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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_019546
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019546AC079861797831601          
S/G/Y/R/B/O NT_019546AC018679797834531          
S/G/Y/R/B/O NT_019546AC079362798153413          
S/G/Y/R/B/O NT_019546AC079457798812683          
S/G/Y/R/B/O NT_019546AC068993801609733WI-1782    12421.001 AC021912, AC068993, AC068994
S/G/Y/R/B/O NT_019546AC073606802315623RH5282612319.90123124.0012420.901 AC021912, AC073606, AL591965
S/G/Y/R/B/O NT_019546AC073606802664453RH4423612349.94    1 AC021912, AC021912, AC068849, AC073606, AL591965
S/G/Y/R/B/O NT_019546AC073606803108353RH5258012319.69  12420.901AC090709, AC061966, AC068849, AC073606, AC090709, AL591965
S/G/Y/R/B/O NT_019546AC090709803287521          
S/G/Y/R/B/O NT_019546AC073616804265713RH4794412319.69    1AC090709, AC061966, AC073616, AC090709
S/G/Y/R/B/O NT_019546AC073572805844283RH5271312321.31  12421.101 AC073572
S/G/Y/R/B/O NT_019546AC078917806006023          
S/G/Y/R/B/O NT_019546AC073570807475663RH14857  123121.00  1 AC073570
S/G/Y/R/B/O NT_019546AC027288807864703RH5242212319.69123121.0012421.001 AC027288
S/G/Y/R/B/O NT_019546AC027288807875173RH7574712319.69    1 AC027288
S/G/Y/R/B/O NT_019546AC027288807879433RH1769912319.69    1 AC027288
S/G/Y/R/B/O NT_019546AC027288807881973RH5269812320.07  12421.001 AC027288
S/G/Y/R/B/O NT_019546AC027288807884483RH4730412319.69    1 AC027288
S/G/Y/R/B/O NT_019546AC027288807889433RH14848  123128.00  1 AC027288
S/G/Y/R/B/O NT_019546AC027288807890183RH7854912349.94    1 AC027288
S/G/Y/R/B/O NT_019546AC027288807890953RH2506312349.76    1 AC027288
S/G/Y/R/B/O NT_019546AC027288809222243RH6796912320.98    1 AC027288
S/G/Y/R/B/O NT_019546AC027288809252343RH4813512319.90    1 AC027288
S/G/Y/R/B/O NT_019546AC027288809273173RH3980112319.69    1 AC027288
S/G/Y/R/B/O NT_019546AC027288809326133RH5275312320.01  12421.001AC073595, AC027288, AC073595
S/G/Y/R/B/O NT_019546AC073595809386383RH6593312319.69    1 AC073595
S/G/Y/R/B/O NT_019546AC073569811115403RH5258712319.69  12421.001 AC007949, AC073569
S/G/Y/R/B/O NT_019546AC073569811118123RH7010912320.98    1 AC007949, AC073569
S/G/Y/R/B/O NT_019546AC073569811491153RH5298912320.01    1 AC007949, AC027223, AC073569
S/G/Y/R/B/O NT_019546AC073569811491153WI-17053    12408.501 AC007949, AC027223, AC073569
S/G/Y/R/B/O NT_019546AC073569811562593RH4629312318.13    1 AC007949, AC073569
S/G/Y/R/B/O NT_019546AC018476811898533RH4423512319.69    1 AC018476, AC027223
S/G/Y/R/B/O NT_019546AC018476811911833RH4480512319.90    1 AC018476, AC027223
S/G/Y/R/B/O NT_019546AC018476812076043RH6717712320.07    1 AC018476, AC027223
S/G/Y/R/B/O NT_019546AC074270812114673          
S/G/Y/R/B/O NT_019546AC074272813500703          
S/G/Y/R/B/O NT_019546AC078817813875583          
S/G/Y/R/B/O NT_019546AC092945815954231          
S/G/Y/R/B/O NT_019546AC083812816710163          
S/G/Y/R/B/O NT_019546AC074031818948503RH9190912325.24    1 AC074031
S/G/Y/R/B/O NT_019546AC025568820143763RH5306912321.31  12419.401 AC025568, AC078825
S/G/Y/R/B/O NT_019546AC025568820143993RH1809812324.17    1 AC025568, AC078825
S/G/Y/R/B/O NT_019546AC025568820144383RH6828812326.77    1 AC025568, AC078825
S/G/Y/R/B/O NT_019546AC025568820223473RH5265912350.08  12455.101 AC025568, AC078825
S/G/Y/R/B/O NT_019546AC025568820244703RH9039  123160.00  1 AC025568, AC078825
S/G/Y/R/B/O NT_019546AC025568820979413WI-21474    12424.001 AC025568
S/G/Y/R/B/O NT_019546AC025568820979413RH5296712324.31    1 AC025568
S/G/Y/R/B/O NT_019546AC025568820979623RH4446712324.17    1 AC025568
S/G/Y/R/B/O NT_019546AC025568820987633RH2552212347.72    1 AC025568
S/G/Y/R/B/O NT_019546AC025568821169253RH6611712349.54    1 AC025568


  NT_019546 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019546AC078886821448323          
S/G/Y/R/B/O NT_019546AC068798821803353          
S/G/Y/R/B/O NT_019546AC078955823368063CHLC.GATA81H07    12421.001 AC078955
S/G/Y/R/B/O NT_019546AC004550824519873RH10292012323.74    1 AC004550, AC011321, AC012090
S/G/Y/R/B/O NT_019546AC004550824533663RH4604312348.47    1 AC004550, AC012090
S/G/Y/R/B/O NT_019546AC004550824540183RH4411712321.31    1 AC004550, AC012090
S/G/Y/R/B/O NT_019546 - RH4644812321.52    1AC025316, AC089998, AC025316, AC089998
S/G/Y/R/B/O NT_019546 - RH31249  123018.00  0 AC025567
S/G/Y/R/B/O NT_019546 - RH5281712320.50    0AC073552, AC073552
S/G/Y/R/B/O NT_019546 - RH32787  123013.00  1AC053520, AC079360, AC084018, AC053520, AC079360, AC084018
S/G/Y/R/B/O NT_019546 - RH8583  123018.00  0 AC025567
S/G/Y/R/B/O NT_019546 - RH8691  123018.00  1AL136294, AL157915, AC025567, AL136294, AL157915, U95018