Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_006350

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_006350	AC105916	18503065	1	RH77884	21	164.65					2		AL163259, AP000032, AP000103, AP000179, AP001714
S/G/Y/R/B/O	NT_006350	AC105916	18503201	1	RH67211	4	25.88					1	AC098976,	AC098976, AC105916
S/G/Y/R/B/O	NT_006350	AC098976	18538312	3	RH59373	4	61.16			4	78.30	3		AC098976
S/G/Y/R/B/O	NT_006350	AC098976	18540133	3	RH64970	4	61.22					2	AC005629, AC006453, AC116050, AL663102,	AC005629, AC006453, AC027487, AC098976, AC116050, AL663102
S/G/Y/R/B/O	NT_006350	AC098976	18572967	3	RH46286	4	61.27					1	AC067775,	AC067775, AC098976
S/G/Y/R/B/O	NT_006350	AC098976	18589921	3	RH59589	4	61.16	4	711.00	4	78.30	1	AC067775,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006350	AC098976	18590061	3	RH16225	4	61.85					1	AC067775,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006350	AC098976	18590261	3	WI-5551					4	78.30	1	AC067775,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006350	AC098976	18590623	3	RH70344	4	62.06					1	AC067775,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006350	AC098976	18646152	3	RH59312	4	61.22			4	78.30	1	AC067775,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006350	AC098976	18646204	3	RH27078	4	61.22					1	AC067775,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006350	AC067775	18652448	1
S/G/Y/R/B/O	NT_006350	AC005674	18749750	3	RH36271	4	61.85					1		AC005674, AC092541
S/G/Y/R/B/O	NT_006350	AC005674	18835396	3	RH102486	4	61.16					1	AC009528,	AC005674, AC009528
S/G/Y/R/B/O	NT_006350	AC005674	18841628	3	RH11683	4	61.22					1	AC009528,	AC005674, AC009528
S/G/Y/R/B/O	NT_006350	AC093664	18864887	3	RH66742	4	61.22					1	AC009528,	AC009528, AC093664
S/G/Y/R/B/O	NT_006350	AC093664	18868016	3	RH36867	4	60.90					1	AC009528,	AC009528, AC093664
S/G/Y/R/B/O	NT_006350	AC093664	18879251	3	RH59339	4	61.16	4	738.00	4	78.30	1	AC009528,	AC009528, AC093664
S/G/Y/R/B/O	NT_006350	AC006499	18971299	3	WI-945					4	78.30	1	AC009528,	AC006499, AC009528
S/G/Y/R/B/O	NT_006350	AC006499	19083284	3	WI-9872					4	78.30	1		AC006499
S/G/Y/R/B/O	NT_006350	AC009528	19129114	1	RH33811			4	10020.00			3	AC012525, AC109517, AC110771,	AC009528, AC012525, AC109517, AC110771
S/G/Y/R/B/O	NT_006350	AC009528	19129242	1	RH26601	4	683.47					2	AC012525, AC109517, AC110771,	AC009528, AC012525, AC109517, AC110771
S/G/Y/R/B/O	NT_006350	AC009528	19129309	1	RH98214	4	683.27					3	AC012525, AC109517, AC110771,	AC009528, AC012525, AC109517, AC110771
S/G/Y/R/B/O	NT_006350	AC009528	19131308	1	WI-7478					4	746.20	3	AC012525, AC109517, AC110771,	AC009528, AC012525, AC109517, AC110771, AF232734
S/G/Y/R/B/O	NT_006350	AC009528	19135365	1	RH59072	4	683.58	4	10020.00	4	746.10	3	AC012525, AC110771,	AC009528, AC012525, AC110771