753AQ345085-1RP11-126A5
S/G/Y/R/B/O NT_033943AC069484715034761AQ6261731chr6NT_033948AC025144723092031AQ6261691CTD-2650D15
S/G/Y/R/B/O NT_033943AC069484715046561B869581chr6NT_033948AC025144724193211AQ003452-1RP11-26M18
S/G/Y/R/B/O NT_033943AC069484715071001AQ5328861chr6NT_007540AL356135730962233AQ532888-1RP11-374O9
S/G/Y/R/B/O NT_033943AC069484715083131AQ003452-1chr6NT_033948AC025144722956101B86958-1RP11-26M18