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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006198
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006198AC0847241753247991          
S/G/Y/R/B/O NT_006198AC1068781755599273RH804434668.08    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755698453TIGR-A003M16    4729.901 AC106878
S/G/Y/R/B/O NT_006198AC1068781755698453RH593424671.27    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755712633RH911554668.52    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755712893TIGR-A004V40    4731.501 AC106878
S/G/Y/R/B/O NT_006198AC1068781755712893RH591884668.01    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755712993RH99234668.93    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755717083SGC31635    4728.501 AC106878
S/G/Y/R/B/O NT_006198AC1068781755717083RH590694671.14    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755722953RH175284671.14    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755728733RH413984665.38    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755732143RH8346  49036.00  1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755741413RH262964668.01    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755746393RH590984671.76  4733.201 AC106878
S/G/Y/R/B/O NT_006198AC1068781755746393RH37686  49036.00  1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755746393RH98834671.76    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755747553RH106984668.47    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781755753003RH457584671.14    1 AC106878
S/G/Y/R/B/O NT_006198AC1068781756430893RH690301253.16    2AC021586, AC104459, AC021586, AC104459
S/G/Y/R/B/O NT_006198AC0797681756448633          
S/G/Y/R/B/O NT_006198AC0848661758367443CHLC.GATA64D04    4730.001 AC084866
S/G/Y/R/B/O NT_006198AC0848661758383393RH14430  49045.004730.001 AC084866
S/G/Y/R/B/O NT_006198AC0848661758383393RH592934671.27    1 AC084866
S/G/Y/R/B/O NT_006198AC0848661758422883RH920024668.47    1 AC084866
S/G/Y/R/B/O NT_006198AC0848661758427873RH922354671.14    1 AC084866
S/G/Y/R/B/O NT_006198AC0848661758495163RH592764668.5249053.004730.001 AC084866
S/G/Y/R/B/O NT_006198AC0848661758495333RH672214671.14    1 AC084866
S/G/Y/R/B/O NT_006198AC0848661759414603RH983864668.08    1AC022631, AC022631, AC084866
S/G/Y/R/B/O NT_006198AC0226311759718241          
S/G/Y/R/B/O NT_006198AC0693061759817963          
S/G/Y/R/B/O NT_006198AC0689451761431703RH919784668.01    1 AC068945
S/G/Y/R/B/O NT_006198AC0689451761535473RH452934668.08    1 AC068945
S/G/Y/R/B/O NT_006198AC0742551762486253          
S/G/Y/R/B/O NT_006198AC0965711763825513          
S/G/Y/R/B/O NT_006198AC0967141764741893          
S/G/Y/R/B/O NT_006198AC0693021766351503RH28945  49080.00  1 AC069302
S/G/Y/R/B/O NT_006198AC0974861766649043          
S/G/Y/R/B/O NT_006198AC0341591768211753          
S/G/Y/R/B/O NT_006198AC0926391770217303          
S/G/Y/R/B/O NT_006198AC1080741770852593          
S/G/Y/R/B/O NT_006198AC0274111772118941          
S/G/Y/R/B/O NT_006198AC0259661772133871          
S/G/Y/R/B/O NT_006198AC0931631772454033D4S1545    4733.201 AC109457
S/G/Y/R/B/O NT_006198AC0931631772454153RH28974  49110.00  1AC025966, AC025966, AC093163, AC109457
S/G/Y/R/B/O NT_006198AC0742541773218823          
S/G/Y/R/B/O NT_006198AC0937641774909553          
S/G/Y/R/B/O NT_006198AC0255611776759243RH591824669.74  4729.901 AC025561
S/G/Y/R/B/O NT_006198AC0974961777190183RH271354669.74    1 AC097496, AC104797
S/G/Y/R/B/O NT_006198AC0974961777208573RH33697  49226.00  1 AC097496, AC104797


  NT_006198 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006198AC0950631778388803WI-1803    4727.001 AC095063, AC104797
S/G/Y/R/B/O NT_006198AC0247061780056301RH420604669.74  4731.601 AC024706
S/G/Y/R/B/O NT_006198AC0247061780056441RH914  49231.00  1 AC024706
S/G/Y/R/B/O NT_006198AC1100811781162413          
S/G/Y/R/B/O NT_006198AC1080641782435493RH8077412362.04    3AC023054, AC025260, AC090050, AL109622, AC021644, AC023054, AC025260, AC034128, AC090050, AC108064, AL109622
S/G/Y/R/B/O NT_006198AC0258211782616993          
S/G/Y/R/B/O NT_006198 - RH30887  49145.00  0  
S/G/Y/R/B/O NT_006198 - RH8352  49053.00  1AC005837, AC027694, AC005837, AC027694, X75755