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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009526
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009526AC011603469320501RH3971012218.85    1 AC011603
S/G/Y/R/B/O NT_009526AC011603469336921RH4806312245.68    4AC010173, AC010173, AC026125, AC026125, AP002364, AC010173, AC010173, AC011603, AC026125, AC026125, AP002364, X01703
S/G/Y/R/B/O NT_009526AC026125470168131RH10387612219.13    1 AC026125
S/G/Y/R/B/O NT_009526AC026125470179061RH10231812219.13    1 AC026125
S/G/Y/R/B/O NT_009526AC026125470220531RH4655412219.13    1 AC026125
S/G/Y/R/B/O NT_009526AC026125470221641RH3979412219.13    1 AC026125
S/G/Y/R/B/O NT_009526AC026125470581581RH5264012218.96  12312.701AC010173, AC010173, AC026125
S/G/Y/R/B/O NT_009526AC026125470617311RH4806312245.68    4AC010173, AC010173, AC011603, AP002364, AC010173, AC010173, AC011603, AC026125, AC026125, AP002364, X01703
S/G/Y/R/B/O NT_009526AC010173459910181RH7584912217.82    1AC026125, AC010173, AC026125, L14565
S/G/Y/R/B/O NT_009526AC010173470753391RH5252412217.82  12312.301AC026125, AC010173, AC026125, X01703
S/G/Y/R/B/O NT_009526AC010173470753451RH5265312219.13121892.0012312.701 X01703
S/G/Y/R/B/O NT_009526AC010173470753451RH33317  121896.00  1AC026125, AC010173, AC026125, X01703
S/G/Y/R/B/O NT_009526AC010173470771541RH4806312245.68    4AC011603, AC026125, AC026125, AP002364, AC010173, AC010173, AC011603, AC026125, AC026125, AP002364, X01703
S/G/Y/R/B/O NT_009526AC010173471237421RH10435712219.28    1AC026125, AC010173, AC026125
S/G/Y/R/B/O NT_009526AC025256460210751RH10335912218.92    1AC011603, AC011603, AC025256, AF351620
S/G/Y/R/B/O NT_009526AC025256460210751RH9382612218.85    1AC011603, AC011603, AC025256, AF351620
S/G/Y/R/B/O NT_009526AC025256460283821RH4764112218.85    1AC011603, AC011603, AC025256
S/G/Y/R/B/O NT_009526AC025256468403271RH7637512217.54    1AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468658721RH2582212278.10    1AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468685531RH5256112218.37    1AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468685531WI-13060    12267.601AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468838641RH5260912217.06  12311.501AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468897891RH5305712216.61  12310.601AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468899551RH7774012217.11    1AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256468970491RH2660212217.33    1AC011603, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC025256469268001RH6728712217.11    1 AC025256, AC073610
S/G/Y/R/B/O NT_009526AC021647460386021RH9846812217.11    1 AC021647, AC073610
S/G/Y/R/B/O NT_009526AC021647460393231RH3982912217.11    1 AC021647, AC073610
S/G/Y/R/B/O NT_009526AC021647460535001RH5240212217.22  12305.101AC025256, AC021647, AC025256, AC073610
S/G/Y/R/B/O NT_009526AC021647460546151RH4694112217.11    1AC025256, AC021647, AC025256, AC073610, M74493
S/G/Y/R/B/O NT_009526AC021647460583431RH5265612217.22  12304.301AC025256, AC021647, AC025256, AC073610, M74493
S/G/Y/R/B/O NT_009526AC021647466898861RH1541712218.20    1AC025557, AC021647, AC025557
S/G/Y/R/B/O NT_009526AC021647467631861RH5291012217.17  12305.101AC025557, AC021647, AC025557
S/G/Y/R/B/O NT_009526AC021647467631891RH5288312217.28  12309.301AC025557, AC021647, AC025557
S/G/Y/R/B/O NT_009526AC021647467639191RH5283712217.33  12310.201AC025557, AC021647, AC025557
S/G/Y/R/B/O NT_009526AC021647467640221RH4416512217.28    1AC025557, AC021647, AC025557
S/G/Y/R/B/O NT_009526AC021647467650451RH5281612217.22  12305.101 AC021647
S/G/Y/R/B/O NT_009526AC021647467690711RH6806412217.11    1AC025557, AC021647, AC025557
S/G/Y/R/B/O NT_009526AC024257462196793RH7525112216.39    1 AC024257
S/G/Y/R/B/O NT_009526AC024257462225933WI-6377    12300.401 AC024257
S/G/Y/R/B/O NT_009526AC024257462225933RH5240112214.20    1 AC024257
S/G/Y/R/B/O NT_009526AC024257462238783RH2617912197.16    1 AC024257
S/G/Y/R/B/O NT_009526AC024257462245973RH5277012213.87  12295.801 AC024257
S/G/Y/R/B/O NT_009526AC024257462246073RH4740212215.79    1 AC024257
S/G/Y/R/B/O NT_009526AC024257462276653RH9409912212.51    1 AC024257
S/G/Y/R/B/O NT_009526AC090115462618243          
S/G/Y/R/B/O NT_009526AC089987463556303RH8084712213.98    2AC105250, AC089987, AC105250
S/G/Y/R/B/O NT_009526AC089987463786443RH9257112213.15    1AC079190, AC079190, AC089987
S/G/Y/R/B/O NT_009526AC089987464502523RH3974912215.19    1AC079190, AC079951, AC079190, AC079951, AC089987, X05153
S/G/Y/R/B/O NT_009526AC079951465360123RH6575712215.68    1 AC079951


  NT_009526 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009526AC079951465709303RH1741712215.73    1 AC079951
S/G/Y/R/B/O NT_009526AC079951465709723RH3974012215.68    1 AC079951
S/G/Y/R/B/O NT_009526AC079951465762503RH32848  121895.00  1 AC079951
S/G/Y/R/B/O NT_009526AC079951465762503RH5303012215.68  12295.901 AC079951
S/G/Y/R/B/O NT_009526AC079951465762503RH7042112213.76    1 AC079951
S/G/Y/R/B/O NT_009526AC079951465791783RH10401612215.68    1 AC079951
S/G/Y/R/B/O NT_009526AC009775466116453          
S/G/Y/R/B/O NT_009526AC025557466464851RH38159  121871.00  1 AC025557
S/G/Y/R/B/O NT_009526AC025557466540311RH2583812216.01    1 AC025557
S/G/Y/R/B/O NT_009526AC025557466542111RH7853412215.19    1 AC025557
S/G/Y/R/B/O NT_009526AC079190466322261          
S/G/Y/R/B/O NT_009526 - RH10360512220.22    0AC020612, AC078826, AC079461, AC009246, AC020612, AC078826, AC079461
S/G/Y/R/B/O NT_009526 - RH3972412217.00    1AC015540, AC015540
S/G/Y/R/B/O NT_009526 - RH4442712217.00    1AC015540, AC015540
S/G/Y/R/B/O NT_009526 - RH4687712219.13    0  
S/G/Y/R/B/O NT_009526 - RH5247012217.00    1AC024900, AC011836, AC024900
S/G/Y/R/B/O NT_009526 - RH5247912217.06  12310.801AC024900, AC011836, AC024900
S/G/Y/R/B/O NT_009526 - RH5280012217.00    1AC024900, AC011836, AC024900
S/G/Y/R/B/O NT_009526 - WI-21056    12312.501AC023055, AC073487, AC023055, AC073487
S/G/Y/R/B/O NT_009526 - RH6633912217.00    1AC016144, AC016144
S/G/Y/R/B/O NT_009526 - SGC34566    12312.601AC023055, AC073487, AC023055, AC073487
S/G/Y/R/B/O NT_009526 - RH6811612216.72    1AC107023, AC009943, AC016150, AC107023
S/G/Y/R/B/O NT_009526 - WI-16726    12312.701AC023055, AC073487, AC023055, AC073487
S/G/Y/R/B/O NT_009526 - RH6847512219.13    0  
S/G/Y/R/B/O NT_009526 - WI-11203    12312.701AC009779, AC009779
S/G/Y/R/B/O NT_009526 - RH7119412219.13    0  
S/G/Y/R/B/O NT_009526 - RH7780912218.26    0  
S/G/Y/R/B/O NT_009526 - RH8075612218.92    1AC079354, AC079354
S/G/Y/R/B/O NT_009526 - RH9179112217.11    0AC025256, AC025256
S/G/Y/R/B/O NT_009526 - RH9361512217.00    0