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  Chromosome 11 - Genetic Maps - Single Contig
 

Chromosome 11 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_009237
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009237AC100773293297553        
S/G/Y/R/B/O NT_009237AC067990295293041        
S/G/Y/R/B/O NT_009237AC090833296504251AFM079ZD3  1135.211 AC090833
S/G/Y/R/B/O NT_009237AC090833296504251AFM079ZD31138.60  1 AC090833
S/G/Y/R/B/O NT_009237AC087655296037211        
S/G/Y/R/B/O NT_009237AC024728296090681        
S/G/Y/R/B/O NT_009237AC011669296688903        
S/G/Y/R/B/O NT_009237AC027465296845233        
S/G/Y/R/B/O NT_009237AC090791298605303        
S/G/Y/R/B/O NT_009237AC110056299871943        
S/G/Y/R/B/O NT_009237AL356497300311543        
S/G/Y/R/B/O NT_009237AL359735300774983        
S/G/Y/R/B/O NT_009237AL353897302574263AFM119XG31139.201135.761 AC044915
S/G/Y/R/B/O NT_009237AL138813302607993        
S/G/Y/R/B/O NT_009237AC106852303374372        
S/G/Y/R/B/O NT_009237AL359980303678753        
S/G/Y/R/B/O NT_009237AL135933304510933        
S/G/Y/R/B/O NT_009237AC107973305621282        
S/G/Y/R/B/O NT_009237AC021233306780553AFMB314WH11139.801135.761AC009543, AC009543, AC021233, AL137864
S/G/Y/R/B/O NT_009237AC009543307659671        
S/G/Y/R/B/O NT_009237AC012112308311261        
S/G/Y/R/B/O NT_009237AC068749308450571        
S/G/Y/R/B/O NT_009237AC069194308451621        
S/G/Y/R/B/O NT_009237AL391623308499143        
S/G/Y/R/B/O NT_009237AL358944308973773        
S/G/Y/R/B/O NT_009237AL356860310131423        
S/G/Y/R/B/O NT_009237AL356440310743033        
S/G/Y/R/B/O NT_009237AL353699311318633GATA129E06  1133.571AC069194, AC069107, AC069194, AC090723, AL353699
S/G/Y/R/B/O NT_009237AL356240312248953        
S/G/Y/R/B/O NT_009237AL136088314147153AFMB295YD11142.001137.621 AC016880
S/G/Y/R/B/O NT_009237AC026844314469743        
S/G/Y/R/B/O NT_009237AL122014314717543        
S/G/Y/R/B/O NT_009237AL133296315678203        
S/G/Y/R/B/O NT_009237AL135932315949173        
S/G/Y/R/B/O NT_009237AL133349317393843AFM045XF21142.001137.621 AC034127, AL133349
S/G/Y/R/B/O NT_009237AL137160318032043        
S/G/Y/R/B/O NT_009237AL133376318615883        
S/G/Y/R/B/O NT_009237AL162614319607163        
S/G/Y/R/B/O NT_009237AL137804321020933GATA29B11  1137.621 AL137804
S/G/Y/R/B/O NT_009237AL137804321024673AFM165YF101142.001137.621 AL137804
S/G/Y/R/B/O NT_009237AC108456321573152        
S/G/Y/R/B/O NT_009237AL133295321840053        
S/G/Y/R/B/O NT_009237AL390768322883383        
S/G/Y/R/B/O NT_009237Z86001323456873        
S/G/Y/R/B/O NT_009237AL390767323827233        
S/G/Y/R/B/O NT_009237AL049852323925803        
S/G/Y/R/B/O NT_009237Z83308323963633        
S/G/Y/R/B/O NT_009237Z83309324406363        
S/G/Y/R/B/O NT_009237Z83306324709953        
S/G/Y/R/B/O NT_009237Z83001325104133        


  NT_009237 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009237Z83307325425553        
S/G/Y/R/B/O NT_009237Z95332325647043        
S/G/Y/R/B/O NT_009237AL049635325854743        
S/G/Y/R/B/O NT_009237AL138970326837873        
S/G/Y/R/B/O NT_009237AL035078327047773        
S/G/Y/R/B/O NT_009237AL078612328350153        
S/G/Y/R/B/O NT_009237AL109624329294123        
S/G/Y/R/B/O NT_009237AL079340330085453        
S/G/Y/R/B/O NT_009237AL049692331224503        
S/G/Y/R/B/O NT_009237AC087653332499301        
S/G/Y/R/B/O NT_009237AC023857332752721        
S/G/Y/R/B/O NT_009237AL078477333170983        
S/G/Y/R/B/O NT_009237AL096793334247503        
S/G/Y/R/B/O NT_009237AL049714334978483        
S/G/Y/R/B/O NT_009237AL035400335530643        
S/G/Y/R/B/O NT_009237AL049713336647323        
S/G/Y/R/B/O NT_009237AC107939337629923        
S/G/Y/R/B/O NT_009237AL121926338191883        
S/G/Y/R/B/O NT_009237AC087824338661262        
S/G/Y/R/B/O NT_009237AL136126339575173        
S/G/Y/R/B/O NT_009237AL122015341024193AFMA218XF51144.201140.121 AC022677, AL122015
S/G/Y/R/B/O NT_009237AL137161341479543        
S/G/Y/R/B/O NT_009237AL133399342800703AFMA041ZE51144.201140.121 AL133399
S/G/Y/R/B/O NT_009237AL049575342822173        
S/G/Y/R/B/O NT_009237AL049629343769523        
S/G/Y/R/B/O NT_009237AC069193345641401AFM198YF81144.201140.121AC113192, AC113192
S/G/Y/R/B/O NT_009237AC113192355509502UT1916  1140.901 AC113192
S/G/Y/R/B/O NT_009237AC087783345793421        
S/G/Y/R/B/O NT_009237AC011006345811111        
S/G/Y/R/B/O NT_009237AC087661345836231        
S/G/Y/R/B/O NT_009237AC107928347302872AFMA081TG51146.901142.551AC011006, AC011006, AC036227, AC107928
S/G/Y/R/B/O NT_009237AL359999347605433        
S/G/Y/R/B/O NT_009237AL157952349152283AFM109YA11146.901142.551AC019083, AC087783, AC019083, AC087783
S/G/Y/R/B/O NT_009237AL157952349426253GATA6B09  1143.161AC019083, AC087783, AC019083, AC087783
S/G/Y/R/B/O NT_009237AC019083349754111        
S/G/Y/R/B/O NT_009237AL137224350008723        
S/G/Y/R/B/O NT_009237AL035079350859103        
S/G/Y/R/B/O NT_009237AL139174352220943        
S/G/Y/R/B/O NT_009237AL133294352263053        
S/G/Y/R/B/O NT_009237AL049652353324702        
S/G/Y/R/B/O NT_009237AC090469354719821        
S/G/Y/R/B/O NT_009237AC037464355090241        
S/G/Y/R/B/O NT_009237AL135799356159932GATA62H06  1139.181 AL135799
S/G/Y/R/B/O NT_009237AC090156357333871GATA183C05  1140.951AC068306, AC068306, AC090156
S/G/Y/R/B/O NT_009237AC068306356605241GATA50B07  1140.951 AC068306
S/G/Y/R/B/O NT_009237 - GATA82A06  1137.620  
S/G/Y/R/B/O NT_009237 - UT832  1142.550