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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009711
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009711AC079850631163381          
S/G/Y/R/B/O NT_009711AC020647631888473WI-3818    12368.801AC079850, AC020647, AC079850
S/G/Y/R/B/O NT_009711AC090439632721451RH1709222143.97    3AL049758, AC090439, AC090439, AL049758, Z82199
S/G/Y/R/B/O NT_009711AC090439632751901RH4024710448.63    2AL138759, AC090439, AL138759
S/G/Y/R/B/O NT_009711AC090439632752611RH9366710445.19    2AL138759, AC090439, AL138759
S/G/Y/R/B/O NT_009711AC090439632756381RH35758X283.41    3AL359079, AC090439, AC090439, AL359079
S/G/Y/R/B/O NT_009711AC090439632770081RH12026346.81    2AC022382, AC008034, AC011610, AC022382, AC066599, AC068315, AC090439, AF176915
S/G/Y/R/B/O NT_009711AC090439632804891RH502201111.1511958.001126.502AC114484, AL360074, AC090439, AC114484, AL360074
S/G/Y/R/B/O NT_009711AC090439632853361RH105232182.04    1AC005369, AC116353, AC005369, AC010687, AC011398, AC090439, AC116353
S/G/Y/R/B/O NT_009711AC090439632857521RH35758X283.41    3AL359079, AC090439, AC090439, AL359079
S/G/Y/R/B/O NT_009711AC090439632872111RH7021517435.20    2AC005799, AC079210, AC005799, AC079210, AC090439
S/G/Y/R/B/O NT_009711AC090439632872801RH3929817435.20    2AC005799, AC079210, AC005799, AC079210, AC090439
S/G/Y/R/B/O NT_009711AC090439632875541RH3640617435.20    2AC005799, AC079210, AC005799, AC079210, AC090439
S/G/Y/R/B/O NT_009711AC090439632883031RH1033463446.93    2AC016959, AC110873, AF238377, AC016959, AC090439, AC110873, AF238377
S/G/Y/R/B/O NT_009711AC090439632886621RH942773446.51    2AC016959, AC110873, AF238377, AC016959, AC090439, AC110873, AF238377
S/G/Y/R/B/O NT_009711AC090439632899591RH3909219216.04    2AD000684, AC090439, AD000684, Y07661
S/G/Y/R/B/O NT_009711AC090439632900841RH7626419236.90    2  
S/G/Y/R/B/O NT_009711AC090439632900851RH7600519216.04    2  
S/G/Y/R/B/O NT_009711AC090439632919021RH2586222151.01    2AL008718, AC062010, AC090439, AL008718
S/G/Y/R/B/O NT_009711AC090439632919321RH14279  221620.00  2AL008718, AC062010, AC090439, AL008718
S/G/Y/R/B/O NT_009711AC090439632942861RH42914  52524.00  4AC004999, AC010217, AC016554, AC004999, AC010217, AC012369, AC016554, AC090439, AC090439, AC109487
S/G/Y/R/B/O NT_009711AC090439632956921RH161256569.96    2AL033522, AC090439, AL033522, AL355489
S/G/Y/R/B/O NT_009711AC090439632963081RH255636570.25    2AL033522, AC090439, AL033522, AL355489
S/G/Y/R/B/O NT_009711AC090439632963301RH161186570.25    2AL033522, AC090439, AL033522, AL355489
S/G/Y/R/B/O NT_009711AC090439632967111RH11907185.42    2AL020996, AC010855, AC090439, AL020996
S/G/Y/R/B/O NT_009711AC090439632987461RH200192067.70    2AL590609, AC090439, AL590609, AY048592
S/G/Y/R/B/O NT_009711AC090439632988541RH1351  11372.00  2AL590609, AC090439, AL590609, AY048592
S/G/Y/R/B/O NT_009711AC090439632989091RH26834183.60    3AL031679, AL590609, AC090439, AL031679, AL590609, AY048592
S/G/Y/R/B/O NT_009711AC090439633005671RH177951674.01    2AC048369, AL606489, AC048369, AC090439, AL606489
S/G/Y/R/B/O NT_009711AC090439633016351RH42914  52524.00  4AC004999, AC010217, AC016554, AC004999, AC010217, AC012369, AC016554, AC090439, AC090439, AC109487
S/G/Y/R/B/O NT_009711AC090439633053441RH3903320200.16    2AL135844, AC090439, AL135844
S/G/Y/R/B/O NT_009711AC090439633068061RH1218120106.71    2AL161658, AC090439, AL161658
S/G/Y/R/B/O NT_009711AC090439633075411RH1214720105.79    2AL161658, AC090439, AL161658
S/G/Y/R/B/O NT_009711AC090439633177671RH4567615146.69    2AC012652, AC092473, AC093029, AC104801, AC012652, AC023925, AC026156, AC090439, AC092473, AC093029, AC104801
S/G/Y/R/B/O NT_009711AC090439633185671RH1709222143.97    3AL049758, AC090439, AC090439, AL049758, Z82199
S/G/Y/R/B/O NT_009711AC090439633209151RH7849112430.71    1 AC090439
S/G/Y/R/B/O NT_009711AC013638633236761          
S/G/Y/R/B/O NT_009711AC078872633904383WI-5903    12373.001AC013638, AC090439, AC013638, AC016169, AC078872, AC090439
S/G/Y/R/B/O NT_009711AC078789634923993          
S/G/Y/R/B/O NT_009711AC025077636158911RH7545012275.24    1 AC025077
S/G/Y/R/B/O NT_009711AC048342636284811          
S/G/Y/R/B/O NT_009711AC025838636311291          
S/G/Y/R/B/O NT_009711AC018658636562441RH4496512289.64    1AC025077, AC048342, AC018658, AC025077, AC048342
S/G/Y/R/B/O NT_009711AC079035636833233RH7788512290.13    1AC018658, AC025077, AC048342, AC018658, AC025077, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC079035636942383RH14244  122528.00  1AC018658, AC048342, AC018658, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC079035637079553RH3973012272.11    1AC018658, AC025077, AC048342, AC018658, AC025077, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC079035637080523RH6759312271.81    1AC018658, AC025077, AC048342, AC018658, AC025077, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC079035637254043RH4464412289.64    1AC018658, AC025077, AC025838, AC048342, AC018658, AC025077, AC025838, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC079035637254083RH3983812271.50    1AC018658, AC025077, AC025838, AC048342, AC018658, AC025077, AC025838, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC079035637373563RH3970612271.90    1AC018658, AC025838, AC018658, AC025838, AC079035


  NT_009711 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009711AC079035638089203CHLC.GATA71A08    12371.001AC018658, AC025838, AC048342, AC018658, AC025838, AC048342, AC079035
S/G/Y/R/B/O NT_009711AC026115638890643RH7962512275.02    1 AC026115
S/G/Y/R/B/O NT_009711AC048341639834943RH4620012277.35    1 AC025658, AC048341
S/G/Y/R/B/O NT_009711AC048341639961353RH4485712290.13    1  
S/G/Y/R/B/O NT_009711AC048341640234663RH2595412272.63    1 AC025658, AC026677, AC048341, AC079158
S/G/Y/R/B/O NT_009711AC048341640236023RH7810512278.42    1 AC025658, AC026677, AC048341, AC079158
S/G/Y/R/B/O NT_009711AC048341640329783WI-563    12367.001 AC025658, AC026677, AC048341, AC079158
S/G/Y/R/B/O NT_009711AC025264640638803RH7654912275.74    1 AC025264, AC025658, AC026677, AC079158
S/G/Y/R/B/O NT_009711AC025264641276613D12S329    12371.301 AC036197
S/G/Y/R/B/O NT_009711AC025264641276613RH4237112279.71    1 AC036197
S/G/Y/R/B/O NT_009711AC025264641276613RH31557  122552.00  1 AC036197
S/G/Y/R/B/O NT_009711AC025264641367223WI-7444    12371.001 AC026677
S/G/Y/R/B/O NT_009711AC025264641494653RH14248  122548.00  1 AC025264, AC026677, AC036197, AC079158
S/G/Y/R/B/O NT_009711AC023359642384593          
S/G/Y/R/B/O NT_009711AC078814643448763RH7827012292.47    2AC017029, AC026104, AC017029, AC026104, AC078814
S/G/Y/R/B/O NT_009711AC078814643842563RH9226712277.51    1AC017029, AC026104, AC017029, AC026104, AC078814
S/G/Y/R/B/O NT_009711AC025525655130301RH3976012275.85    1 AC025525, U19906
S/G/Y/R/B/O NT_009711AC025525655132801RH2040  122565.00  1 AC025525, U19906
S/G/Y/R/B/O NT_009711AC053489644753071          
S/G/Y/R/B/O NT_009711AC084357646045973RH9869512288.50    1 AC084357, AL451067
S/G/Y/R/B/O NT_009711AC084357646170033RH7794712277.13    1 AC084357, AL451067
S/G/Y/R/B/O NT_009711AC084357646343673RH8037512292.04    1 AC084357, AL451067
S/G/Y/R/B/O NT_009711AC079866646814891          
S/G/Y/R/B/O NT_009711AC020611648829073RH6856312276.92    1 AC020611, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC020611648844733RH1688712277.51    1AC025576, AC020611, AC025576, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC025576648906883RH120663437.31    1 AC025576, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC025576649450783RH4447312277.77    1 AC025576, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC025576649480233RH4452412288.19    1 AC025576, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC025576649480233RH8030212278.26    1 AC025576, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158649916273WI-16039    12375.301 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158649916273RH5310212288.40    1 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158649940703RH14865  122610.0012373.401 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158649940703RH5247212292.25    1 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158649949053RH10361512279.29    1 AC012158, AC026114
S/G/Y/R/B/O NT_009711AC012158649953633RH2709812287.77    1 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158650076723WI-18097    12378.401 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC012158650076723RH5247512282.41    1 AC012158, AC026114, AC055724
S/G/Y/R/B/O NT_009711AC079263651288353          
S/G/Y/R/B/O NT_009711AC026116653005683RH9234012281.25    1AC020609, AC020609, AC026116, AC068778, AC078827
S/G/Y/R/B/O NT_009711AC017029654699031          
S/G/Y/R/B/O NT_009711AC026104654790311          
S/G/Y/R/B/O NT_009711AC020609655736381          
S/G/Y/R/B/O NT_009711 - RH2560512274.81    1AC011612, AC025569, AC011053, AC011612, AC025569
S/G/Y/R/B/O NT_009711 - RH37847  122610.00  0AC006285, AC007666, AC005745, AC006285, AC007666
S/G/Y/R/B/O NT_009711 - RH6835412275.95    1AC011612, AC073099, AC011612, AC073099, AC092881
S/G/Y/R/B/O NT_009711 - RH8049  122538.00  1AC073130, AC073130, AF260225