Home    Genome Browser    BLAT Search    Help
  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022844
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022844AC009993848107071RH592154448.71  4492.902AC012233, AC110420, AC009993, AC012233, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC009993848107071RH38398  48670.00  2AC012233, AC110420, AC009993, AC012233, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC009993848107481RH175754443.76    2AC012233, AC110420, AC009993, AC012233, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848021941RH593184448.54  4493.102AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848022631RH667074444.75    2AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848034411RH270994444.68    2AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848055871RH591224448.92  4493.102AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848098201RH756964457.77    2AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848099761RH936314443.76    2AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC015456848179881RH14718  44450.00  2AC009993, AC012233, AC110420, AC009993, AC012233, AC015456, AC099646, AC110420, AF026126
S/G/Y/R/B/O NT_022844AC015456848244551RH413424444.44    2AC009993, AC110420, AC009993, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC012233846589631          
S/G/Y/R/B/O NT_022844AC110420848270631RH593184448.54  4493.102AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848271321RH667074444.75    2AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848283101RH270994444.68    2AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848304561RH591224448.92  4493.102AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848346891RH756964457.77    2AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848348451RH936314443.76    2AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848355761RH592154448.71  4492.902AC009993, AC012233, AC009993, AC012233, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848355761RH38398  48670.00  2AC009993, AC012233, AC009993, AC012233, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848356171RH175754443.76    2AC009993, AC012233, AC009993, AC012233, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848428571RH14718  44450.00  2AC009993, AC012233, AC015456, AC009993, AC012233, AC015456, AC099646, AC110420, AF026126
S/G/Y/R/B/O NT_022844AC110420848493241RH413424444.44    2AC009993, AC015456, AC009993, AC015456, AC099646, AC110420
S/G/Y/R/B/O NT_022844AC110420848515201RH700034444.48    1AC009993, AC015456, AC009993, AC015456, AC099646, AC110420, AF026126
S/G/Y/R/B/O NT_022844AC110420848558541RH805264448.41    1AC009993, AC015456, AC009993, AC015456, AC099646, AF026126
S/G/Y/R/B/O NT_022844AC110420850676221RH592594443.76  4492.901AC009993, AC015456, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110420850733131RH924174448.54    1AC009993, AC015456, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110420850738431RH591984449.12  4492.201AC009993, AC015456, AB017018, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110420850738431RH38364  44464.00  1AC009993, AC015456, AB017018, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110420850739591RH171594444.48    1AC009993, AC015456, AB017018, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110420850752631RH681974448.41    1AC009993, AC015456, AB017018, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110420850752651RH805684448.71    1AC009993, AC015456, AB017018, AC009993, AC015456, AC110420
S/G/Y/R/B/O NT_022844AC110787850360701WI-5648    2947.902AC018717, AC018717, AC110787
S/G/Y/R/B/O NT_022844AC067942851021363RH109944448.54    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851114473RH129054449.12    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851114953RH592274444.48  4493.101AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851114953RH38350  44455.00  1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851338303RH1026184448.61    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851355833RH680084448.71    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851357883RH1031944448.81    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851454993RH47306964.15    4AC004386, AC044812, AC110420, AL161909, AL391834, AC004386, AC044812, AC067942, AC109451, AC110420, AL161909, AL391834, AL590805, M77232, X67309
S/G/Y/R/B/O NT_022844AC067942851749173RH413724443.76    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942851759703RH163934448.41    1AC110420, AC067942, AC110420
S/G/Y/R/B/O NT_022844AC067942852302273RH5245612444.34  12556.004AC004216, AC004216
S/G/Y/R/B/O NT_022844AC067942852328033RH30873  44553.00  1AC027573, AC027573, AC067942, AC093595
S/G/Y/R/B/O NT_022844AC067942852637813RH591414448.54  4492.901AC027573, AC027573, AC067942, AC093595
S/G/Y/R/B/O NT_022844AC073413852801773RH594724449.12    1AC027573, AC027573, AC073413, AC093595
S/G/Y/R/B/O NT_022844AC073413852801773WI-19688    4503.201AC027573, AC027573, AC073413, AC093595
S/G/Y/R/B/O NT_022844AC073413852802113RH474834448.41    1AC027573, AC027573, AC073413, AC093595
S/G/Y/R/B/O NT_022844AC073413852802323RH105944448.71    1AC027573, AC027573, AC073413, AC093595


  NT_022844 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022844AC073413852811543RH592614443.76  4493.401AC027573, AC027573, AC073413, AC093595
S/G/Y/R/B/O NT_022844AC073413854379813RH590874448.71  4493.401AC108469, AC007714, AC073413, AC108469
S/G/Y/R/B/O NT_022844AC073413854379813RH38385  45258.00  1AC108469, AC007714, AC073413, AC108469
S/G/Y/R/B/O NT_022844AC073413854476153WI-10800    4494.801AC108469, AC073413, AC108469
S/G/Y/R/B/O NT_022844AC108469854693711RH767064448.81    1 AC108469
S/G/Y/R/B/O NT_022844AC108469854696661RH584453406.90  3499.901 AC108469
S/G/Y/R/B/O NT_022844AC108469854780061RH8552  44546.00  1 AC108469
S/G/Y/R/B/O NT_022844AC108469854780161RH983104449.12    1 AC108469
S/G/Y/R/B/O NT_022844AC108469854943311RH595554449.1244553.004494.801 AC108469
S/G/Y/R/B/O NT_022844AC108469855055211RH184864449.12    1 AC108469
S/G/Y/R/B/O NT_022844AC108469855062381RH272124449.65    1 AC108469
S/G/Y/R/B/O NT_022844AC027573855080981          
S/G/Y/R/B/O NT_022844AC021105855228083RH360834448.81    1AC108469, AC021105, AC108469
S/G/Y/R/B/O NT_022844AC021105855467503RH669244443.76    1AC108469, AC021105, AC108469
S/G/Y/R/B/O NT_022844AC021105855719783RH657524449.12    1AC108469, AC021105, AC108469
S/G/Y/R/B/O NT_022844AC021105855726393RH941094449.02    1AC108469, AC021105, AC108469
S/G/Y/R/B/O NT_022844AC108473856792591          
S/G/Y/R/B/O NT_022844AC073840857287333RH268414449.02    1AC108473, AC073840, AC108473
S/G/Y/R/B/O NT_022844AC073840857392663RH412694443.76    1AC108473, AC073840, AC108473
S/G/Y/R/B/O NT_022844AC073840857439053RH591294444.68  4493.601AC108473, AC073840, AC108473
S/G/Y/R/B/O NT_022844AC073840858757103RH596354448.41  4494.801 AC073840, AC114781
S/G/Y/R/B/O NT_022844 - RH119774443.86    0AC079051, AC111196, AP002874, AC079051, AC111196, AP002874
S/G/Y/R/B/O NT_022844 - RH38428  44553.00  1AC096746, AC096746
S/G/Y/R/B/O NT_022844 - RH150184448.41    0 AC114781
S/G/Y/R/B/O NT_022844 - RH163554444.44    0  
S/G/Y/R/B/O NT_022844 - RH181944445.39    0  
S/G/Y/R/B/O NT_022844 - RH260884449.65    1AC068997, AC104701, AC026627, AC068997, AC104701
S/G/Y/R/B/O NT_022844 - RH413654444.68    0 AC114781
S/G/Y/R/B/O NT_022844 - RH593284448.71  4493.401AC021655, AC024108, AC074044, AC021655, AC024108, AC026559, AC074044, AC092911
S/G/Y/R/B/O NT_022844 - RH595154444.58    0AC104808, AC025806, AC104808
S/G/Y/R/B/O NT_022844 - GCT14E02    4494.800 AC114781
S/G/Y/R/B/O NT_022844 - RH661104443.92    0  
S/G/Y/R/B/O NT_022844 - WI-9781    4494.800 AC114781
S/G/Y/R/B/O NT_022844 - RH778744444.58    1AC095056, AC106051, AC095056, AC106051
S/G/Y/R/B/O NT_022844 - RH912014448.54    0  
S/G/Y/R/B/O NT_022844 - RH924064444.75    1AC021192, AC021192, AC069056
S/G/Y/R/B/O NT_022844 - RH943134449.02    0 AC114781
S/G/Y/R/B/O NT_022844 - RH986204449.85    1AC098825, AC098825