Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_022740

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_022740	AC008445	162095999	2
S/G/Y/R/B/O	NT_022740	AC107397	162106217	3
S/G/Y/R/B/O	NT_022740	AC079617	162218362	3	AFM349XC1					4	711.50	1		AC079617
S/G/Y/R/B/O	NT_022740	AC010404	162311277	3
S/G/Y/R/B/O	NT_022740	AC079891	162451971	3
S/G/Y/R/B/O	NT_022740	AC115539	162494983	1
S/G/Y/R/B/O	NT_022740	AC019341	162631994	3	CHLC.GATA29G06					4	698.20	1		AC019341
S/G/Y/R/B/O	NT_022740	AC108017	162703105	3
S/G/Y/R/B/O	NT_022740	AC107219	162768272	3	RH47918	4	646.49					1		AC107219
S/G/Y/R/B/O	NT_022740	AC107219	162782077	3	RH93633	4	645.26					1		AC107219
S/G/Y/R/B/O	NT_022740	AC107219	162782942	3	RH41421	4	644.68					1		AC107219
S/G/Y/R/B/O	NT_022740	AC107219	162783035	3	RH59245	4	646.44					1		AC107219
S/G/Y/R/B/O	NT_022740	AC107219	162783035	3	RH32961			4	8657.00	4	711.50	1		AC107219
S/G/Y/R/B/O	NT_022740	AC107219	162823515	3	RH59217	4	644.78			4	698.20	1		AC107219, D63861
S/G/Y/R/B/O	NT_022740	AC107219	162823682	3	RH2103			4	8662.00			1		AC107219, D63861
S/G/Y/R/B/O	NT_022740	AC107219	162824388	3	RH78904	4	644.78					1		AC107219, D63861
S/G/Y/R/B/O	NT_022740	AC107219	162824806	3	RH41318	4	644.68					1		AC107219, D63861
S/G/Y/R/B/O	NT_022740	AC107219	162825429	3	RH41433	4	646.49					1		AC107219, D63861
S/G/Y/R/B/O	NT_022740	AC109823	162989166	3	RH59353	4	646.49			4	699.50	1		AC015874, AC022175, AC109823
S/G/Y/R/B/O	NT_022740	AC109823	162989342	3	RH10201	4	644.68					1		AC015874, AC022175, AC109823
S/G/Y/R/B/O	NT_022740	AC109823	162989342	3	RH8578			4	8675.00			1		AC015874, AC022175, AC109823
S/G/Y/R/B/O	NT_022740	AC093700	163021480	3	RH79976	4	646.49					1	AC013304,	AC009883, AC011269, AC013304, AC015874, AC022175, AC093700
S/G/Y/R/B/O	NT_022740	AC093700	163022450	3	RH45922	4	646.49					1	AC013304,	AC009883, AC011269, AC013304, AC022175, AC093700
S/G/Y/R/B/O	NT_022740	AC093700	163117857	3	AFMC027ZB9					4	701.00	1	AC013304,	AC009883, AC011269, AC013304, AC093700
S/G/Y/R/B/O	NT_022740	AC093700	163131782	3	RH69794	4	644.78					1	AC013304,	AC009883, AC011269, AC013304, AC093700
S/G/Y/R/B/O	NT_022740	AC095064	163221156	3	RH17958	4	646.19					1		AC095064
S/G/Y/R/B/O	NT_022740	AC095064	163221242	3	RH59250	4	647.17					1		AC095064
S/G/Y/R/B/O	NT_022740	AC095064	163221242	3	SGC33614					4	709.90	1		AC095064
S/G/Y/R/B/O	NT_022740	AC095064	163221360	3	RH25897	4	647.11					1		AC095064
S/G/Y/R/B/O	NT_022740	AC095064	163252492	3	RH91545	4	647.11					1		AC095064
S/G/Y/R/B/O	NT_022740	AC110805	163420336	1	RH93702	4	646.44					1	AC105316,	AC105316, AC110805
S/G/Y/R/B/O	NT_022740	AC110805	163422023	1	RH41287	4	647.11					1	AC105316,	AC105316, AC110805
S/G/Y/R/B/O	NT_022740	AC105316	163384378	1	RH41416	4	646.59					1	AC110805,	AC105316, AC110805
S/G/Y/R/B/O	NT_022740	AC105316	163384727	1	RH45436	4	647.11					1	AC110805,	AC105316, AC110805
S/G/Y/R/B/O	NT_022740	AC105316	163384744	1	RH18429	4	646.19					1	AC110805,	AC105316, AC110805
S/G/Y/R/B/O	NT_022740	AC013304	163400812	1
S/G/Y/R/B/O	NT_022740	AC074344	163479551	3	RH59265	4	647.17					1		AC074344
S/G/Y/R/B/O	NT_022740	AC074344	163479551	3	WI-20985					4	709.90	1		AC074344
S/G/Y/R/B/O	NT_022740	AC074344	163479755	3	RH25949	4	647.11					1		AC074344
S/G/Y/R/B/O	NT_022740	AC074344	163508051	3	SGC33161					4	703.80	1		AC074344, AC079451
S/G/Y/R/B/O	NT_022740	AC105423	163583660	3
S/G/Y/R/B/O	NT_022740	AC097466	163770701	3	WI-10831					4	711.50	1		AC097466
S/G/Y/R/B/O	NT_022740	AC021101	163850741	3
S/G/Y/R/B/O	NT_022740	AC079748	163895810	3
S/G/Y/R/B/O	NT_022740		-		SGC30802					4	696.70	1	AC079233,	AC079233, AC112240
S/G/Y/R/B/O	NT_022740		-		CHLC.GATA62E07					4	698.20	1	AC114914,	AC114914
S/G/Y/R/B/O	NT_022740		-		WI-3731					4	698.20	1	AC079233,	AC079233
S/G/Y/R/B/O	NT_022740		-		CHLC.GATA8A05.417					4	699.50	1	AC114914,	AC114914