Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_016606

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_016606	AC080029	152017486	1
S/G/Y/R/B/O	NT_016606	AC109811	152023217	3
S/G/Y/R/B/O	NT_016606	AC097649	152178675	3	RH93603	4	623.18					1		AC097649
S/G/Y/R/B/O	NT_016606	AC096757	152219887	3	RH46899	4	623.18					1		AC096757
S/G/Y/R/B/O	NT_016606	AC096757	152311902	3	RH70908	4	623.18					1		AC096757, L24115
S/G/Y/R/B/O	NT_016606	AC096757	152318133	3	RH8344			4	7979.00			1		AC005842, AC096757
S/G/Y/R/B/O	NT_016606	AC096757	152321205	3	RH52775	12	0.00			12	56.60	1		AC096757
S/G/Y/R/B/O	NT_016606	AC096757	152336494	3	RH59280	4	623.18	4	7979.00	4	675.60	1		AC096757
S/G/Y/R/B/O	NT_016606	AC096757	152342538	3	RH9036			4	7979.00			1		AC096757
S/G/Y/R/B/O	NT_016606	AC114753	152404890	3
S/G/Y/R/B/O	NT_016606	AC079228	152519582	3	WI-2983					4	675.60	1		AC024279, AC079228
S/G/Y/R/B/O	NT_016606	AC079228	152560242	3	RH91589	11	228.98					3	AC090339, AC090382, AC091102, AP000633, AP000753, AP001193, AP001844, AP001871,	AC079228, AC090339, AC090382, AC091102, AF059529, AP000633, AP000753, AP001140, AP001193, AP001844, AP001871
S/G/Y/R/B/O	NT_016606	AC096726	152568097	3
S/G/Y/R/B/O	NT_016606	AC093796	152671600	3	AFMB327ZG1					4	675.60	1		AC093796
S/G/Y/R/B/O	NT_016606	AC093796	152680622	3	RH103506	4	623.24					1		AC093796
S/G/Y/R/B/O	NT_016606	AC093796	152741197	3	RH10358	4	623.18					1		AC093796
S/G/Y/R/B/O	NT_016606	AC093796	152742168	3	RH102368	4	623.18					1		AC093796
S/G/Y/R/B/O	NT_016606	AC093864	152801716	3	RH98423	4	623.18					1		AC093864
S/G/Y/R/B/O	NT_016606	AC093864	152829652	3	RH59285	4	624.06			4	677.20	1		AC093864
S/G/Y/R/B/O	NT_016606	AC093864	152829798	3	RH12065	4	623.18					1		AC093864
S/G/Y/R/B/O	NT_016606	AC093864	152829809	3	RH16781	4	623.18					1		AC093864
S/G/Y/R/B/O	NT_016606	AC093864	152839875	3	RH35812	4	623.18					1		AC093864
S/G/Y/R/B/O	NT_016606	AC093864	152843051	3	SGC32504					4	675.50	1		AC093864
S/G/Y/R/B/O	NT_016606	AC093864	152843161	3	RH25971	4	623.03					1		AC093864
S/G/Y/R/B/O	NT_016606	AC107212	152941119	3	RH25722	4	630.24					1		AC107212
S/G/Y/R/B/O	NT_016606	AC107212	152941151	3	RH93608	4	628.00					1		AC107212
S/G/Y/R/B/O	NT_016606	AC107212	152942460	3	RH25987	4	625.67					1		AC107212
S/G/Y/R/B/O	NT_016606	AC107212	152942693	3	RH68925	4	628.10					1		AC107212
S/G/Y/R/B/O	NT_016606	AC104791	153041494	3	RH74461	4	628.00					1		AC104791
S/G/Y/R/B/O	NT_016606	AC104791	153041494	3	RH345			4	8006.00			1		AC104791
S/G/Y/R/B/O	NT_016606	AC108206	153132600	3
S/G/Y/R/B/O	NT_016606	AC097372	153294770	3	RH102591	4	624.37					1		AC097372
S/G/Y/R/B/O	NT_016606	AC097372	153316835	3	AFM282ZE5					4	677.20	1		AC011962, AC097372
S/G/Y/R/B/O	NT_016606	AC097372	153362028	3	RH26938	4	631.56					1		AC011962, AC097372
S/G/Y/R/B/O	NT_016606	AC093863	153438331	3	RH41356	4	624.53					1		AC011962, AC093863
S/G/Y/R/B/O	NT_016606	AC068217	153600201	1
S/G/Y/R/B/O	NT_016606	AC104824	153647459	1
S/G/Y/R/B/O	NT_016606	AC067842	153700882	1
S/G/Y/R/B/O	NT_016606	AC093887	153721201	3
S/G/Y/R/B/O	NT_016606	AC106050	153914087	3
S/G/Y/R/B/O	NT_016606	AC097497	154123451	3	WI-9843					4	680.00	1	AC012348, AC092435,	AC012348, AC092435, AC097497
S/G/Y/R/B/O	NT_016606	AC092435	154216042	3	RH59000	4	625.78			4	680.00	1	AC012348,	AC012348, AC092435
S/G/Y/R/B/O	NT_016606	AC092435	154216996	3	RH17610	4	630.11					1	AC012348,	AC012348, AC092435
S/G/Y/R/B/O	NT_016606	AC012348	154244698	1
S/G/Y/R/B/O	NT_016606		-		RH26922	4	623.18					0
S/G/Y/R/B/O	NT_016606		-		RH78655	4	625.57					0