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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_028327
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028327AC0692341220889481RH10299612469.33    1AC063942, AC063942, AC069234, Z97197
S/G/Y/R/B/O NT_028327AC0692341221184931RH5267912463.77  12580.101AC063942, AC069214, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692341221202251RH2861412470.24    1AC063942, AC069214, AC026977, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692341221206471RH2586512469.54    1AC063942, AC069214, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692341221222931RH1809  125089.00  1AC063942, AC069214, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692341221223771RH1721512464.49    1AC063942, AC069214, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692341221441511RH2624712469.13    1AC063942, AC069214, AC063942, AC069214, AC069234, Z80345, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692341229414911WI-2478    12580.301AC063942, AC069214, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692141221723621RH5271112469.42  12582.701AC063942, AC069234, AC063942, AC069214, AC069234, Z97197, Z97201
S/G/Y/R/B/O NT_028327AC0692141221761221RH9319912464.49    1AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0692141221767961RH2594612469.13    1AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0692141221772941IB383    12580.301AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0692141221772941RH5282912464.49    1AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0692141221773311RH6630312469.33    1AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0692141221774901WI-15518    12580.301AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0692141221774901RH5261312464.49    1AC063942, AC069234, AC063942, AC069214, AC069234, Z97201
S/G/Y/R/B/O NT_028327AC0263351222598851SGC34924    12580.301 AC026335, Z97201
S/G/Y/R/B/O NT_028327AC0263351222598851RH5309612464.49    1 AC026335, Z97201
S/G/Y/R/B/O NT_028327AC0263351222600131RH4459212469.33    1AC069214, AC078875, AC026335, AC069214, AC078875, Z93097, Z97201
S/G/Y/R/B/O NT_028327AC0788751223817041RH6974212469.33    1AC079602, AC078875, AC079602, Z93097
S/G/Y/R/B/O NT_028327AC0796021224135643D12S2088    12584.001AC078875, AC078875, AC079602, Z93097
S/G/Y/R/B/O NT_028327AC0796021224135643RH5291612466.91    1AC078875, AC078875, AC079602, Z93097
S/G/Y/R/B/O NT_028327AC0796021224328203RH6565612469.33    1AC078875, AC078875, AC079602, Z93097
S/G/Y/R/B/O NT_028327Z989411224711873RH10414012469.33    1AC079602, AC079602, Z98941
S/G/Y/R/B/O NT_028327AC0112161225216661          
S/G/Y/R/B/O NT_028327AC0692091225509021RH5263212469.62  12580.201AC011216, AC079602, Z98941, AC011216, AC069209, AC079602, Z98941
S/G/Y/R/B/O NT_028327AC0692091225980921RH7140812469.44    1AC011216, AC011216, AC069209, Y12855
S/G/Y/R/B/O NT_028327AC0692091226004501RH3980912469.62    1AC011216, AC011216, AC069209
S/G/Y/R/B/O NT_028327AC0692091226013631RH6652112469.44    1AC011216, AC011216, AC069209, Y12854
S/G/Y/R/B/O NT_028327AC0692091226104941RH10385312469.44    1AC011216, AC011216, AC069209
S/G/Y/R/B/O NT_028327AC0692091227802421RH1063612469.33    1AC048337, AC048337, AC069209
S/G/Y/R/B/O NT_028327AC0692091227802701RH5268212470.84    1AC048337, AC048337, AC069209
S/G/Y/R/B/O NT_028327AC0692091227802701WI-13062    12597.901AC048337, AC048337, AC069209
S/G/Y/R/B/O NT_028327AC0483371226412231RH7490012469.23    1AC011216, AC069209, AC011216, AC069209
S/G/Y/R/B/O NT_028327AC0483371226453401WI-19738    12580.301AC011216, AC069209, AC011216, AC048337, AC069209, AF321402
S/G/Y/R/B/O NT_028327AC0483371226453401RH5274612464.49    1AC011216, AC069209, AC011216, AC048337, AC069209, AF321402
S/G/Y/R/B/O NT_028327AC0483371226453841RH4418512469.44    1AC011216, AC069209, AC011216, AC048337, AC069209, AF321402
S/G/Y/R/B/O NT_028327AC0483371226481861SGC32416    12580.201AC011216, AC069209, AC011216, AC048337, AC069209
S/G/Y/R/B/O NT_028327AC0483371226482201RH7773912469.44    1AC011216, AC069209, AC011216, AC048337, AC069209, AF321402
S/G/Y/R/B/O NT_028327AC0483371226512341RH5254912466.91  12579.801AC011216, AC069209, AC011216, AC048337, AC069209
S/G/Y/R/B/O NT_028327AC0483371228598761NIB1331    12580.301AC009417, AC073650, AC009417, AC048337, AC073650
S/G/Y/R/B/O NT_028327AC0483371228598761RH5250312464.49    1AC009417, AC073650, AC009417, AC048337, AC073650
S/G/Y/R/B/O NT_028327AC0483371228598761RH5245012470.24  12581.801AC009417, AC073650, AC009417, AC048337, AC073650
S/G/Y/R/B/O NT_028327AC0483371228606811SGC32343    12580.301AC009417, AC073650, AC009417, AC048337, AC073650
S/G/Y/R/B/O NT_028327AC0483371228606811RH5278812464.49    1AC009417, AC073650, AC009417, AC048337, AC073650
S/G/Y/R/B/O NT_028327AC0483371229043481SGC34758    12580.301 AC048337
S/G/Y/R/B/O NT_028327AC0483371229043481RH5262912464.49    1 AC048337
S/G/Y/R/B/O NT_028327AC0094171227288071RH10362612464.49    1AC073650, AC009417, AC073650
S/G/Y/R/B/O NT_028327AC0736501227514471RH5297612468.93    1AC009417, AC009417, AC073650
S/G/Y/R/B/O NT_028327AC0736501227514471SGC31344    12579.901AC009417, AC009417, AC073650


  NT_028327 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028327AC0736501228222441RH5308012469.83  12580.201AC009417, AC009417, AC073650
S/G/Y/R/B/O NT_028327AC0736501228539491RH9427612470.14    1AC009417, AC009417, AC073650
S/G/Y/R/B/O NT_028327AC0639421229450901          
S/G/Y/R/B/O NT_028327 - RH10387912469.44    0AC063942, AC069214, AC069234, AC063942, AC069214, AC069234
S/G/Y/R/B/O NT_028327 - RH3982412469.62    0AC078875, AC079602, AC078875, AC079602, Z93097
S/G/Y/R/B/O NT_028327 - RH6621012469.13    0AC078875, AC079602, AC078875, AC079602, Z93097