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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009575
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009575AC024708948511521          
S/G/Y/R/B/O NT_009575AC010703948708051          
S/G/Y/R/B/O NT_009575AC010203950926613RH5266512397.43  12492.101AC024708, AC010203, AC024708
S/G/Y/R/B/O NT_009575AC010203951050583RH9273112398.52    1AC024708, AC010203, AC024708
S/G/Y/R/B/O NT_009575AC010203951378393RH7601612396.49    1AC024708, AC010203, AC024708
S/G/Y/R/B/O NT_009575AC010203951577003RH5253312395.84  12492.201 AC010203
S/G/Y/R/B/O NT_009575AC010203951578133RH4419112397.43    1 AC010203
S/G/Y/R/B/O NT_009575AC010203951915493RH7924312395.84    1 AC010203
S/G/Y/R/B/O NT_009575AC026110952590243RH14229  124112.00  1 AC010204, AC026110
S/G/Y/R/B/O NT_009575AC026110953611503RH2693412398.74    1 AC010204, AC026110
S/G/Y/R/B/O NT_009575AC026110953747493RH4816112397.75    1 AC010204, AC026109, AC026110
S/G/Y/R/B/O NT_009575AC026110953762153RH5262612396.17  12492.301 AC010204, AC026110
S/G/Y/R/B/O NT_009575AC023054954401591RH4866212363.67    1AC090050, AC021562, AC021644, AC023054, AC026109, AC090050
S/G/Y/R/B/O NT_009575AC023054954483231RH8068412363.67    1AC090050, AC021562, AC021644, AC023054, AC026109, AC090050
S/G/Y/R/B/O NT_009575AC023054954540951RH32800  123839.00  1AC090050, AC021562, AC021644, AC023054, AC026109, AC090050
S/G/Y/R/B/O NT_009575AC023054954542131RH4468212363.67    1AC090050, AC021562, AC021644, AC023054, AC026109, AC090050
S/G/Y/R/B/O NT_009575AC023054954570241RH9932612358.83    1AC090050, AC021562, AC021644, AC023054, AC026109, AC090050
S/G/Y/R/B/O NT_009575AC090050955645831RH9822412358.22    1 AC021562, AC021644, AC090050
S/G/Y/R/B/O NT_009575AC090050955683141RH6754012363.67    1 AC021562, AC021644, AC090050
S/G/Y/R/B/O NT_009575AC025260955325783RH2685712360.43    1AC023054, AC090050, AC021562, AC021644, AC023054, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC025260955493363RH8077412362.04    3AC023054, AC090050, AC108064, AL109622, AC021644, AC023054, AC025260, AC034128, AC090050, AC108064, AL109622
S/G/Y/R/B/O NT_009575AC025260955506973RH5302112358.22    1AC023054, AC090050, AC021562, AC023054, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC025260955506973WI-19812    12460.301AC023054, AC090050, AC021562, AC023054, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC025260955507243RH7666812364.19    1AC090050, AC021562, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC025260955507903RH5269612363.71  12465.001AC023054, AC090050, AC021562, AC021644, AC023054, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC025260955565603RH5281212363.67  12464.601AC023054, AC090050, AC021562, AC021644, AC023054, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC025260955565613RH5274312363.67  12464.901AC023054, AC090050, AC021562, AC021644, AC023054, AC025260, AC090050
S/G/Y/R/B/O NT_009575AC012085956152463RH9866012363.71    1AC023054, AC012085, AC023054, AC026109
S/G/Y/R/B/O NT_009575AC012085956254933RH8094712357.50    1AC023054, AC012085, AC023054, AC026109
S/G/Y/R/B/O NT_009575AC012085956261283RH9919112363.67    1AC023054, AC012085, AC023054, AC026109
S/G/Y/R/B/O NT_009575AC012085956326473RH5264412363.67  12461.201AC023054, AC012085, AC023054, AC026109
S/G/Y/R/B/O NT_009575AC012085956429293WI-5940    12461.501AC023054, AC012085, AC023054, AC026109
S/G/Y/R/B/O NT_009575AC012085957579153RH10193012363.67    1 AC012085
S/G/Y/R/B/O NT_009575AC012085957641753RH4787712363.67    1 AC012085
S/G/Y/R/B/O NT_009575AC012085957778533RH37912  123839.00  1AC025261, AC012085, AC025261
S/G/Y/R/B/O NT_009575AC025261958099023RH4626512363.67    1AC090504, AC023589, AC025261, AC090504
S/G/Y/R/B/O NT_009575AC090504958999231RH6812712363.67    1AC012464, AC012464, AC023589, AC090504
S/G/Y/R/B/O NT_009575AC090504959000701RH4422012363.67    1AC012464, AC012464, AC023589, AC090504
S/G/Y/R/B/O NT_009575AC090504959001011RH5250612363.71  12464.701AC012464, AC012464, AC023589, AC090504
S/G/Y/R/B/O NT_009575AC090504959063921RH5280312363.71123844.0012464.601 AC023589, AC090504
S/G/Y/R/B/O NT_009575AC012464959470522RH4887812363.67    1AC090504, AC012464, AC023589, AC090504
S/G/Y/R/B/O NT_009575AC012464959971582RH4781112363.67    1AC011844, AC016800, AC093026, AC011844, AC012464, AC016800, AC093026
S/G/Y/R/B/O NT_009575AC011844960581551          
S/G/Y/R/B/O NT_009575AC093026960623161          
S/G/Y/R/B/O NT_009575AC016800961055361          
S/G/Y/R/B/O NT_009575AC021340962557041RH4572112363.67    1AC023339, AC023339, AC021340, AC023339, AC023339
S/G/Y/R/B/O NT_009575AC021340962848581RH4610312363.67    1AC023339, AC021340, AC023339
S/G/Y/R/B/O NT_009575AC023339962285161          
S/G/Y/R/B/O NT_009575AC073655963544953RH3981312364.98    1AC023339, AC023339, AC073655
S/G/Y/R/B/O NT_009575AC073655963638143RH9196612364.98    1AC023339, AC023339, AC073655


  NT_009575 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009575AC073655963803383RH14226  123863.00  1AC023339, AC023339, AC073655
S/G/Y/R/B/O NT_009575AC073655964039383RH6893212364.92    1 AC073655
S/G/Y/R/B/O NT_009575AC073655964054503RH5299912363.67  12464.301 AC073655
S/G/Y/R/B/O NT_009575AC073655964054793RH5287512363.98  12464.301 AC073655
S/G/Y/R/B/O NT_009575AC073655964064523RH10289312364.87    1 AC073655
S/G/Y/R/B/O NT_009575AC073655964206503RH4857412363.67    1 AC073655
S/G/Y/R/B/O NT_009575AC073655964746383RH4907312360.33123872.00  1 AC073655
S/G/Y/R/B/O NT_009575AC073655964991213RH4892012364.98    1 AC073655
S/G/Y/R/B/O NT_009575AC068779965432033AFMB311WC5    12462.901 AC068779
S/G/Y/R/B/O NT_009575AC068779965599603RH4634812364.98    1 AC068779
S/G/Y/R/B/O NT_009575 - RH10217712367.07    1AC009781, AC011598, AC009781, AC011598
S/G/Y/R/B/O NT_009575 - RH1722  123868.00  1AC027473, AC073620, AC090681, AC027473, AC073620, AC090681, AC097104
S/G/Y/R/B/O NT_009575 - SGC31600    12467.400AC018475, AC018475
S/G/Y/R/B/O NT_009575 - RH1065412367.07    1AC023161, AC026672, AC023161, AC026672
S/G/Y/R/B/O NT_009575 - UTR-9625    12467.400AC012115, AC012115
S/G/Y/R/B/O NT_009575 - RH1707512367.07    1AC023161, AC026672, AC023161, AC026672
S/G/Y/R/B/O NT_009575 - RH3668412364.03    1AC023161, AC026672, AC023161, AC026672
S/G/Y/R/B/O NT_009575 - RH4447212363.87    0  
S/G/Y/R/B/O NT_009575 - RH4453712360.33    0  
S/G/Y/R/B/O NT_009575 - RH5259112365.86123895.00  1AC009781, AC011598, AC009781, AC011598
S/G/Y/R/B/O NT_009575 - RH5281512364.66    1AC011598, AC011598
S/G/Y/R/B/O NT_009575 - RH8641  123900.00  1AC009781, AC011598, AC009781, AC011598
S/G/Y/R/B/O NT_009575 - RH5293012362.66    1AC023161, AC026672, AC023161, AC026672
S/G/Y/R/B/O NT_009575 - RH6724312367.07    1AC023161, AC026672, AC023161, AC026672
S/G/Y/R/B/O NT_009575 - RH7664812357.60    2AC018475, AL356573, AC018475, AL356573
S/G/Y/R/B/O NT_009575 - RH9393612363.60    1AC011598, AC011598