Chromosome 12 - RH Maps - Single Contig

Chromosome 12 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_009601

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009601	AC010178	114586616	1	RH44581	12	444.50					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114593240	1	RH52891	12	445.11			12	559.20	1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114593241	1	RH25786	12	442.66					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114593408	1	RH10127	12	445.11					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114593778	1	RH79706	12	443.85					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114644712	1	RH52526	12	445.11			12	559.20	1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114672276	1	RH94379	12	445.11					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114674678	1	RH44764	12	444.78					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114674744	1	RH75728	12	442.66					1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114675705	1	RH52792	12	444.28			12	559.20	1		AC010178
S/G/Y/R/B/O	NT_009601	AC010178	114676099	1	RH39752	12	445.11					1		AC010178
S/G/Y/R/B/O	NT_009601	AC009773	114828487	3	D12S870					12	560.80	1		AC009773
S/G/Y/R/B/O	NT_009601	AC009772	114857698	3	WI-1900					12	560.80	1		AC009772
S/G/Y/R/B/O	NT_009601	AC020610	114967399	3	CHLC.GCT1C5					12	563.90	1		AC020610, AC074267
S/G/Y/R/B/O	NT_009601	AC009731	115090321	3	RH52625	12	446.48			12	562.40	1		AC009731
S/G/Y/R/B/O	NT_009601	AC009731	115100005	3	RH39862	12	447.10					1		AC009731
S/G/Y/R/B/O	NT_009601	AC009731	115100130	3	RH103193	12	443.42					1		AC009731
S/G/Y/R/B/O	NT_009601	AC009731	115105323	3	RH75457	12	457.17					1		AC009731
S/G/Y/R/B/O	NT_009601	AC009731	115151418	3	RH39704	12	456.34					1		AC009731
S/G/Y/R/B/O	NT_009601	AC073863	115187609	3
S/G/Y/R/B/O	NT_009601	AC090669	115219089	1
S/G/Y/R/B/O	NT_009601	AC009776	115228167	1
S/G/Y/R/B/O	NT_009601	AL080279	115595802	2	RH103950	12	443.37					1	AC009260, AC069240,	AC009260, AC069240, AL080279
S/G/Y/R/B/O	NT_009601	AL080279	115598416	2	SGC44506					12	566.70	1	AC009260, AC069240,	AC009260, AC069240, AL080279
S/G/Y/R/B/O	NT_009601	AL080279	115598416	2	RH52733	12	456.34					1	AC009260, AC069240,	AC009260, AC069240, AL080279
S/G/Y/R/B/O	NT_009601	AL080279	115598446	2	RH103223	12	444.13					1	AC009260, AC069240,	AC009260, AC069240, AL080279
S/G/Y/R/B/O	NT_009601	AC009260	115541284	1	RH70967	12	447.23					1	AC009776, AL080279,	AC009260, AC009776, AL080279
S/G/Y/R/B/O	NT_009601	AC009260	115558680	1	RH49541	12	446.59	12	4927.00			1	AC009776, AL080279,	AC009260, AC009776, AL080279
S/G/Y/R/B/O	NT_009601	AC078862	115289414	3
S/G/Y/R/B/O	NT_009601	AC010183	115345777	3
S/G/Y/R/B/O	NT_009601	AC069240	115607187	3
S/G/Y/R/B/O	NT_009601	AC010177	115789292	1	WI-9794					12	566.60	1	AC069240,	AC010177, AC069240
S/G/Y/R/B/O	NT_009601	AC010177	115838777	1	WI-5732					12	568.20	1		AC010177
S/G/Y/R/B/O	NT_009601	AC010177	115846453	1	RH76435	12	456.96					1	AC026765,	AC010177, AC026765
S/G/Y/R/B/O	NT_009601	AC010177	115847655	1	RH69906	12	446.38					1	AC026765,	AC010177, AC026765
S/G/Y/R/B/O	NT_009601	AC010177	115848431	1	RH102845	12	455.70					1	AC026765,	AC010177, AC026765
S/G/Y/R/B/O	NT_009601	AC026765	115860139	3
S/G/Y/R/B/O	NT_009601	AC021195	115983564	1
S/G/Y/R/B/O	NT_009601		-		RH103133	12	445.11					0
S/G/Y/R/B/O	NT_009601		-		RH52759	12	444.28					0