Chromosome 12 - RH Maps - Single Contig

Chromosome 12 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_024413

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_024413	AC084375	3773685	1
S/G/Y/R/B/O	NT_024413	AC012599	3789109	3	RH75603	12	26.86					1	AC084375,	AC005842, AC012599, AC084375
S/G/Y/R/B/O	NT_024413	AC007207	3896216	3
S/G/Y/R/B/O	NT_024413	AC006122	4144941	3	RH36802	12	29.15					1		AC006122
S/G/Y/R/B/O	NT_024413	AC006122	4177709	3	RH70876	12	25.03					1
S/G/Y/R/B/O	NT_024413	AC006122	4177826	3	RH1717			12	255.00			1		AC006122
S/G/Y/R/B/O	NT_024413	AC006122	4183020	3	RH68283	12	25.03					1		AC006122
S/G/Y/R/B/O	NT_024413	AC008012	4232146	3	RH39817	12	25.03					1		AC008012
S/G/Y/R/B/O	NT_024413	AC008012	4237558	3	RH32358			12	248.00	12	61.40	1		AC008012
S/G/Y/R/B/O	NT_024413	AC008012	4365579	3	RH52508	12	25.03			12	61.40	1		AC008012
S/G/Y/R/B/O	NT_024413	AC008012	4365822	3	RH52572	12	25.03			12	61.40	1		AC008012
S/G/Y/R/B/O	NT_024413	AC008012	4367425	3	RH52616	12	29.15			12	59.60	1		AC008012
S/G/Y/R/B/O	NT_024413	AC092826	4382244	3
S/G/Y/R/B/O	NT_024413	AC005832	4437464	3	RH93251	12	29.15					1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4483919	3	CHLC.GATA25C06					12	59.40	1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4491393	3	RH44441	12	26.96					1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4491525	3	RH26418	12	25.03					1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4493382	3	RH92971	12	25.03					1
S/G/Y/R/B/O	NT_024413	AC005832	4564857	3	RH17595	12	25.03					1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4564926	3	RH52781	12	26.96	12	191.00	12	59.30	1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4565024	3	RH14849			12	185.00			1		AC005832
S/G/Y/R/B/O	NT_024413	AC005832	4571727	3	RH53074	12	25.03			12	61.40	1		AC005832
S/G/Y/R/B/O	NT_024413	AC005833	4575155	3	RH45869	12	25.03					1		AC005833
S/G/Y/R/B/O	NT_024413	AC005833	4689445	3	RH52818	12	29.15					1		AC005833
S/G/Y/R/B/O	NT_024413	AC005833	4689445	3	WI-19183					12	58.60	1		AC005833
S/G/Y/R/B/O	NT_024413	AC005833	4689572	3	RH39903	12	25.03					1		AC005833
S/G/Y/R/B/O	NT_024413	AC006063	4728713	3	RH52695	12	25.03			12	61.40	1		AC006063
S/G/Y/R/B/O	NT_024413	AC006063	4728721	3	RH9951	12	26.86					1		AC006063
S/G/Y/R/B/O	NT_024413	AC006063	4729529	3	RH39819	12	25.03					1		AC006063
S/G/Y/R/B/O	NT_024413	AC006063	4736966	3	RH3449	12	26.96			12	59.30	1		AC006063
S/G/Y/R/B/O	NT_024413	AC006063	4789201	3	RH78540	12	26.96					1		AC006063
S/G/Y/R/B/O	NT_024413	AC006063	4795754	3	RH52968	12	29.15			12	59.60	1		AC006063
S/G/Y/R/B/O	NT_024413	AC006063	4795852	3	RH77744	12	29.15					1		AC006063
S/G/Y/R/B/O	NT_024413	AC005906	4845427	3
S/G/Y/R/B/O	NT_024413	AC022362	5031161	3
S/G/Y/R/B/O	NT_024413	AC006206	5099493	3	D12S93					12	59.30	1		AC006206
S/G/Y/R/B/O	NT_024413	AC006206	5099493	3	RH49030	12	28.65					1		AC006206
S/G/Y/R/B/O	NT_024413	AC006206	5119670	3	RH49539	12	29.93					1		AC006206
S/G/Y/R/B/O	NT_024413	AC006206	5119670	3	RH31548			12	270.00			1		AC006206
S/G/Y/R/B/O	NT_024413	AC006206	5223565	3	RH53106	12	25.13			12	61.60	1		AC006206
S/G/Y/R/B/O	NT_024413	AC007848	5327285	3	RH48860	12	31.56					1		AC007848
S/G/Y/R/B/O	NT_024413	AC007848	5333204	3	RH15248	12	31.56					1		AC007848
S/G/Y/R/B/O	NT_024413	AC007848	5333204	3	RH1114			12	282.00			1		AC007848
S/G/Y/R/B/O	NT_024413		-		RH44631	12	26.86					1	AC006057,	AC006057
S/G/Y/R/B/O	NT_024413		-		RH31222			12	197.00			0		AC005842
S/G/Y/R/B/O	NT_024413		-		RH52680	12	29.15					0
S/G/Y/R/B/O	NT_024413		-		RH78819	12	31.56					1	AC090515,	AC019299, AC022465, AC027358, AC090515