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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009563
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009563AC021103542076611          
S/G/Y/R/B/O NT_009563AC073611543848161RH1008712228.58    1AC021103, AC021103, AC073611, AJ297977
S/G/Y/R/B/O NT_009563AC073611543848851RH2656212227.87    1AC021103, AC021103, AJ297977
S/G/Y/R/B/O NT_009563AC073611543853481RH4443712227.69    1AC021103, AC021103, AC073611
S/G/Y/R/B/O NT_009563AC073611543930661RH14862  121960.00  1 AB055802, AC073611
S/G/Y/R/B/O NT_009563AC073611544063161RH4544112227.66    1AC021103, AC021103, AC073611
S/G/Y/R/B/O NT_009563AC073611552350631RH2583912228.07    2AC021103, AC068889, AL139112, AC021103, AC068889, AC073611, AL139112, AL356366
S/G/Y/R/B/O NT_009563AC073611552358611RH32632  122139.00  1AC021103, AC068889, AC021103, AC068889, AC073611
S/G/Y/R/B/O NT_009563AC073611552358611RH5303812227.66  12327.801AC021103, AC068889, AC021103, AC068889, AC073611
S/G/Y/R/B/O NT_009563AC073611552382251RH33542  122132.00  1AC068889, AC068889
S/G/Y/R/B/O NT_009563AC073611552382251RH5259712227.66  12326.001AC068889, AC068889
S/G/Y/R/B/O NT_009563AC073611552385771RH9321912227.66    1AC021103, AC068889, AC021103, AC068889, AC073611
S/G/Y/R/B/O NT_009563AC073611552396061RH4696812227.66    1AC021103, AC068889, AC021103, AC068889, AC073611
S/G/Y/R/B/O NT_009563AC073611552398201RH1729  122139.00  1AC021103, AC068889, AC021103, AC068889, AC073611
S/G/Y/R/B/O NT_009563AC068986543040461RH3984312229.92    1AC010892, AC023509, AC010892, AC023509, AC068986
S/G/Y/R/B/O NT_009563AC068986552616441RH7834  122163.00  1AC010892, AC073594, AC010892, AC068986, AC073594, X69908
S/G/Y/R/B/O NT_009563AC068986552618351RH2612312229.20    1AC010892, AC073594, AC010892, AC068986, AC073594, X69908
S/G/Y/R/B/O NT_009563AC073594542756611RH3985912230.23    1AC010892, AC068986, AC010892, AC068986
S/G/Y/R/B/O NT_009563AC073594542756631RH4496212229.20    1AC010892, AC023509, AC068986, AC010892, AC023509, AC068986, AC073594
S/G/Y/R/B/O NT_009563AC012144542312801          
S/G/Y/R/B/O NT_009563AC010892542367131          
S/G/Y/R/B/O NT_009563AC023509552916601RH10259812229.20    1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554084681RH5294312229.20    1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554084681WI-8969    12317.201AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554101611RH74621  122146.00  1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554192541RH7623012230.23    2AC007751, AC068889, AC090686, AC007751, AC023397, AC023509, AC068889, AC090686
S/G/Y/R/B/O NT_009563AC023509554193171RH3985312229.20    1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554583001RH1756912230.23    1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554583391RH6770512229.20    1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC023509554606061RH6891512229.20    1AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC068889552200431RH3988112227.79    1AC021103, AC073611, AC021103, AC068889, AC073611, U29700, X89013
S/G/Y/R/B/O NT_009563AC068889554489811RH6811012229.20    1AC023509, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC068889554499841RH5255112229.10  12329.001AC023509, AC023509, AC068889
S/G/Y/R/B/O NT_009563AC076968544402933RH5291912229.20  12329.001AC010892, AC068986, AC073594, AC010892, AC068986, AC073594, AC076968
S/G/Y/R/B/O NT_009563AC076968544403403RH3986712229.20    1AC010892, AC068986, AC073594, AC010892, AC068986, AC073594, AC076968
S/G/Y/R/B/O NT_009563AC076968545295503RH4230812232.34  12330.901 AC016458, AC076968
S/G/Y/R/B/O NT_009563AC076968545295503RH31539  122163.00  1 AC016458, AC076968
S/G/Y/R/B/O NT_009563AC012531546754233RH7606412234.43    1 AC012531
S/G/Y/R/B/O NT_009563AC012531547192293RH3980212234.38    1 AC012531
S/G/Y/R/B/O NT_009563AC012531547316733RH6877612234.38    1 AC012531
S/G/Y/R/B/O NT_009563AC012531547317163RH5257812243.00    1 AC012531
S/G/Y/R/B/O NT_009563AC012531547317163SGC35159    12314.501 AC012531
S/G/Y/R/B/O NT_009563AC012531547442303RH6568712240.60    1 AC012531
S/G/Y/R/B/O NT_009563AC012531547591023RH7627712241.12    1AC012144, AC023794, AC012144, AC012531, AC023794
S/G/Y/R/B/O NT_009563AC012531547592063RH3976712234.43    1AC012144, AC023794, AC012144, AC012531, AC023794
S/G/Y/R/B/O NT_009563AC023794547646011RH3990612234.38    1 AC023794, X61755
S/G/Y/R/B/O NT_009563AC023794548314611D12S103    12333.301 AC023794
S/G/Y/R/B/O NT_009563AC023794548717341WI-6102    14288.101 AC023794
S/G/Y/R/B/O NT_009563AC023794549196971RH9271412234.38    1AC025507, AC023794, AC025507
S/G/Y/R/B/O NT_009563AC023794549508341RH5292312241.02  12336.601AC025507, AC023794, AC025507


  NT_009563 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009563AC023794549554691RH10363712243.54    1AC025507, AC025507
S/G/Y/R/B/O NT_009563AC023794549684441RH5240612240.70  12334.601AC025507, AC023794, AC025507, AF489699
S/G/Y/R/B/O NT_009563AC023794549684871RH1011012236.93    1AC025507, AC023794, AC025507, AF489699
S/G/Y/R/B/O NT_009563AC023794549685711RH4432512236.93    1AC025507, AC023794, AC025507, AF489699
S/G/Y/R/B/O NT_009563AC025507549698131          
S/G/Y/R/B/O NT_009563AC078778550180781RH1317  122167.00  2AC023794, AC025507, AL356154, AC023794, AC025507, AC078778, AL356154
S/G/Y/R/B/O NT_009563AC078778550201691WI-12071    12336.101AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550201691RH5282012243.43    1AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550202291RH3671312242.82    1AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550215971RH6486112240.99    1AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550231611RH5300612240.41  12336.601AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550259771RH5292912236.34  12334.601AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550270881RH10222712244.47    1AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778550275231RH5257912236.93  12334.601AC025507, AC025507, AC078778
S/G/Y/R/B/O NT_009563AC078778553264111RH9362012239.46    1 AC078778
S/G/Y/R/B/O NT_009563AC078778553381241RH5268412236.83  12334.601 AC078778
S/G/Y/R/B/O NT_009563AC078778553394551RH6987212242.67    1 AC078778
S/G/Y/R/B/O NT_009563AC078778553448551RH5260612236.83  12334.601 AC078778
S/G/Y/R/B/O NT_009563AC078778553448641RH4473512236.73    1 AC078778
S/G/Y/R/B/O NT_009563AC078778554970161RH5309812236.83  12334.601 AC078778
S/G/Y/R/B/O NT_009563AC078778554977131RH7859512236.83    1 AC078778
S/G/Y/R/B/O NT_009563AC078778554978681RH5257512241.52  12336.501 AC078778
S/G/Y/R/B/O NT_009563AC019223551387511          
S/G/Y/R/B/O NT_009563AC079313555154403RH4408812236.73    1AC078778, AC078778, AC079313
S/G/Y/R/B/O NT_009563AC079313555423583RH7594612236.83    1AC078778, AC078778, AC079313
S/G/Y/R/B/O NT_009563AC079313555467463RH4798612236.83    1AC078778, AC078778, AC079313
S/G/Y/R/B/O NT_009563AC079313556020983RH4542812242.46    1 AC053540, AC079313
S/G/Y/R/B/O NT_009563AC079313556611973RH3972512236.83    1AC025570, AC025570, AC053540, AC079313
S/G/Y/R/B/O NT_009563AC025570556743273          
S/G/Y/R/B/O NT_009563AC068789556889583RH5262212236.73122170.0012334.401 AC053540, AC068789
S/G/Y/R/B/O NT_009563AC079310557251623RH7868812239.78    1 AC053540, AC079310
S/G/Y/R/B/O NT_009563AC079310557255733RH4448512236.34    1 AC053540, AC079310
S/G/Y/R/B/O NT_009563AC079310557865333RH7448412236.83    1AC107617, AC025686, AC079310, AC107617
S/G/Y/R/B/O NT_009563AC079310558376543WI-9949    12336.601AC107617, AC025686, AC079310, AC107617
S/G/Y/R/B/O NT_009563AC107617558892521          
S/G/Y/R/B/O NT_009563AC024091559656041          
S/G/Y/R/B/O NT_009563AC079842560816383RH5284812236.83  12336.601AC024091, AC024091, AC079842
S/G/Y/R/B/O NT_009563AC079842560816953RH9274612236.83    1AC024091, AC024091, AC079842
S/G/Y/R/B/O NT_009563AC027287561613243RH4863212244.41    1AC024091, AC024091, AC027287, AF203901
S/G/Y/R/B/O NT_009563AC027287562897013WI-6672    12338.401AC090048, AC022207, AC027287, AC090048
S/G/Y/R/B/O NT_009563AC090048563192381          
S/G/Y/R/B/O NT_009563 - RH1669212236.73    0AC078778, AC078778
S/G/Y/R/B/O NT_009563 - RH1748412241.62    0  
S/G/Y/R/B/O NT_009563 - RH1810312229.20    0AC023509, AC068889, AC023509, AC068889
S/G/Y/R/B/O NT_009563 - RH2625212236.83    0 AC053540
S/G/Y/R/B/O NT_009563 - RH4434912228.48    0  
S/G/Y/R/B/O NT_009563 - RH4541612240.91    0  
S/G/Y/R/B/O NT_009563 - RH9349812236.73    0