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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_026397
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_026397AC019168472615931RH4530312222.30    2AC084037, AC090998, AC019168, AC084037, AC090998
S/G/Y/R/B/O NT_026397AC090998472073151RH14340  121895.00  1AC019168, AC019168, AC090998
S/G/Y/R/B/O NT_026397AC079461472437751          
S/G/Y/R/B/O NT_026397AC084037473961141RH4417412218.92    1AC019168, AC090998, AC019168, AC084037, AC090998
S/G/Y/R/B/O NT_026397AC084037473971991RH7015412222.20    1AC019168, AC090998, AC019168, AC084037, AC090998
S/G/Y/R/B/O NT_026397AC084037474026881RH6755012222.20    1AC090998, AC084037, AC090998
S/G/Y/R/B/O NT_026397AC084037474027321RH4530312222.30    2AC019168, AC090998, AC019168, AC084037, AC090998
S/G/Y/R/B/O NT_026397AC067739472924291RH1671212228.79    1AC019168, AC090998, AC019168, AC067739, AC090998
S/G/Y/R/B/O NT_026397AC067739472924871RH9268812227.87    1AC090998, AC067739, AC090998
S/G/Y/R/B/O NT_026397AC067739472944181RH5292712225.96    1AC019168, AC090998, AP001501, AC019168, AC067739, AC090998, AP001501
S/G/Y/R/B/O NT_026397AC067739472944181WI-15126    12327.801AC019168, AC090998, AP001501, AC019168, AC067739, AC090998, AP001501
S/G/Y/R/B/O NT_026397AC067739472952621RH5310912226.06    1AC019168, AC090998, AP001501, AC019168, AC067739, AC090998, AP001501
S/G/Y/R/B/O NT_026397AC067739472952621WI-16236    12324.101AC019168, AC090998, AP001501, AC019168, AC067739, AC090998, AP001501
S/G/Y/R/B/O NT_026397AC067739472959531RH10412612227.66    1AC019168, AC090998, AC019168, AC067739, AC090998
S/G/Y/R/B/O NT_026397AC067739473338641RH10441312227.66    1AC019168, AC090998, AP001501, AC019168, AC067739, AC090998, AP001501
S/G/Y/R/B/O NT_026397AC027098473311141          
S/G/Y/R/B/O NT_026397AP001501473401831          
S/G/Y/R/B/O NT_026397AC025154474731281RH3970812226.06    1AC025361, AC027098, AC067739, AP001501, AC025154, AC025361, AC027098, AC067739, AP001501, D31846
S/G/Y/R/B/O NT_026397AC025154474940941RH9891512226.06    1AC025361, AC027098, AC067739, AP001501, AC025154, AC025361, AC027098, AC067739, AP001501
S/G/Y/R/B/O NT_026397AC025154474941861RH9874412226.26    1AC025361, AC027098, AC067739, AP001501, AC025154, AC025361, AC027098, AC067739, AP001501
S/G/Y/R/B/O NT_026397AC025154475064321RH3989212195.96    2AC008127, AC025361, AC027098, AC067739, AC089986, AP001501, AC008127, AC025154, AC025361, AC027098, AC067739, AC089986, AP001501
S/G/Y/R/B/O NT_026397AC025154476075421RH5304912226.06    1AC025361, AC074032, AC025154, AC025361, AC074032
S/G/Y/R/B/O NT_026397AC025154476075421WI-22480    12327.801AC025361, AC074032, AC025154, AC025361, AC074032
S/G/Y/R/B/O NT_026397AC025154476075881RH7070512226.26    1AC025361, AC074032, AC025154, AC025361, AC074032
S/G/Y/R/B/O NT_026397AC025154476242781RH4701612226.06    2AC074032, AC025154, AC074032, M36917
S/G/Y/R/B/O NT_026397AC025154476244851RH5271012226.06121923.00  2AC074032, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC025154476244851SGC32103    12327.802AC074032, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC025154476247001RH2582412226.16    2AC074032, AC025154, AC074032, M36917
S/G/Y/R/B/O NT_026397AC025154476351211RH1748712226.06    2AC074032, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC025154476352651RH4706712226.06    2AC074032, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC074032475440251RH5262712226.06    1AC025154, AC025361, AC067739, AP001501, AC025154, AC025361, AC067739, AC074032, AP001501
S/G/Y/R/B/O NT_026397AC074032475440251WI-17598    12324.201AC025154, AC025361, AC067739, AP001501, AC025154, AC025361, AC067739, AC074032, AP001501
S/G/Y/R/B/O NT_026397AC074032476446121RH4701612226.06    2AC025154, AC025154, AC074032, M36917
S/G/Y/R/B/O NT_026397AC074032476448191RH5271012226.06121923.00  2AC025154, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC074032476448191SGC32103    12327.802AC025154, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC074032476450341RH2582412226.16    2AC025154, AC025154, AC074032, M36917
S/G/Y/R/B/O NT_026397AC074032476554561RH1748712226.06    2AC025154, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC074032476556001RH4706712226.06    2AC025154, AC025154, AC074032
S/G/Y/R/B/O NT_026397AC074032476646401RH5278912226.06    1 AC074032
S/G/Y/R/B/O NT_026397AC074032476646401WI-19991    12323.201 AC074032
S/G/Y/R/B/O NT_026397AC074032476675091RH6716812226.06    1 AC074032
S/G/Y/R/B/O NT_026397AC074032476743321RH5266412224.15    1 AC074032
S/G/Y/R/B/O NT_026397AC074032476743321WI-9525    12319.001 AC074032
S/G/Y/R/B/O NT_026397AC074032476743321RH5274412225.86    1 AC074032
S/G/Y/R/B/O NT_026397AC074032476743321NIB1689    12328.001 AC074032
S/G/Y/R/B/O NT_026397AC074032476743621RH2520712226.16    1 AC074032
S/G/Y/R/B/O NT_026397AC074032476743651RH1016712226.16    1 AC074032
S/G/Y/R/B/O NT_026397AC025361475576701          
S/G/Y/R/B/O NT_026397AC020612477690793RH4803012222.20    1AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC020612477693453RH6842112223.12    1AC084037, AC020612, AC084037


  NT_026397 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_026397AC020612477707783RH5276212221.80    1AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC020612477707783WI-17686    12316.001AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC020612477729653RH9141212221.45    1AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC020612477730303RH7506412221.45    1AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC020612477748933RH7788012221.88    1AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC020612477772483RH3978912221.45    1AC084037, AC020612, AC084037
S/G/Y/R/B/O NT_026397AC078826478464291RH3970012220.33    1AC020612, AC079461, AC079849, AC009246, AC020612, AC078826, AC079461, AC079849
S/G/Y/R/B/O NT_026397AC078826478554331RH4188812220.22    1AC020612, AC079461, AC079849, AC009246, AC020612, AC078826, AC079461, AC079849
S/G/Y/R/B/O NT_026397AC079849479171581RH32679  121899.00  1AC078826, AC079461, AC009246, AC078826, AC079461, AC079849
S/G/Y/R/B/O NT_026397AC079849479190401RH2517712220.22    1AC078826, AC079461, AC009246, AC078826, AC079461, AC079849
S/G/Y/R/B/O NT_026397 - RH1750212224.56    0  
S/G/Y/R/B/O NT_026397 - RH1758012225.96    0AC027562, AC027562
S/G/Y/R/B/O NT_026397 - RH1765712222.40    2AC027562, AC027562, AC055736, AC055736, AC027562, AC027562, AC055736, AC055736
S/G/Y/R/B/O NT_026397 - RH3991612226.06    0  
S/G/Y/R/B/O NT_026397 - RH4459712226.06    0  
S/G/Y/R/B/O NT_026397 - RH4471812226.06    0  
S/G/Y/R/B/O NT_026397 - RH4841812226.06    0  
S/G/Y/R/B/O NT_026397 - RH5278612226.06    0  
S/G/Y/R/B/O NT_026397 - RH6519012226.06    0  
S/G/Y/R/B/O NT_026397 - RH6587412224.46    0AC090058, AC090058
S/G/Y/R/B/O NT_026397 - RH7119112226.06    0  
S/G/Y/R/B/O NT_026397 - RH7853712221.88    0  
S/G/Y/R/B/O NT_026397 - RH8040712223.63    1AC073573, AC021072, AC024216, AC073573
S/G/Y/R/B/O NT_026397 - RH8042212226.06    0