Chromosome 12 - RH Maps - Single Contig

Chromosome 12 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_009660

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009660	AC009771	106644333	1	RH60872	6	651.51	6	7010.00	6	859.20	2	AL031259, AL672310,	AL031259, AL672310
S/G/Y/R/B/O	NT_009660	AC009771	106645723	1	RH46730	6	649.46					2	AL031259, AL672310,	AC009771, AL031259, AL672310
S/G/Y/R/B/O	NT_009660	AC009780	107715631	1	RH52589	12	425.74					1		AC009780
S/G/Y/R/B/O	NT_009660	AC009780	107715631	1	WI-15287					12	522.70	1		AC009780
S/G/Y/R/B/O	NT_009660	AC009729	106812601	3	WI-4055					12	516.50	1	AC009780,	AC009729, AC009780
S/G/Y/R/B/O	NT_009660	AC009729	106928379	3	RH52621	12	426.13					1		AC009729
S/G/Y/R/B/O	NT_009660	AC009729	106928379	3	NIB1630					12	522.90	1		AC009729
S/G/Y/R/B/O	NT_009660	AC009729	106967971	3	RH47923	12	424.23					1	AC063957,	AC009729, AC063957
S/G/Y/R/B/O	NT_009660	AC063957	106970040	3	RH75931	12	429.27					1		AC063957
S/G/Y/R/B/O	NT_009660	AC063957	106988516	3	RH31260			12	4585.00			1		AC063957
S/G/Y/R/B/O	NT_009660	AC063957	106988516	3	RH42683	12	428.95					1		AC063957
S/G/Y/R/B/O	NT_009660	AC010206	107112691	3	RH92151	12	424.13					1		AC010206
S/G/Y/R/B/O	NT_009660	AC010206	107199288	3	RH79264	12	424.33					1	AC008119,	AC008119, AC010206
S/G/Y/R/B/O	NT_009660	AC010206	107200685	3	RH53076	12	424.03					1	AC008119,	AC008119, AC010206
S/G/Y/R/B/O	NT_009660	AC010206	107200685	3	WI-17609					12	518.00	1	AC008119,	AC008119, AC010206
S/G/Y/R/B/O	NT_009660	AC010206	107200842	3	RH26446	12	425.74					1	AC008119,	AC008119, AC010206
S/G/Y/R/B/O	NT_009660	AC010206	107201142	3	RH52951	12	424.03					1	AC008119,	AC008119, AC010206
S/G/Y/R/B/O	NT_009660	AC010206	107201142	3	SGC31638					12	518.00	1	AC008119,	AC008119, AC010206
S/G/Y/R/B/O	NT_009660	AC008119	107247583	3	RH1970			12	4603.00			1		AC008119
S/G/Y/R/B/O	NT_009660	AC008119	107247662	3	RH16836	12	428.95					1		AC008119
S/G/Y/R/B/O	NT_009660	AC008119	107268325	3	RH92385	12	424.13					1	AC007569,	AC007569, AC008119
S/G/Y/R/B/O	NT_009660	AC008119	107301139	3	RH1827			12	4607.00			1	AC007569,	AC007569, AC008119, U25956
S/G/Y/R/B/O	NT_009660	AC008119	107301286	3	RH39877	12	425.74					1	AC007569,	AC007569, AC008119, U25956
S/G/Y/R/B/O	NT_009660	AC007569	107306742	1	RH42095	12	429.27			12	526.40	1		AC007569
S/G/Y/R/B/O	NT_009660	AC007569	107306742	1	RH33821			12	4611.00			1		AC007569
S/G/Y/R/B/O	NT_009660	AC007569	107323560	1	RH52935	12	425.74					1		AC007569
S/G/Y/R/B/O	NT_009660	AC007569	107323560	1	SGC32397					12	522.90	1		AC007569
S/G/Y/R/B/O	NT_009660	AC007569	107325045	1	RH76381	12	423.73					1		AC007569
S/G/Y/R/B/O	NT_009660	AC087893	107434283	1	RH10106	12	428.85					1		AC087893
S/G/Y/R/B/O	NT_009660	AC087893	107439073	1	RH52932	12	427.28			12	523.10	1	AC008081,	AC008081, AC087893
S/G/Y/R/B/O	NT_009660	AC087893	107439237	1	RH39901	12	430.81					1	AC008081,	AC008081, AC087893
S/G/Y/R/B/O	NT_009660	AC008081	107458286	1	D12S105					12	523.10	1	AC087893,	AC008081, AC087893, D11370
S/G/Y/R/B/O	NT_009660	AC008081	107458286	1	RH355			12	4626.00			1	AC087893,	AC008081, AC087893, D11370
S/G/Y/R/B/O	NT_009660	AC008081	107553255	1	RH75480	12	427.38					1	AC007569, AC087893,	AC007569, AC008081, AC087893
S/G/Y/R/B/O	NT_009660	AC008081	107554877	1	RH45532	12	428.33					1	AC007569, AC087893,	AC007569, AC008081, AC087893
S/G/Y/R/B/O	NT_009660	AC008081	107557144	1	RH65932	12	424.33					1	AC007569, AC087893,	AC007569, AC008081, AC087893
S/G/Y/R/B/O	NT_009660		-		RH42904			12	4457.00			1	AC090011,	AC016253, AC090011
S/G/Y/R/B/O	NT_009660		-		RH8625			12	4485.00			1	AC009980, AC079174,	AC009980, AC026302, AC079174
S/G/Y/R/B/O	NT_009660		-		RH8993			12	4449.00			1	AC079385,	AC006294, AC079385