Home    Genome Browser    BLAT Search    Help
  Chromosome 20 - Genetic Maps - Single Contig
 

Chromosome 20 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011387 NT_025215 NT_028392 NT_011362 NT_030871 NT_011333


  NT_028392
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028392AL121723295919663        
S/G/Y/R/B/O NT_028392AL031650296624183        
S/G/Y/R/B/O NT_028392AL121751298559843GATA65E02  2049.711 AL121751
S/G/Y/R/B/O NT_028392AL110115299023633        
S/G/Y/R/B/O NT_028392AL117381299816823        
S/G/Y/R/B/O NT_028392AL160175300811753        
S/G/Y/R/B/O NT_028392AL359765302499353        
S/G/Y/R/B/O NT_028392AL031658302646883AFM190XG12049.202049.711 AL031658
S/G/Y/R/B/O NT_028392AL031658303658633AFMA339XF52050.702049.711 AL031658
S/G/Y/R/B/O NT_028392AL031658303687603AFMB054ZH92050.702049.711 AL031658
S/G/Y/R/B/O NT_028392AL353092304264913        
S/G/Y/R/B/O NT_028392AL049539305017713AFMB059WB12050.702050.811 AL049539
S/G/Y/R/B/O NT_028392AL121897305629953        
S/G/Y/R/B/O NT_028392AL354800307082013        
S/G/Y/R/B/O NT_028392AL121583307539343AFMA141XD92049.702050.261 AL121583
S/G/Y/R/B/O NT_028392AL034550308519013AFM288YB12049.702050.261 AC017072, AL034550
S/G/Y/R/B/O NT_028392AL034550308539613AFM262XF92050.202050.811 AC017072, AL034550
S/G/Y/R/B/O NT_028392AL133343309672613AFMA176XC92049.702050.261 AC017072, AL133343
S/G/Y/R/B/O NT_028392AL132653310517773AFMA136ZG52050.702050.811 AL132653
S/G/Y/R/B/O NT_028392AL035071310867343        
S/G/Y/R/B/O NT_028392AL390298312055333        
S/G/Y/R/B/O NT_028392AL139826312546413        
S/G/Y/R/B/O NT_028392AL121756313349603        
S/G/Y/R/B/O NT_028392AL137225314643623        
S/G/Y/R/B/O NT_028392AL121901315843973AFM321XC12050.202050.811 AF228348, AL121901
S/G/Y/R/B/O NT_028392AL355392316407573        
S/G/Y/R/B/O NT_028392AL162505318000973        
S/G/Y/R/B/O NT_028392AL034421318941303AFMB318XE12050.202050.811 AL034421
S/G/Y/R/B/O NT_028392AL121906319702033        
S/G/Y/R/B/O NT_028392AL050349320520173        
S/G/Y/R/B/O NT_028392AL034549322248123AFMB280XH52050.202050.811 AL034549
S/G/Y/R/B/O NT_028392AL031668323628543        
S/G/Y/R/B/O NT_028392AL035458325021323        
S/G/Y/R/B/O NT_028392AL356299326172633        
S/G/Y/R/B/O NT_028392AL109923327694973        
S/G/Y/R/B/O NT_028392AL136173328672293        
S/G/Y/R/B/O NT_028392AL118520328905713        
S/G/Y/R/B/O NT_028392AL109824330484383        
S/G/Y/R/B/O NT_028392AL049709332660053AFM123YF82050.202050.811 AL049709
S/G/Y/R/B/O NT_028392AL133324332671893        
S/G/Y/R/B/O NT_028392AL132825333261913        
S/G/Y/R/B/O NT_028392AL135844334498733        
S/G/Y/R/B/O NT_028392AL356652334868003        
S/G/Y/R/B/O NT_028392AL121753335369173        
S/G/Y/R/B/O NT_028392AL121752336872983        
S/G/Y/R/B/O NT_028392AL389874337558903        
S/G/Y/R/B/O NT_028392AL121586337676953        
S/G/Y/R/B/O NT_028392AL389875339195983        
S/G/Y/R/B/O NT_028392AL109827339409583        
S/G/Y/R/B/O NT_028392AL357374340394573        


  NT_028392 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028392AL356422341199223        
S/G/Y/R/B/O NT_028392AL078461342107283AFMA045ZE52050.702050.811 AL078461
S/G/Y/R/B/O NT_028392AL109965342363793        
S/G/Y/R/B/O NT_028392AL359828343415093        
S/G/Y/R/B/O NT_028392AL035420344126993AFMA072ZF9  2050.811 AC016510
S/G/Y/R/B/O NT_028392AL035420344126993AFMA072ZF92048.10  1 AC016510
S/G/Y/R/B/O NT_028392AL035420344569273AFM275VC92050.202050.811 AC016510
S/G/Y/R/B/O NT_028392AL035420344595823AFMB030XE92050.702050.811 AL035420
S/G/Y/R/B/O NT_028392AL121895344893873AFMA357ZB92050.202050.811 AC016510, AL121895
S/G/Y/R/B/O NT_028392AL121895346119133AFMA197YD52050.202050.811 AL121895
S/G/Y/R/B/O NT_028392AL512784346417473        
S/G/Y/R/B/O NT_028392 - GATA65E01  2050.810