Chromosome 22 - RH Maps - Single Contig

Chromosome 22 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_011516	NT_028395	NT_011519	NT_011520	NT_011521	NT_011522	NT_011523	NT_030872
NT_011525	NT_019197	NT_011526

NT_011522

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011522	Z85994	41376044	3
S/G/Y/R/B/O	NT_011522	Z81308	41469356	3
S/G/Y/R/B/O	NT_011522	AL023973	41520619	3	RH66288	22	152.14					1		AL023973
S/G/Y/R/B/O	NT_011522	AL023973	41523808	3	RH26199	22	144.47					1		AL023973
S/G/Y/R/B/O	NT_011522	AL023973	41523817	3	WI-14034					22	171.10	1		AL023973
S/G/Y/R/B/O	NT_011522	AL023973	41523817	3	RH57663	22	143.55					1		AL023973
S/G/Y/R/B/O	NT_011522	AL023973	41524043	3	RH45500	22	153.37					1		AL023973
S/G/Y/R/B/O	NT_011522	Z75407	41524983	3
S/G/Y/R/B/O	NT_011522	AL022317	41566459	3
S/G/Y/R/B/O	NT_011522	AL022333	41581985	3
S/G/Y/R/B/O	NT_011522	Z98743	41662228	3
S/G/Y/R/B/O	NT_011522	Z93244	41768478	3	RH57746	22	141.97			22	167.40	1		Z93244
S/G/Y/R/B/O	NT_011522	Z83838	41904439	3	RH15132	22	148.15	22	1576.00			1		Z83838
S/G/Y/R/B/O	NT_011522	AL079301	42036854	3	RH104094	22	149.86					1		AL079301
S/G/Y/R/B/O	NT_011522	AL049760	42038611	3
S/G/Y/R/B/O	NT_011522	Z82243	42157629	3
S/G/Y/R/B/O	NT_011522	AL008718	42223470	3	RH36766	22	151.20					1		AC062010, AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42223632	3	RH78480	22	151.43					1		AC062010, AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42227045	3	RH25862	22	151.01					2	AC090439,	AC062010, AC090439, AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42227075	3	RH14279			22	1620.00			2	AC090439,	AC062010, AC090439, AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42354149	3	RH57874	22	151.43	22	1566.00	22	173.90	1		AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42354466	3	RH98789	22	152.35					1		AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42371031	3	RH71148	22	151.01					1		AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42372837	3	WI-20637					22	173.80	1		AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42372837	3	RH57720	22	154.53					1		AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42372838	3	RH103408	22	151.82					1		AL008718
S/G/Y/R/B/O	NT_011522	AL008718	42372891	3	RH38865	22	151.43					1		AL008718
S/G/Y/R/B/O	NT_011522	AL021391	42456748	3	RH65547	22	151.01					1		AL021391
S/G/Y/R/B/O	NT_011522	AL021391	42469687	3	RH36079	19	218.16					2	AC012309,	AC012309, AC068942, AL021391
S/G/Y/R/B/O	NT_011522	Z98047	42536410	3
S/G/Y/R/B/O	NT_011522	Z95331	42596196	3	RH1866			22	1542.00			1		Z95331
S/G/Y/R/B/O	NT_011522	Z95331	42596720	3	CHLC.GGAT3A11.1223					22	174.10	1		Z95331
S/G/Y/R/B/O	NT_011522	Z95331	42631650	3	RH8619			22	1545.00			1		Z95331
S/G/Y/R/B/O	NT_011522	Z95331	42631946	3	RH29241			22	1548.00			1		Z95331
S/G/Y/R/B/O	NT_011522	Z95331	42632106	3	WI-6485					22	176.30	1		Z95331
S/G/Y/R/B/O	NT_011522	Z95331	42632106	3	RH57651	22	154.59					1		Z95331
S/G/Y/R/B/O	NT_011522	Z95331	42708481	3	RH67132	22	153.52					1		Z95331
S/G/Y/R/B/O	NT_011522	Z93784	42728105	3	RH57699	22	154.53			22	178.30	1		Z93784
S/G/Y/R/B/O	NT_011522	Z93784	42788649	3	RH101952	22	154.53					1		Z93784
S/G/Y/R/B/O	NT_011522	Z84478	42850711	3	RH45963	22	153.15					1		Z84478
S/G/Y/R/B/O	NT_011522	Z84478	42875069	3	RH66155	22	153.15					1		Z84478
S/G/Y/R/B/O	NT_011522	Z84478	42875077	3	RH80881	22	153.58					1		Z84478
S/G/Y/R/B/O	NT_011522	Z84478	42875746	3	RH10173	22	153.52					1		Z84478
S/G/Y/R/B/O	NT_011522	Z84478	42875860	3	RH57737	22	153.58			22	179.40	1		Z84478
S/G/Y/R/B/O	NT_011522	Z84478	42876276	3	RH66330	22	153.52					1		Z84478
S/G/Y/R/B/O	NT_011522	AL049811	42903031	3	RH38818	22	153.15					1		AL049811
S/G/Y/R/B/O	NT_011522		-		RH102963	22	153.15					0	AL031588,	AF448221, AL022325, AL031588
S/G/Y/R/B/O	NT_011522		-		RH14984			22	1529.00			1	AL078611,	AL078611, AL121672, Z79997
S/G/Y/R/B/O	NT_011522		-		SGC35561					22	171.20	1	AL022237,	AC000406, AL022237
S/G/Y/R/B/O	NT_011522		-		RH41776	22	153.15					0		AL121672

NT_011522 (cont)

Links	Contig	Chr Start	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011522	-	RH31509			22	1555.00			0
S/G/Y/R/B/O	NT_011522	-	RH33016			22	1516.00			1	AL031588,	AL031588
S/G/Y/R/B/O	NT_011522	-	RH8457			22	1543.00			1	U62317,	L49235, U62317
S/G/Y/R/B/O	NT_011522	-	RH57735	22	153.15			22	174.20	0		AL121672
S/G/Y/R/B/O	NT_011522	-	RH92666	22	153.15					0