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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009471
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009471AC069208249468253RH524801289.86  12167.301 AC069208
S/G/Y/R/B/O NT_009471AC069208249676093RH454631289.02    1 AC034120, AC069208
S/G/Y/R/B/O NT_009471AC092773250532991          
S/G/Y/R/B/O NT_009471AC092830252041643CHLC.GATA42B05    12171.201AC087312, AC087312
S/G/Y/R/B/O NT_009471AC092830252263563RH397951292.37    1AC087312, AC087312, AC092830
S/G/Y/R/B/O NT_009471AC087312253346063RH753391292.90    1 AC024025, AC087312
S/G/Y/R/B/O NT_009471AC093194253438393          
S/G/Y/R/B/O NT_009471AC023796254901033RH1032981292.63    1AC092867, AC023796, AC092867
S/G/Y/R/B/O NT_009471AC023796254914143RH446501292.63    1AC092867, AC023796, AC092867
S/G/Y/R/B/O NT_009471AC023796255098613WI-10837    12172.601AC092867, AC023796, AC092867
S/G/Y/R/B/O NT_009471AC092867255345553          
S/G/Y/R/B/O NT_009471AC026310255806333          
S/G/Y/R/B/O NT_009471AC023510257868203RH397451292.63    1AC025889, AC092794, AC023510, AC025889, AC092794
S/G/Y/R/B/O NT_009471AC023510257878123RH179911292.63    1AC025889, AC092794, AC023510, AC025889, AC092794
S/G/Y/R/B/O NT_009471AC023510257880393RH13992  121228.00  1AC025889, AC092794, AC023510, AC025889, AC092794
S/G/Y/R/B/O NT_009471AC023510257881253RH450391292.63    1AC025889, AC092794, AC023510, AC025889, AC092794
S/G/Y/R/B/O NT_009471AC023510257885203RH928031292.63    1AC092794, AC023510, AC092794
S/G/Y/R/B/O NT_009471AC025889258176981          
S/G/Y/R/B/O NT_009471AC092794258236191RH749811293.32    1 AC092794
S/G/Y/R/B/O NT_009471AC087239259051713          
S/G/Y/R/B/O NT_009471AC092451260831773          
S/G/Y/R/B/O NT_009471AC022367261554773          
S/G/Y/R/B/O NT_009471AC044811263286561          
S/G/Y/R/B/O NT_009471AC094009263347081          
S/G/Y/R/B/O NT_009471AC019209264243643RH421291298.67121245.00  1 AC019209, AC021868, AC087256
S/G/Y/R/B/O NT_009471AC024225265661463          
S/G/Y/R/B/O NT_009471AC055707266341773RH38201  121253.00  1 AC025637, AC055707
S/G/Y/R/B/O NT_009471AC055707266342153RH666261296.24    1 AC025637, AC055707
S/G/Y/R/B/O NT_009471AC055707266344743RH398741296.84    1 AC025637, AC055707
S/G/Y/R/B/O NT_009471AC055707266730263RH692901298.57    1 AC025637, AC055707
S/G/Y/R/B/O NT_009471AC055707267515813RH5294412105.37  12177.701 AC055707
S/G/Y/R/B/O NT_009471AC022509267998853RH3985112101.71    1 AC022509
S/G/Y/R/B/O NT_009471AC022509268002013RH10339712102.13    1 AC022509
S/G/Y/R/B/O NT_009471AC022509269103303RH6680912102.34    1 AC022509
S/G/Y/R/B/O NT_009471AC022509269122353RH74570  121272.00  1 AC022509
S/G/Y/R/B/O NT_009471AC022509269140153RH7844112101.71    1 AC022509
S/G/Y/R/B/O NT_009471AC055720269836413RH9364512101.71    1 AC055720
S/G/Y/R/B/O NT_009471AC055720270148743RH5276712104.76  12177.801 AC055720
S/G/Y/R/B/O NT_009471AC055720270149733RH1005512103.80    1 AC055720
S/G/Y/R/B/O NT_009471AC055720270165913RH2507412104.87    1 AC055720
S/G/Y/R/B/O NT_009471AC055720270169323RH9014  121261.00  1 AC055720
S/G/Y/R/B/O NT_009471AC055720270488973RH4495912101.71    1 AC055720
S/G/Y/R/B/O NT_009471AC024145270583973          
S/G/Y/R/B/O NT_009471AC023425271321603          
S/G/Y/R/B/O NT_009471AC023051273120083          
S/G/Y/R/B/O NT_009471AC024093275848133RH4447012105.96    1 AC024093
S/G/Y/R/B/O NT_009471AC024896276449601RH4476312105.96    1AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC024896276458781RH9301012105.26    1AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC024896276484631RH5304612105.96  12178.701AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC024896276531701RH5265712106.50  12178.901AC023261, AC023261, AC024896


  NT_009471 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009471AC024896276532621RH9148112105.26    1AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC024896276532731RH1004112105.20    1AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC024896276917091RH5297512106.44121284.0012178.701AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC024896276919021RH6642112105.96    1AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC023261276684951          
S/G/Y/R/B/O NT_009471AC092747277104693RH3988512103.09    1AC023261, AC024896, AC023261, AC024896, AC025970, AC092747
S/G/Y/R/B/O NT_009471AC092747277148083RH5263112105.26  12182.201AC023261, AC024896, AC023261, AC024896, AC025970, AC092747
S/G/Y/R/B/O NT_009471AC092827278586083          
S/G/Y/R/B/O NT_009471AC092829280078663RH9332312105.20    1AC092453, AC021737, AC092453, AC092829
S/G/Y/R/B/O NT_009471AC092829280078753RH1069112105.20    1AC092453, AC021737, AC092453, AC092829
S/G/Y/R/B/O NT_009471AC092453280890191          
S/G/Y/R/B/O NT_009471AC068794281071333RH9901312105.20    1 AC016008, AC068794
S/G/Y/R/B/O NT_009471AC087257281765473CHLC.ATA27A06    12183.301AC068794, AC016008, AC021971, AC068794, AC087257
S/G/Y/R/B/O NT_009471AC009509283605603RH1745312104.55    1 AC009509
S/G/Y/R/B/O NT_009471AC009509283767873RH9246812105.20    1 AC009509
S/G/Y/R/B/O NT_009471AC009509283785523RH9930412105.20    1 AC009509
S/G/Y/R/B/O NT_009471AC009509284339173RH4501312105.37    1 AC009509
S/G/Y/R/B/O NT_009471AC009509284379583RH9357712105.96    1 AC009509
S/G/Y/R/B/O NT_009471AC009509284380073RH5250112105.42  12178.901 AC009509
S/G/Y/R/B/O NT_009471AC009511284769573RH7037112105.20    1 AC009511
S/G/Y/R/B/O NT_009471AC009511284781033RH9207912105.20    1 AC009511
S/G/Y/R/B/O NT_009471AC009511284800903RH4884312105.20    1 AC009511
S/G/Y/R/B/O NT_009471AC009511284826023RH3969812105.20    1 AC009511
S/G/Y/R/B/O NT_009471AC009511284848773RH8043612105.31    1 AC009511
S/G/Y/R/B/O NT_009471AC009511284849193RH4433112105.20    1 AC009511
S/G/Y/R/B/O NT_009471AC008011286401153RH3976912122.46    1 AC008011, AC016393
S/G/Y/R/B/O NT_009471AC008011286402103RH5254712105.26121323.0012182.801 AC008011, AC016393
S/G/Y/R/B/O NT_009471AC008011286435583RH5305412105.20  12183.301 AC008011
S/G/Y/R/B/O NT_009471AC008011286435583RH8303  124226.00  1 AC008011
S/G/Y/R/B/O NT_009471AC008011286438393RH1769212105.20    1 AC008011
S/G/Y/R/B/O NT_009471AC008011286441513CHLC.GATA87E09    12178.901 AC008011
S/G/Y/R/B/O NT_009471AC008011286445703RH4840812105.20    1 AC008011, AC016393
S/G/Y/R/B/O NT_009471AC008011286452543RH3975112105.26    1 AC008011, AC016393
S/G/Y/R/B/O NT_009471AC008011286455733RH7553012124.19    1 AC008011
S/G/Y/R/B/O NT_009471AC008011286456523RH4808412105.20    1 AC008011
S/G/Y/R/B/O NT_009471AC022363286781543          
S/G/Y/R/B/O NT_009471AC022364287928993          
S/G/Y/R/B/O NT_009471AC022079288699233RH3981612106.01    1 AC022079
S/G/Y/R/B/O NT_009471AC024939290472453          
S/G/Y/R/B/O NT_009471AC046131291666643RH5261712105.20  12182.701 AC046131, AC073872
S/G/Y/R/B/O NT_009471AC084754293865533RH5273812105.26  12182.801AC022081, AC022081, AC053493, AC084754
S/G/Y/R/B/O NT_009471AC084754293865533RH38009  121347.00  1AC022081, AC022081, AC053493, AC084754
S/G/Y/R/B/O NT_009471AC022081293930543          
S/G/Y/R/B/O NT_009471AC024255295168193          
S/G/Y/R/B/O NT_009471AC012150298915643AFMA082XD9    12185.301 AC012150, AC025736
S/G/Y/R/B/O NT_009471AC009318299637403RH7544612107.31    1 AC009318
S/G/Y/R/B/O NT_009471AC009318299822403RH5248412109.31  12187.301 AC009318
S/G/Y/R/B/O NT_009471AC009318300135583RH5294612109.31121373.0012187.301 AC009318
S/G/Y/R/B/O NT_009471AC009318300157803RH9414112111.38    1 AC009318
S/G/Y/R/B/O NT_009471AC009318300173123RH5275812108.99  12187.901 AC009318


  NT_009471 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009471AC009318300194913RH7485112123.35    1 AC009318
S/G/Y/R/B/O NT_009471AC009318300196383RH10314512108.99    1 AC009318
S/G/Y/R/B/O NT_009471AC009318300223463RH10376712106.72    1 AC009318
S/G/Y/R/B/O NT_009471AC009318300228323RH8880  121373.00  1 AC009318
S/G/Y/R/B/O NT_009471AC009318300764893RH1184120197.42    2AL035420, AC009318, AC016510, AC079846, AL035420
S/G/Y/R/B/O NT_009471AC009318300977313RH6801612111.38    1 AC009318
S/G/Y/R/B/O NT_009471AC012151301830043RH7612712118.92    1 AC012151, AC079846, AL157824
S/G/Y/R/B/O NT_009471AC012151301831743RH9825712110.77    1 AC012151, AC079846, AL157824
S/G/Y/R/B/O NT_009471AC012151301832873RH9382312110.77    1 AC012151, AC079846, AL157824
S/G/Y/R/B/O NT_009471AC012151301872963RH3979012110.77    1 AC079846, AL157824
S/G/Y/R/B/O NT_009471AC022651301876921          
S/G/Y/R/B/O NT_009471 - RH1022631293.86    0  
S/G/Y/R/B/O NT_009471 - RH37824  121307.00  0AC009509, AC009509
S/G/Y/R/B/O NT_009471 - WI-10791    12165.501AC087260, AC022359, AC087260
S/G/Y/R/B/O NT_009471 - RH1035841289.54    1AC026134, AC090675, AC026134, AC087322, AC090675
S/G/Y/R/B/O NT_009471 - WI-10817    12168.701AC092864, AC092864
S/G/Y/R/B/O NT_009471 - RH2599312106.99    1AC010198, AC010198
S/G/Y/R/B/O NT_009471 - WI-3881    12168.701AC026134, AC090675, AC026134, AC090675
S/G/Y/R/B/O NT_009471 - RH3969412105.20    0  
S/G/Y/R/B/O NT_009471 - WI-5298    12179.301AC009510, AC009510
S/G/Y/R/B/O NT_009471 - RH3972012101.71    0  
S/G/Y/R/B/O NT_009471 - RH397371289.44    1AC087319, AC087319
S/G/Y/R/B/O NT_009471 - RH397981292.37    1AC011676, AC011676
S/G/Y/R/B/O NT_009471 - RH3981212102.13    0AC055707, AC055707
S/G/Y/R/B/O NT_009471 - RH398521292.63    0  
S/G/Y/R/B/O NT_009471 - RH455641289.86    0 AC087322
S/G/Y/R/B/O NT_009471 - RH4827412105.31    0  
S/G/Y/R/B/O NT_009471 - RH663381292.26    1AC087244, AC087244
S/G/Y/R/B/O NT_009471 - RH7788112107.16    0  
S/G/Y/R/B/O NT_009471 - RH787471293.90    0  
S/G/Y/R/B/O NT_009471 - RH808111292.32    1AC087244, AC087244
S/G/Y/R/B/O NT_009471 - RH9117712108.99    0  
S/G/Y/R/B/O NT_009471 - RH9156112110.77    0  
S/G/Y/R/B/O NT_009471 - RH9890612105.20    0