Home    Genome Browser    BLAT Search    Help
  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009759
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009759AC01674111          
S/G/Y/R/B/O NT_009759AC0263691343533RH654031214.49    1AC016741, AC016741, AC026369
S/G/Y/R/B/O NT_009759AC0074061440373RH52689123.57  1226.301AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074061440373SGC36815    1227.401AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074061441023RH286821214.49    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074061559893RH526031214.49  1230.301AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074061560003RH791351214.49    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074061865453RH930851214.49    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062063723WI-3041    1230.301AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062270293RH529071214.49  1230.301AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062398043RH1027431214.49    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062460373RH39849129.53    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062460373RH707791214.39    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062467943RH52900123.90  1227.501AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062468393RH441781214.49    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062475993RH475871214.49    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062485603RH68615127.33    1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062502353RH1782  1217.00  1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062509553RH8739  1227.00  1AC016741, AC007406, AC016741
S/G/Y/R/B/O NT_009759AC0074062587933RH70148129.53    1 AC007406
S/G/Y/R/B/O NT_009759AC0074062768343RH44598127.44    1 AC007406
S/G/Y/R/B/O NT_009759AC0058444078143RH475571214.49    1 AC005844
S/G/Y/R/B/O NT_009759AC0062055170253RH154341212.78  1230.301 AC006205
S/G/Y/R/B/O NT_009759AC0062055178443RH474531214.49    1 AC006205
S/G/Y/R/B/O NT_009759AC0062055280133RH931581214.59    1AC021054, AC006205, AC021054
S/G/Y/R/B/O NT_009759AC0210546102483RH912621214.49    1 AC021054
S/G/Y/R/B/O NT_009759AC0210546965933WI-5272    120.001AC004765, AC004765, AC021054
S/G/Y/R/B/O NT_009759AC0047657047333RH576  1239.00  1 AC004765
S/G/Y/R/B/O NT_009759AC0047657185333RH788461214.49    1 AC004765
S/G/Y/R/B/O NT_009759AC0047657659133D12S94    1230.301 AC004765
S/G/Y/R/B/O NT_009759AC0047657659133RH33797  120.00  1 AC004765
S/G/Y/R/B/O NT_009759AC0047657918643RH37960  120.00  1 AC004765
S/G/Y/R/B/O NT_009759AC0047658026643RH33221214.49  1230.401 AC004765
S/G/Y/R/B/O NT_009759AC0047658026643RH35139  1245.00  1 AC004765
S/G/Y/R/B/O NT_009759AC0047658082373RH685011214.59    1 AC004765
S/G/Y/R/B/O NT_009759AC0047658258093RH528221214.49  1230.301 AC004765
S/G/Y/R/B/O NT_009759AC0047658258333RH67594128.49    1 AC004765
S/G/Y/R/B/O NT_009759AC0047658339753SGC33532    1218.101 AC004765
S/G/Y/R/B/O NT_009759AC0048038673941RH397801216.69    1 AC004803
S/G/Y/R/B/O NT_009759AC0048038739771RH1780  120.00  1 AC004803
S/G/Y/R/B/O NT_009759AC09246910694233RH452171216.12    1AC004803, AC004803, AC092469
S/G/Y/R/B/O NT_009759AC00480211060303          
S/G/Y/R/B/O NT_009759AC00480411954993RH31218  1268.00  1 AC004804
S/G/Y/R/B/O NT_009759AC00480412659133RH256971219.00    1 AC004804
S/G/Y/R/B/O NT_009759AC00656112780143RH527941216.74  1233.301 AC006561
S/G/Y/R/B/O NT_009759AC00467213305593          
S/G/Y/R/B/O NT_009759AC00467114632093RH398901218.90    1 AC004671
S/G/Y/R/B/O NT_009759AC00467114657643RH917051218.90    1 AC004671
S/G/Y/R/B/O NT_009759AC00467115287243RH1032671217.90    1 AC004671
S/G/Y/R/B/O NT_009759AC00467115365133RH525381217.99  1235.201 AC004671


  NT_009759 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009759AC00518216200703RH495371218.901288.00  1 AC005182
S/G/Y/R/B/O NT_009759AC00518316279623          
S/G/Y/R/B/O NT_009759AC00534317122753RH662151218.90    1 AC005343
S/G/Y/R/B/O NT_009759AC00534317610973RH171331218.90    1 AC005343
S/G/Y/R/B/O NT_009759AC00534317645943RH443731218.90    1 AC005343
S/G/Y/R/B/O NT_009759AC00534220400153D12S100    1239.901 AC005342
S/G/Y/R/B/O NT_009759AC00534220400233RH1074  1297.00  1 AC005342
S/G/Y/R/B/O NT_009759AC00605120685703          
S/G/Y/R/B/O NT_009759AC00534421237613RH486691217.90    1 AC005344
S/G/Y/R/B/O NT_009759AC00534421345403RH269301217.90    1  
S/G/Y/R/B/O NT_009759AC00529322608023          
S/G/Y/R/B/O NT_009759AC00541424733553RH397231218.90    1 AC005414
S/G/Y/R/B/O NT_009759AC00541425052123WI-3910    1245.001 AC005414
S/G/Y/R/B/O NT_009759AC00586625494113WI-4081    1247.101 AC005866
S/G/Y/R/B/O NT_009759AC00586625752113RH74642  12101.00  1AC007618, AC005866, AC007618
S/G/Y/R/B/O NT_009759AC00586625925953RH1026461218.90    1AC007618, AC005866, AC007618
S/G/Y/R/B/O NT_009759AC00586625958133RH447991218.90    1AC007618, AC005866, AC007618
S/G/Y/R/B/O NT_009759AC00586626192163RH38014  12134.00  1AC007618, AC005866, AC007618
S/G/Y/R/B/O NT_009759AC00761826338801RH31220  12134.00  1 AC007618
S/G/Y/R/B/O NT_009759AC00761826642721RH530551217.40  1244.701 AC007618
S/G/Y/R/B/O NT_009759AC00761826656151RH934231217.99    1 AC007618
S/G/Y/R/B/O NT_009759AC00761826693571RH104771218.90    1 AC007618
S/G/Y/R/B/O NT_009759AC00761826694501RH445121217.90    1 AC007618
S/G/Y/R/B/O NT_009759AC00761826707021RH784111217.99    1AC092471, AC007618, AC092471
S/G/Y/R/B/O NT_009759AC09247127073511WI-3280    1251.801 AC092471
S/G/Y/R/B/O NT_009759AC00584127775603RH177461217.99    1AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584127775653RH526861217.99  1249.801AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584127775933RH679081218.90    1AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584127986153RH174811218.90    1AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584127988483RH527351217.9912111.001246.501AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584128188473WI-6086    1250.201AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584128332323RH764071218.90    1AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00584128337573RH527271217.9912130.001246.501AC092471, AC005841, AC092471
S/G/Y/R/B/O NT_009759AC00591128632123RH398261218.90    1AC092471, AC005911, AC092471
S/G/Y/R/B/O NT_009759AC00591129150913RH449631217.99    1 AC005911
S/G/Y/R/B/O NT_009759 - RH661111217.99    0 AC090840
S/G/Y/R/B/O NT_009759 - WI-14293    1215.500  
S/G/Y/R/B/O NT_009759 - RH661911216.12    0  
S/G/Y/R/B/O NT_009759 - RH666431214.49    0  
S/G/Y/R/B/O NT_009759 - RH921801217.90    0