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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009775
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009775AC0263321199156271          
S/G/Y/R/B/O NT_009775AC0878801199258383          
S/G/Y/R/B/O NT_009775AC0878921200576883RH334912467.11  12578.801AC087880, AC087880, AC087892
S/G/Y/R/B/O NT_009775AC0878921201235263RH5311212467.11  12578.801 AC087892
S/G/Y/R/B/O NT_009775AC0878921201313123RH31267  125047.00  1 AC087892
S/G/Y/R/B/O NT_009775AC0878631202797123AFM330YH9    12578.801 AC087863
S/G/Y/R/B/O NT_009775AC0878851203410293          
S/G/Y/R/B/O NT_009775AC0843611205526213RH7577612465.20    1AC009819, AC084880, AC009819, AC084361, AC084880
S/G/Y/R/B/O NT_009775AC0843611205537723RH9415212465.51    1AC009819, AC084880, AC009819, AC084361, AC084880
S/G/Y/R/B/O NT_009775AC0848801205856051RH5269412465.41  12578.801 AC084880
S/G/Y/R/B/O NT_009775AC0098191206551171          
S/G/Y/R/B/O NT_009775AC0848811208485453RH9217712465.41    1 AC068791, AC073866, AC079909, AC084881
S/G/Y/R/B/O NT_009775AC0020701209612473WI-5762    12579.001 AC002070, AC068791, AC073866, AC079909
S/G/Y/R/B/O NT_009775AC0020701209763353RH1930  125199.00  1 AC002070, AC079909
S/G/Y/R/B/O NT_009775AC0025631210591313RH4890612464.45    1 AC002563
S/G/Y/R/B/O NT_009775AC0025631210713863RH5253412465.91  12580.101 AC002563, AC026363, AC079262, U87276
S/G/Y/R/B/O NT_009775AC0025631210721963RH5297412467.21  12579.001 AC002563, AC026363, AC079262, U87276
S/G/Y/R/B/O NT_009775AC0025631210723163RH1051612464.39    1 AC002563, AC026363, AC079262, U87276
S/G/Y/R/B/O NT_009775AC0025631210723343RH9883212467.21    1 AC002563, AC026363, AC079262, U87276
S/G/Y/R/B/O NT_009775AC0025631210768733RH4430812464.29    1 AC002563, AC026363, AC079262
S/G/Y/R/B/O NT_009775AC0025631211005813RH341112467.21  12579.001 AC002563
S/G/Y/R/B/O NT_009775AC0025631211005813RH571  125163.00  1 AC002563
S/G/Y/R/B/O NT_009775AC0025631211029803RH4805812464.39    1 AC002563, AC026363, AC079262, AC079317
S/G/Y/R/B/O NT_009775AC0025631211416623CHLC.GATA4H01.523    12579.001 AC002563, AC079317
S/G/Y/R/B/O NT_009775AC0048111211950413RH4500612467.21    1 AC004811, AC026363, AC079262, AC079317, AC079455
S/G/Y/R/B/O NT_009775AC0048131212318513WI-9988    12578.901 AC004813, AC026363, AC079262, AC079455
S/G/Y/R/B/O NT_009775AC0048151213248203          
S/G/Y/R/B/O NT_009775AC0048121214862823RH9134612467.21    1 AC004812, AC073865
S/G/Y/R/B/O NT_009775AC0048121214868173RH9859312467.21    1 AC004812, AC073865
S/G/Y/R/B/O NT_009775AC0048121214873733RH5247612465.91  12580.101 AC004812, AC073865
S/G/Y/R/B/O NT_009775AC0048121215183023RH5278412464.39  12579.001 AC004812, AC073865
S/G/Y/R/B/O NT_009775AC0048121215184213RH2542612464.45    1 AC004812, AC073865
S/G/Y/R/B/O NT_009775AC0048121215253473RH6579112465.41    1 AC004812, AC073865
S/G/Y/R/B/O NT_009775AC0042631215878023WI-9700    12578.801 AC004263, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631215880503RH5296412464.39  12579.701 AC004263, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631215907623RH5272212467.31  12579.001 AC004263, AC073865, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631215907713RH2642512465.41    1 AC004263, AC073865, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631216014833RH7830812465.51    1 AC004263, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631216015173RH1044412464.39    1 AC004263, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631216035153RH7497112464.49    1 AC004263, AC073865, AC073930
S/G/Y/R/B/O NT_009775AC0042631216733763RH7084512464.79    1 AC004263, AC073930, AC078926
S/G/Y/R/B/O NT_009775AC0042631216734613RH8062312457.27    1 AC004263, AC073930, AC078926
S/G/Y/R/B/O NT_009775AC0039821217323513RH5273012465.41  12579.801 AC003982, AC078926
S/G/Y/R/B/O NT_009775AL0215461218350633RH4883012464.39    1 AC078926, AL021546, Z97199
S/G/Y/R/B/O NT_009775AL0215461218351363RH4198712464.39    1 AC078926, AL021546, Z97199
S/G/Y/R/B/O NT_009775AL0215461218522903RH8057612466.62    1AC019360, AC063943, AC019360, AC063943, AL021546, Z97199
S/G/Y/R/B/O NT_009775AL0215461218525223RH3989412467.21    1AC019360, AC063943, AC019360, AC063943, AL021546, Z97199
S/G/Y/R/B/O NT_009775AL0215461218544493RH1068212467.21    1AC019360, AC063943, AC019360, AC063943, AL021546, U87279, Z97199
S/G/Y/R/B/O NT_009775AL0215461218544813RH4449312465.41    1AC019360, AC063943, AC019360, AC063943, AL021546, U87279, Z97199
S/G/Y/R/B/O NT_009775AC0193601218945511RH4448712466.71    2AC063943, AC063943, AC019360, AC063943, AC063943, Z97199


  NT_009775 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009775AC0639431219041151RH4448712466.71    2AC019360, AC019360, AC063943, AC063943, Z97199
S/G/Y/R/B/O NT_009775AC0639431219583081RH5267212467.21  12579.001 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219709451RH986312467.21    1 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219710981RH4515512464.39    1 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219713101RH1749612467.21    1 AC063943, AL022340
S/G/Y/R/B/O NT_009775AC0639431219714281RH33028  125085.0012580.201 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219714281RH5310412463.77    1 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219714731RH2628812465.38    1 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219732251RH14196  125098.00  1 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775AC0639431219734621RH6584712467.21    1 AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775 - RH4462012467.21    0 AL022340, Z97197
S/G/Y/R/B/O NT_009775 - RH1809  125089.00  1AC063942, AC069214, AC069234, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_009775 - D12S76    12579.000  
S/G/Y/R/B/O NT_009775 - RH4653812465.41    0AC063943, AC063943, AL022340, Z97197
S/G/Y/R/B/O NT_009775 - RH7810712464.45    0 AC073865