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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022851
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022851AC1070741577061341CHLC.GATA69C04    4684.401 AC107074
S/G/Y/R/B/O NT_022851AC1070741577061341RH60544659.31    1 AC107074
S/G/Y/R/B/O NT_022851AC1070741577172701RH454884633.86    1AC044853, AC044853, AC107074, AC112242
S/G/Y/R/B/O NT_022851AC0448531569806471          
S/G/Y/R/B/O NT_022851AC0926111569950453RH33334  48258.004684.401 AC092611
S/G/Y/R/B/O NT_022851AC0926111569950453RH590244638.91    1 AC092611
S/G/Y/R/B/O NT_022851AC0926111570805953RH263134635.41    1 AC092611
S/G/Y/R/B/O NT_022851AC0926111570808733RH929024635.41    1 AC092611
S/G/Y/R/B/O NT_022851AC0926111570811373RH37964  48237.00  1 AC092611
S/G/Y/R/B/O NT_022851AC0926111570813373RH792004637.41    1 AC092611
S/G/Y/R/B/O NT_022851AC0974551571241693          
S/G/Y/R/B/O NT_022851AC0797951572694963          
S/G/Y/R/B/O NT_022851AC0844201574038341RH1041474635.41    1AC104819, AC026556, AC084420, AC104819
S/G/Y/R/B/O NT_022851AC0950551574506903RH593504635.80  4684.401 AC079794, AC095055, X87373, Z83334
S/G/Y/R/B/O NT_022851AC0950551574668313RH677274637.41    1 AC079794, AC095055
S/G/Y/R/B/O NT_022851AC0950551574677873RH595574635.41  4684.401 AC079794, AC095055
S/G/Y/R/B/O NT_022851AC0950551574677873RH14559  48141.00  1 AC079794, AC095055
S/G/Y/R/B/O NT_022851AC0950551574882163RH413734637.41    1 AC095055
S/G/Y/R/B/O NT_022851AC0950551574882823RH989904637.41    1  
S/G/Y/R/B/O NT_022851AC0950551575314573RH592794637.41  4684.401 AC095055
S/G/Y/R/B/O NT_022851AC0950551575631453RH152064637.41    1AC104819, AC026556, AC095055, AC104819
S/G/Y/R/B/O NT_022851AC0950551575631453RH311  48204.00  1AC104819, AC026556, AC095055, AC104819
S/G/Y/R/B/O NT_022851AC1048191576426991RH592924637.41  4684.401AC084420, AC026556, AC084420, AC104819
S/G/Y/R/B/O NT_022851AC0973751577946103WI-5276    4684.401AC107074, AC097375, AC107074, AC112242
S/G/Y/R/B/O NT_022851AC0973751578770643WI-10758    4684.401AC107074, AC009583, AC023581, AC097375, AC107074
S/G/Y/R/B/O NT_022851AC0973751579641243RH7675119239.30    3AC002492, AC011508, AC023970, AC002492, AC011508, AC023970, AC097375
S/G/Y/R/B/O NT_022851AC0793401579779253          
S/G/Y/R/B/O NT_022851AC0800781581942711RH596284637.4148279.004684.401 AC080078
S/G/Y/R/B/O NT_022851AC0800781582083611RH800074633.23    1 AC080078
S/G/Y/R/B/O NT_022851AC0234241583871343RH33405  48354.00  1 AC023424, AC067826
S/G/Y/R/B/O NT_022851AC0234241583982773RH165934637.41    1 AC023424, AC067826
S/G/Y/R/B/O NT_022851AC0234241583983193RH255114633.79    1 AC023424, AC067826
S/G/Y/R/B/O NT_022851AC0234241584250513RH685494637.41    1 AC023424
S/G/Y/R/B/O NT_022851AC0234241584258013RH590624633.86    1 AC023424
S/G/Y/R/B/O NT_022851AC0234241584258013WI-16316    4684.101 AC023424
S/G/Y/R/B/O NT_022851AC0234241584791073RH452984637.41    1 AC023424
S/G/Y/R/B/O NT_022851AC1068821585133501RH992974637.41    1 AC106882
S/G/Y/R/B/O NT_022851AC1131551585939391          
S/G/Y/R/B/O NT_022851AC0993391587065711RH41722  48350.00  1 AC099339
S/G/Y/R/B/O NT_022851AC0993391587078051RH987834635.90    1 AC099339
S/G/Y/R/B/O NT_022851AC0993391587093191RH802174635.31    1 AC099339
S/G/Y/R/B/O NT_022851AC0935991587384623WI-4417    4684.401AC067780, AC099339, AC067780, AC093599, AC099339
S/G/Y/R/B/O NT_022851AC0935991587615193RH591304635.80  4684.401AC067780, AC099339, AC067780, AC093599, AC099339
S/G/Y/R/B/O NT_022851AC0935991587763893RH594704635.3948357.004684.401AC067780, AC099339, AC067780, AC093599, AC099339
S/G/Y/R/B/O NT_022851AC0935991587772193RH122354637.51    1AC067780, AC099339, AC067780, AC093599, AC099339
S/G/Y/R/B/O NT_022851AC0935991588221563RH128614637.41    1AC067780, AC067780, AC093599
S/G/Y/R/B/O NT_022851AC0677801589097061          
S/G/Y/R/B/O NT_022851 - RH110454635.80    0AC107385, AC110753, AC009583, AC107385, AC110753, AF388026, M64983
S/G/Y/R/B/O NT_022851 - RH111054633.55    1AC093881, AC104691, AC093881, AC104691, M80582
S/G/Y/R/B/O NT_022851 - RH116384632.82    0  


  NT_022851 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022851 - RH122214635.39    0  
S/G/Y/R/B/O NT_022851 - RH157914632.82    0  
S/G/Y/R/B/O NT_022851 - RH162074637.41    0  
S/G/Y/R/B/O NT_022851 - RH183834637.41    1AC093748, AC093748
S/G/Y/R/B/O NT_022851 - RH413004637.41    1AC011122, AC092544, AC104796, AL391543, AC011122, AC018778, AC092544, AC104796, AL391543
S/G/Y/R/B/O NT_022851 - RH413804638.84    1  
S/G/Y/R/B/O NT_022851 - RH454854634.90    1AC026553, AC093648, AC026553, AC069422, AC093648, AC108935
S/G/Y/R/B/O NT_022851 - RH462474632.92    1AC009567, AC009567
S/G/Y/R/B/O NT_022851 - RH473304634.27    0  
S/G/Y/R/B/O NT_022851 - RH593244632.82    1AC107385, AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_022851 - RH595704637.41    1AC009793, AC011122, AC104796, AC009793, AC011122, AC079794, AC104796
S/G/Y/R/B/O NT_022851 - RH596144633.75    1AC107385, AC110753, AC009583, AC107385, AC110753, AF388026, M64983
S/G/Y/R/B/O NT_022851 - RH788914635.39    1 AC011842
S/G/Y/R/B/O NT_022851 - RH988014637.41    0