Chromosome 12 - RH Maps - Single Contig

Chromosome 12 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_009784

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009784	AC004466	45602324	3	WI-17447					12	296.50	1		AB002168
S/G/Y/R/B/O	NT_009784	AC004466	45602324	3	RH53012	12	197.62					1		AB002168
S/G/Y/R/B/O	NT_009784	AC004466	45604181	3	RH17584	12	210.95					1		AB002168, AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45635251	3	RH39833	12	210.76					1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45641481	3	RH69791	12	216.61					1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45652715	3	SGC30216					12	295.80	1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45652715	3	RH14361			12	1813.00			1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45652715	3	RH52985	12	202.82					1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45660000	3	WI-14839					12	294.00	1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45660000	3	RH52693	12	211.90					1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45662296	3	RH52669	12	215.84			12	295.90	1		AC004466
S/G/Y/R/B/O	NT_009784	AC004466	45663408	3	RH93449	12	211.47					1		AC004466
S/G/Y/R/B/O	NT_009784		-		RH27080	12	214.97					1	AL161457,	AC025021, AC091528, AL161457
S/G/Y/R/B/O	NT_009784		-		RH13900			12	1850.00			0
S/G/Y/R/B/O	NT_009784		-		RH44210	12	215.79					1	AC018698, AC090531,	AC018698, AC021137, AC025655, AC087895, AC090531, AC092973
S/G/Y/R/B/O	NT_009784		-		RH74632			12	1850.00			0		AC074029
S/G/Y/R/B/O	NT_009784		-		RH44408	12	216.50					0
S/G/Y/R/B/O	NT_009784		-		RH44661	12	215.90					1	AC018906, AC079601,	AC018906, AC079601
S/G/Y/R/B/O	NT_009784		-		RH45246	12	215.90					2	AC018906, AC079600, AC079601,	AC018906, AC079600, AC079601
S/G/Y/R/B/O	NT_009784		-		RH52894	12	215.46					1	AC018698, AC090531,	AC018698, AC021137, AC025655, AC087895, AC090531, AC092973
S/G/Y/R/B/O	NT_009784		-		RH52954	12	215.90					1	AC020629,	AC020629, AC024943
S/G/Y/R/B/O	NT_009784		-		RH53026	12	215.84			12	296.10	0
S/G/Y/R/B/O	NT_009784		-		RH80666	12	215.73					1	AC018906, AC079601,	AC018906, AC079601
S/G/Y/R/B/O	NT_009784		-		RH91637	12	215.29					0
S/G/Y/R/B/O	NT_009784		-		RH93881	12	216.45					1	AC024900,	AC011836, AC024900