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  Chromosome 11 - Genetic Maps - Single Contig
 

Chromosome 11 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_033899
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033899AC0168491185005001        
S/G/Y/R/B/O NT_033899AC0678231185377821        
S/G/Y/R/B/O NT_033899AC0189971185481391        
S/G/Y/R/B/O NT_033899AP0019941185562633        
S/G/Y/R/B/O NT_033899AP0013601188128593AFMB004ZF911121.3011116.071AC018997, AC018997, AP000748
S/G/Y/R/B/O NT_033899AP0006791188999363        
S/G/Y/R/B/O NT_033899AP0011501189802193        
S/G/Y/R/B/O NT_033899AP0006591191228033        
S/G/Y/R/B/O NT_033899AP0007581191815853        
S/G/Y/R/B/O NT_033899AP0023481192956183        
S/G/Y/R/B/O NT_033899AP0007961194502773        
S/G/Y/R/B/O NT_033899AP0041471195550593AFM262ZF111123.4011118.471 AP004147, AP004246
S/G/Y/R/B/O NT_033899AP0019291196926503AFM220YB611123.5011118.471 AP000667, AP001929
S/G/Y/R/B/O NT_033899AP0006461198540633AFMA162WF511123.6011119.071 AP000646, AP001806
S/G/Y/R/B/O NT_033899AP0008261199134463AFMA225ZF911123.6011119.071 AP000826, AP000881
S/G/Y/R/B/O NT_033899AP0011241199619463        
S/G/Y/R/B/O NT_033899AP0029591200494443        
S/G/Y/R/B/O NT_033899AP0023651201733003        
S/G/Y/R/B/O NT_033899AP0009771201844473        
S/G/Y/R/B/O NT_033899AP0006641203687263        
S/G/Y/R/B/O NT_033899AP0019771204556443        
S/G/Y/R/B/O NT_033899AP0019821205909833        
S/G/Y/R/B/O NT_033899AP0019241207210763        
S/G/Y/R/B/O NT_033899AP0013591208931573UT546  11118.471 AC009544, AP000674, AP001163, AP001359, AP001384
S/G/Y/R/B/O NT_033899AP0007551210162943AFMB334ZD511124.6011120.871 AC009544, AP000755
S/G/Y/R/B/O NT_033899AP0018351211023803AFMB318ZF911125.9011120.871AP001936, AP000891, AP001835, AP001936
S/G/Y/R/B/O NT_033899AP0018351211637583AFM302XB911126.0011120.872AP001936, AC018619, AC019303, AP001835, AP001936
S/G/Y/R/B/O NT_033899AP0030421211980313        
S/G/Y/R/B/O NT_033899AP0024691213176783MFD316  11120.871AC067823, AC067823, AP002469
S/G/Y/R/B/O NT_033899AP0027621215049853AFM286XF511125.8011120.871 AC069316, AP002762
S/G/Y/R/B/O NT_033899AP0043181215747623        
S/G/Y/R/B/O NT_033899AP0030401217013163        
S/G/Y/R/B/O NT_033899AP0008251217617671        
S/G/Y/R/B/O NT_033899AC0217041217669851        
S/G/Y/R/B/O NT_033899AP0009261217802803        
S/G/Y/R/B/O NT_033899AP0019701219945563UT548  11105.741 AC007219
S/G/Y/R/B/O NT_033899AP0017821221777113AFMA189YB111129.5011123.001AP000783, AP000783, AP001782
S/G/Y/R/B/O NT_033899AP0007831221813203AFM256ZA511128.4011120.871 AC080039
S/G/Y/R/B/O NT_033899AP0007831221918043AFM331YC511127.8011122.471 AP000783
S/G/Y/R/B/O NT_033899AP0008411223187033AFMB066ZG911128.4011123.001AP002765, AC063921, AC080039, AP000841, AP002765, U73644
S/G/Y/R/B/O NT_033899AP0027651223595083AFM214XG711128.4011123.001 AC021981, AC063921, AP002749
S/G/Y/R/B/O NT_033899AP0008681225138543GATA64D03  11123.001AP000825, AP000825, AP000868
S/G/Y/R/B/O NT_033899AP0008681225515733MFD108A  11123.001AP000825, AP000825, AP000868
S/G/Y/R/B/O NT_033899AP0024071227533753GATA140F03  11123.001 AC019108, AP002407
S/G/Y/R/B/O NT_033899AP0018841228169493        
S/G/Y/R/B/O NT_033899AP0008181229151633AFM265WA911128.4011123.001 AP000818
S/G/Y/R/B/O NT_033899AP0029651229756573        
S/G/Y/R/B/O NT_033899AC0025561231760153AFM200WD411128.4011123.001AP000916, AC002556, AC083958, AP000916, AP001804
S/G/Y/R/B/O NT_033899AP0009161231905313        
S/G/Y/R/B/O NT_033899AP0015241233648333        


  NT_033899 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033899AP0008901234332403        
S/G/Y/R/B/O NT_033899AP0008661235594473AFM240YE111129.5011124.071AP000680, AP000680, AP000866
S/G/Y/R/B/O NT_033899AP0035011236267083        
S/G/Y/R/B/O NT_033899AP0031721238116573AFMB320YE111131.7011126.211 AP003172
S/G/Y/R/B/O NT_033899AP0010071238428073        
S/G/Y/R/B/O NT_033899AP0030611240436463        
S/G/Y/R/B/O NT_033899AP0030691241437963        
S/G/Y/R/B/O NT_033899AP0007081242394393        
S/G/Y/R/B/O NT_033899AP0014941243028973        
S/G/Y/R/B/O NT_033899AP0011321243669213        
S/G/Y/R/B/O NT_033899AP0030871245342973        
S/G/Y/R/B/O NT_033899AP0008421247152803MFD251  11126.211 AC091496, AP000835
S/G/Y/R/B/O NT_033899AP0008421247528833MFD290  11126.211AP001143, AP000842, AP001143
S/G/Y/R/B/O NT_033899AP0008211248401433AFM333XF911131.7011126.211AP001893, AP000821, AP001893, AP002359
S/G/Y/R/B/O NT_033899AP0018931249671913AFM248WF511131.7011126.211AC026265, AC011728, AC026265, AP000717
S/G/Y/R/B/O NT_033899AC0918521249791552        
S/G/Y/R/B/O NT_033899AC0840781249949421        
S/G/Y/R/B/O NT_033899AC0212221250242051        
S/G/Y/R/B/O NT_033899AP0030411250263701        
S/G/Y/R/B/O NT_033899AP0008531250791691        
S/G/Y/R/B/O NT_033899AC0791231250913071        
S/G/Y/R/B/O NT_033899AC0251201251029081        
S/G/Y/R/B/O NT_033899AP0034831251092041        
S/G/Y/R/B/O NT_033899AP0033261251269753        
S/G/Y/R/B/O NT_033899AP0033271251810813        
S/G/Y/R/B/O NT_033899AC0105831252553283        
S/G/Y/R/B/O NT_033899AP0035001254390323        
S/G/Y/R/B/O NT_033899AP0037821256001103        
S/G/Y/R/B/O NT_033899AP0037751256396553        
S/G/Y/R/B/O NT_033899AP0028861258057403        
S/G/Y/R/B/O NT_033899AC0155921259046863        
S/G/Y/R/B/O NT_033899AP0007511259983413        
S/G/Y/R/B/O NT_033899AP0009201262284053AFMB286XF911138.5011132.951 AP000920
S/G/Y/R/B/O NT_033899AP0011221263298803AFMA311ZG511136.9011131.261 AP001122, AP001535, Y17293
S/G/Y/R/B/O NT_033899AP0011221263657233AFM157XH611136.9011131.261 AP000712, AP001122
S/G/Y/R/B/O NT_033899AP0019951264684943        
S/G/Y/R/B/O NT_033899AP0033971265436333        
S/G/Y/R/B/O NT_033899AP0018291267229183AFMA163TB511136.9011131.261 AP002828
S/G/Y/R/B/O NT_033899AP0009041268475663AFM324ZH911136.9011131.261 AC069267, AP000904, AP002811, AP002828
S/G/Y/R/B/O NT_033899AP0010001269853013        
S/G/Y/R/B/O NT_033899AP0030981271403603        
S/G/Y/R/B/O NT_033899AP0035321273242131        
S/G/Y/R/B/O NT_033899AP0013181273628401        
S/G/Y/R/B/O NT_033899AC0262651274021201        
S/G/Y/R/B/O NT_033899AP0008061275280983AFMB290YH111132.9011127.331 AP000806
S/G/Y/R/B/O NT_033899AP0007411276108383        
S/G/Y/R/B/O NT_033899AP0017831277639733        
S/G/Y/R/B/O NT_033899AP0028321278452213        
S/G/Y/R/B/O NT_033899AP0028331279601183        
S/G/Y/R/B/O NT_033899AP0019731281326793        


  NT_033899 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033899AP0019931282077883AFM031XG311134.7011129.021 AP000709, AP001993
S/G/Y/R/B/O NT_033899AP0031211282989163        
S/G/Y/R/B/O NT_033899AP0034811283479183        
S/G/Y/R/B/O NT_033899AP0034621284600693        
S/G/Y/R/B/O NT_033899AP0035031286121693        
S/G/Y/R/B/O NT_033899AC0223331287571833        
S/G/Y/R/B/O NT_033899AC0216721288352141        
S/G/Y/R/B/O NT_033899AC0789711288805291        
S/G/Y/R/B/O NT_033899AC0096441289105971        
S/G/Y/R/B/O NT_033899AP0006801289257191        
S/G/Y/R/B/O NT_033899AC0800531289317731        
S/G/Y/R/B/O NT_033899AP0011431289378241        
S/G/Y/R/B/O NT_033899AP0019361289433001        
S/G/Y/R/B/O NT_033899AP0011831289566723        
S/G/Y/R/B/O NT_033899AC0192271291311983        
S/G/Y/R/B/O NT_033899AP0029861292105333        
S/G/Y/R/B/O NT_033899AP0034591293302853        
S/G/Y/R/B/O NT_033899AP0043711293550373        
S/G/Y/R/B/O NT_033899AP0034861295339473        
S/G/Y/R/B/O NT_033899AP0008241295851613        
S/G/Y/R/B/O NT_033899AP0010931297720813        
S/G/Y/R/B/O NT_033899AP0028061298601533        
S/G/Y/R/B/O NT_033899AP0028561300190233        
S/G/Y/R/B/O NT_033899AP0031661302069413        
S/G/Y/R/B/O NT_033899AP0030251302406183        
S/G/Y/R/B/O NT_033899AP0030391305256573GATA72A01  11138.561AC073904, AC027594, AC073904, AF240624, AP003039
S/G/Y/R/B/O NT_033899AP0030391305593313AFMB002VD111143.8011138.561AC073904, AP004372, AC073904, AP004372
S/G/Y/R/B/O NT_033899AP0043721305953773AFMA343YH511143.8011138.561AC073904, AC027594, AC073904, AP004372
S/G/Y/R/B/O NT_033899AP0043721307110043AFM154YH211145.6011140.181 AP002341
S/G/Y/R/B/O NT_033899AP0008441309121673AFM234YF1011147.2011141.911AP002355, AP002355
S/G/Y/R/B/O NT_033899AP0023551309131873        
S/G/Y/R/B/O NT_033899AP0047221309721503AFMA062TF511146.4011141.051 AP004722
S/G/Y/R/B/O NT_033899AP0028311309816231        
S/G/Y/R/B/O NT_033899AC0739041309858901        
S/G/Y/R/B/O NT_033899 - UT1607  11126.211AC022651, AC024255, AC022651, AC024255
S/G/Y/R/B/O NT_033899 - ETS1  11131.260