Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_033060

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_033060	AC114805	7540995	1	RH102704	4	42.74					1	AC093323,	AC004480, AC093323, AC114805
S/G/Y/R/B/O	NT_033060	AC114815	7311401	1	CHLC.GATA22G05					4	37.80	1		AC114815
S/G/Y/R/B/O	NT_033060	AC114815	7358006	1	RH38631			4	452.00			1		AC004599, AC114815
S/G/Y/R/B/O	NT_033060	AC114815	7429347	1	RH30856			4	459.00			1	AC093323, AC114805,	AC004480, AC093323, AC114805, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7486277	1	WI-12238					4	36.70	1	AC114805, AC114815,	AC004480, AC093323, AC114805, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7486277	1	RH59379	4	45.04	4	466.00			1	AC114805, AC114815,	AC004480, AC093323, AC114805, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7489596	1	RH78489	4	45.04					1	AC114805,	AC004479, AC004480, AC093323, AC114805
S/G/Y/R/B/O	NT_033060	AC093323	7491427	1	RH11602	4	42.74					1	AC114805, AC114815,	AC004480, AC093323, AC114805, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7491486	1	TIGR-A003P39					4	38.20	1	AC114805,	AC004480, AC093323, AC114805
S/G/Y/R/B/O	NT_033060	AC093323	7491486	1	RH59521	4	42.74					1	AC114805,	AC004480, AC093323, AC114805
S/G/Y/R/B/O	NT_033060	AC093323	7492319	1	RH16996	4	42.84					1	AC114805, AC114815,	AC004480, AC093323, AC114805, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7492361	1	WI-20841					4	38.20	1	AC114815,	AC004480, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7492361	1	RH59621	4	42.74					1	AC114815,	AC004480, AC114815
S/G/Y/R/B/O	NT_033060	AC093323	7510851	1	WI-14604					4	38.00	1	AC114805,	AC004479, AC004480, AC093323, AC114805, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7510851	1	RH59493	4	42.84					1	AC114805,	AC004479, AC004480, AC093323, AC114805, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7510961	1	RH78266	4	44.74					1	AC114805,	AC004479, AC004480, AC093323, AC114805, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7512246	1	RH66868	4	42.84					1		AC004480, AC093323, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7512604	1	SGC34333					4	38.00	1	AC114805,	AC004480, AC093323, AC114805, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7512604	1	RH59468	4	42.84					1	AC114805,	AC004480, AC093323, AC114805, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7512642	1	RH11515	4	42.74					1	AC114805,	AC004480, AC093323, AC114805, AF116272
S/G/Y/R/B/O	NT_033060	AC093323	7545763	1	RH15999	4	42.84					1		AC004480, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7546023	1	NIB1869					4	37.50	1		AC004480, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7546023	1	RH59303	4	44.47					1		AC004480, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7577861	1	RH38462			4	466.00			1		AC004480, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7577973	1	RH18354	4	42.84					1		AC004480, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7578409	1	RH80417	4	45.04					1		AC004480, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7587259	1	RH32555			4	502.00	4	36.70	1		AC004480, AC004604, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7587259	1	RH59260	4	45.04					1		AC004480, AC004604, AC093323
S/G/Y/R/B/O	NT_033060	AC093323	7587596	1	RH66005	4	45.04					1		AC004480, AC004604, AC093323
S/G/Y/R/B/O	NT_033060		-		RH65582	4	50.94					0
S/G/Y/R/B/O	NT_033060		-		RH78163	4	51.82					0