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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022760
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022760AC111196772505681SGC32423    4490.101AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772508651RH591954436.2244305.004488.801AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772534781RH591664435.8144295.004488.801AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772549101RH99624437.56    1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772555721RH122584437.56    1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772563101RH1743  44295.00  1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772563161WI-20168    4491.501AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772563161RH590914444.38    1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772578661RH938764437.76    1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772652541RH592964436.2244300.004488.701AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772662511RH118434443.86    1AP002874, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772670861RH413814437.81    1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC111196772672271RH459114443.86    1AC079051, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC104687771604321RH591564437.8744290.004489.801AC079051, AC111196, AP002874, AC079051, AC104687, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC104687771729071RH657894444.48    1AC079051, AC111196, AP002874, AC079051, AC104687, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC104687772041291RH42915  44295.00  1AC079051, AC111196, AP002874, AC079051, AC104687, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC104687772043911RH463034443.86    1AC079051, AC111196, AP002874, AC079051, AC104687, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC104687772046391RH364094435.71    1AC079051, AC111196, AP002874, AC079051, AC104687, AC111196, AP002874
S/G/Y/R/B/O NT_022760AC079051771168021          
S/G/Y/R/B/O NT_022760AP002874773020411          
S/G/Y/R/B/O NT_022760AC104771773849023RH260504443.86    1 AC022548, AC104771
S/G/Y/R/B/O NT_022760AC104771773850253RH250434443.86    1 AC022548, AC104771
S/G/Y/R/B/O NT_022760AC104771773851243RH103684437.56    1 AC022548, AC104771
S/G/Y/R/B/O NT_022760AC104771773878623RH109504437.14    1AC112716, AC022548, AC104771, AC112716
S/G/Y/R/B/O NT_022760AC104771773878683RH119154443.86    1AC112716, AC022548, AC104771, AC112716
S/G/Y/R/B/O NT_022760AC104771774003003RH1039144443.86    1AC112716, AC022548, AC104771, AC112716
S/G/Y/R/B/O NT_022760AC112716774207801          
S/G/Y/R/B/O NT_022760AC008638775605953          
S/G/Y/R/B/O NT_022760AC108144775768391          
S/G/Y/R/B/O NT_022760AC092674775877691          
S/G/Y/R/B/O NT_022760AC093758778293083RH13815  44357.00  1 AC093758
S/G/Y/R/B/O NT_022760AC093758778294193RH255284437.50    1 AC093758
S/G/Y/R/B/O NT_022760AC104701779317463RH33729  44361.00  1AC068997, AC068997, AC104701
S/G/Y/R/B/O NT_022760AC104701779319603RH260884449.65    1AC068997, AC026627, AC068997, AC104701
S/G/Y/R/B/O NT_022760AC112225780522241          
S/G/Y/R/B/O NT_022760AC068997780582811          
S/G/Y/R/B/O NT_022760AC015679780831901          
S/G/Y/R/B/O NT_022760AC026931781728631RH182704439.00    1 AC026931, AC114782
S/G/Y/R/B/O NT_022760AC026931781729701RH590734443.15  4491.601 AC026931, AC114782
S/G/Y/R/B/O NT_022760AC107072782323483RH655744436.22    1 AC025141, AC107072, AP002876
S/G/Y/R/B/O NT_022760AC107072782506253RH595234436.69  4491.501 AC025141, AC107072, AP002876
S/G/Y/R/B/O NT_022760AC107072782537323RH38367  44290.004489.201 AC025141, AC107072, AP002876
S/G/Y/R/B/O NT_022760AC107072782537323RH594074450.01    1 AC025141, AC107072, AP002876
S/G/Y/R/B/O NT_022760AC107072783073483RH592214425.75    1 AC025141, AC107072
S/G/Y/R/B/O NT_022760AC107072783073483SGC34670    4503.401 AC025141, AC107072
S/G/Y/R/B/O NT_022760AC107051783344573          
S/G/Y/R/B/O NT_022760AP002859783914821          
S/G/Y/R/B/O NT_022760AC112249785273191CHLC.ATA25H11    4488.801AP002859, AC112249, AP002859
S/G/Y/R/B/O NT_022760AP002822784628541          
S/G/Y/R/B/O NT_022760AC079797784771441          


  NT_022760 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022760AC093652785963653CHLC.GATA91G04    4490.401AC026931, AP002822, AC026931, AC093652, AC114782, AP002822
S/G/Y/R/B/O NT_022760AC093897786341023RH1036704439.00    1AP002822, AC093897, AC114782, AP002822
S/G/Y/R/B/O NT_022760AC093897786982473RH707954439.00    1 AC093897, AC114782
S/G/Y/R/B/O NT_022760AC093897787241883RH650373162.26    3AC096887, AC103589, AL353587, AC093897, AC096887, AC103589, AC114782, AL353587, AL583837
S/G/Y/R/B/O NT_022760AC093897787307923CHLC.GATA71D08    4507.001 AC093897, AC114782
S/G/Y/R/B/O NT_022760AL160235787743092          
S/G/Y/R/B/O NT_022760AC019264787832461          
S/G/Y/R/B/O NT_022760AC093886788192133          
S/G/Y/R/B/O NT_022760AC104808790720661RH158754439.00    1AC112253, AC025806, AC104808, AC112253
S/G/Y/R/B/O NT_022760AC104808790721161RH595994443.7644381.004492.201AC112253, AC025806, AC104808, AC112253
S/G/Y/R/B/O NT_022760AC104808790940701RH109904439.00    1AC112253, AC025806, AC104808, AC112253
S/G/Y/R/B/O NT_022760AC104808791294591RH110554438.18    1AC112253, AC025806, AC104808, AC112253
S/G/Y/R/B/O NT_022760AC104808791322361RH110564443.15    1AC112253, AC025806, AC104808, AC112253
S/G/Y/R/B/O NT_022760AC104808791381471RH800244443.97    1AC112253, AC112253
S/G/Y/R/B/O NT_022760AC112253791540061          
S/G/Y/R/B/O NT_022760AC096743792277823          
S/G/Y/R/B/O NT_022760AC034139794047473RH596254433.89  4488.701AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_022760AC034139794056023RH1026224450.06    1AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_022760AC034139794077303RH98274436.22    1AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_022760AC034139794081663WI-17734    4491.501AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_022760AC034139794081663RH594344450.06    1AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_022760AC034139794352013RH991674436.22    1AC015499, AC110795, AC015499, AC034139, AC110795
S/G/Y/R/B/O NT_022760AC110795795059581          
S/G/Y/R/B/O NT_022760AC110802795493251RH427344433.89    1AC015499, AC015499, AP002875
S/G/Y/R/B/O NT_022760AC110802795571331WI-9200    4489.501AC015499, AC110795, AC015499, AC110795, AC110802, AP002875
S/G/Y/R/B/O NT_022760AC110802795571331RH589644450.01    1AC015499, AC110795, AC015499, AC110795, AC110802, AP002875
S/G/Y/R/B/O NT_022760AC110802795572491SGC30403    4491.501AC110795, AC110795, AP002875
S/G/Y/R/B/O NT_022760AC110802795572491RH590584450.06    1AC110795, AC110795, AP002875
S/G/Y/R/B/O NT_022760AC110802795574421RH412684433.89    1AC015499, AC110795, AC015499, AC110795, AP002875
S/G/Y/R/B/O NT_022760AC110802795597201RH8661  44263.00  1AC015499, AC110795, AC015499, AC110795, AC110802, AP002875
S/G/Y/R/B/O NT_022760AC110802795598551RH263584436.22    1AC015499, AC110795, AC015499, AC110795, AC110802, AP002875
S/G/Y/R/B/O NT_022760AC110802795599011RH591104437.56  4489.801AC015499, AC110795, AC015499, AC110795, AC110802, AP002875
S/G/Y/R/B/O NT_022760AC110802796468981RH1038694436.73    1AC112719, AC110802, AC112719, AP002875
S/G/Y/R/B/O NT_022760AC110802796514621RH414014435.50    1AC112719, AC110802, AC112719, AP002875
S/G/Y/R/B/O NT_022760AC110802796515231RH937664435.50    1AC112719, AC110802, AC112719, AP002875
S/G/Y/R/B/O NT_022760AC110802796540111RH256514436.11    1AC112719, AC110802, AC112719, AP002875
S/G/Y/R/B/O NT_022760AC110802796631211WI-5714    4503.301AC112719, AC110802, AC112719, AP002875
S/G/Y/R/B/O NT_022760AC110802797433471RH28710  44263.00  1AC112719, AC110802, AC112719
S/G/Y/R/B/O NT_022760AC015499795979481          
S/G/Y/R/B/O NT_022760AC112719797451211RH414344433.89    1 AC112719
S/G/Y/R/B/O NT_022760AC112719797631891RH14163  44258.00  1AC115628, AC112719, AC115628
S/G/Y/R/B/O NT_022760AC112719797648251RH414404436.59    1AC115628, AC112719, AC115628
S/G/Y/R/B/O NT_022760AC115628797862271RH30871  44263.00  1AC112719, AC112719
S/G/Y/R/B/O NT_022760AC115628797969751RH268534450.06    1 AC115628
S/G/Y/R/B/O NT_022760AC110615798181321RH986634436.22    1AC115628, AC110615, AC115628
S/G/Y/R/B/O NT_022760AC110615798555541RH594514450.27  4503.901AC115628, AC110615, AC115628
S/G/Y/R/B/O NT_022760AC110615798557251WI-11412    4491.601AC115628, AC110615, AC115628
S/G/Y/R/B/O NT_022760AC110615798557251RH595284449.96    1AC115628, AC110615, AC115628
S/G/Y/R/B/O NT_022760AC110615798572901RH990424449.96    1AC115628, AC110615, AC115628, AP002858
S/G/Y/R/B/O NT_022760AC110615799068231RH476514450.01    1 AC110615, AP002858


  NT_022760 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022760AC110615799570751RH468914450.01    1AC053517, AC053517, AC110615, AP002858
S/G/Y/R/B/O NT_022760AC110615799571001RH33785  44182.00  2AC053517, AC034197, AC053517, AC110615, AP002858
S/G/Y/R/B/O NT_022760AC110615799571741RH104844425.68    2AC053517, AC053517, AC110615, AP002858
S/G/Y/R/B/O NT_022760AC053517799681991          
S/G/Y/R/B/O NT_022760AC104828801545971RH119034450.06    1AC016124, AC055774, AC016124, AC055774, AC104828
S/G/Y/R/B/O NT_022760AC104828801549621RH590994437.25  4485.101 AC104828
S/G/Y/R/B/O NT_022760AC055774801059741          
S/G/Y/R/B/O NT_022760AC108939802057693          
S/G/Y/R/B/O NT_022760AC096759802198543RH592284437.45  4485.101 AC096759
S/G/Y/R/B/O NT_022760AC096759802666083RH594294430.54  4485.601 AC096759
S/G/Y/R/B/O NT_022760AC096759802668163RH988294437.25    1 AC096759
S/G/Y/R/B/O NT_022760AC096759803142973RH913274450.06    1 AC096759
S/G/Y/R/B/O NT_022760AC025244804021263          
S/G/Y/R/B/O NT_022760AC093870806182373RH486254450.06    1 AC093870
S/G/Y/R/B/O NT_022760AC110760807144613RH1039784450.16    1 AC110760
S/G/Y/R/B/O NT_022760AC110760807465523RH170434431.46    1 AC110760
S/G/Y/R/B/O NT_022760AC110760807465833RH33782  44182.00  1 AC110760
S/G/Y/R/B/O NT_022760AC110760807479703RH168664431.46    1 AC110760
S/G/Y/R/B/O NT_022760AC110760807491873RH592954437.45  4485.001 AC110760
S/G/Y/R/B/O NT_022760AC110760807718893CM4.1453    4485.601 AC110760
S/G/Y/R/B/O NT_022760AC110760808024533RH993284428.12    1 AC110760
S/G/Y/R/B/O NT_022760AC098825809150513RH986204449.85    1 AC098825
S/G/Y/R/B/O NT_022760AC098825809298603RH332  43226.00  1 AC098825
S/G/Y/R/B/O NT_022760AC016124810167921          
S/G/Y/R/B/O NT_022760AC098818810870433AFMA282XG5    4493.101 AC098818
S/G/Y/R/B/O NT_022760AC098818811712823RH592984443.25  4486.801 AC009685, AC098818
S/G/Y/R/B/O NT_022760AC098818811744333RH427074440.8244395.00  1 AC009685, AC098818
S/G/Y/R/B/O NT_022760AC098818812764163RH453404443.15    1 AC009685, AC098818
S/G/Y/R/B/O NT_022760AC093841813001293RH413294437.87    1 AC009685, AC093841
S/G/Y/R/B/O NT_022760AC093841813009713RH470324443.92    1 AC009685, AC093841
S/G/Y/R/B/O NT_022760AC093841813011203RH362194440.72    1 AC009685
S/G/Y/R/B/O NT_022760AC093841813062883RH591314443.2544399.004491.801 AC093841
S/G/Y/R/B/O NT_022760AC093841813070193RH488514440.82    1 AC093841
S/G/Y/R/B/O NT_022760AC093841814352053RH38270  44397.00  1AC114796, AC093841, AC114796
S/G/Y/R/B/O NT_022760AC114796814596751          
S/G/Y/R/B/O NT_022760AC108466815971653          
S/G/Y/R/B/O NT_022760AC023277816614553RH481744440.82    1AC108466, AC023277, AC080031, AC108466
S/G/Y/R/B/O NT_022760AC023277816964953RH413764440.82    1 AC023277, AC080031
S/G/Y/R/B/O NT_022760AC023277817944053RH592234440.8244417.004491.701AC079345, AC023277, AC079345
S/G/Y/R/B/O NT_022760AC079345817950083          
S/G/Y/R/B/O NT_022760AC092542819643331          
S/G/Y/R/B/O NT_022760 - RH109784437.56    1 U20758
S/G/Y/R/B/O NT_022760 - RH911054436.73    0  
S/G/Y/R/B/O NT_022760 - RH33653  44221.004484.700  
S/G/Y/R/B/O NT_022760 - RH37755  44293.00  0AL158158, AL158158
S/G/Y/R/B/O NT_022760 - WI-6559    4491.101AC084732, AC087106, AC084732, AC087106
S/G/Y/R/B/O NT_022760 - SGC32653    4492.200AC104808, AC025806, AC104808