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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022831
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022831AC020593488452653CM4.100    4283.501 AC020593
S/G/Y/R/B/O NT_022831AC020593489402783D4S1183    4266.701 AC020593
S/G/Y/R/B/O NT_022831AC105444489563473SGC32772    4283.001 AC105444
S/G/Y/R/B/O NT_022831AC079927489788843WI-1966    4272.201 AC079927
S/G/Y/R/B/O NT_022831AC068037490567223RH13849  42981.00  1 AC068037
S/G/Y/R/B/O NT_022831AC068037490567223RH7898  42981.00  1 AC068037
S/G/Y/R/B/O NT_022831AC096952493427823SGC31162    4276.901 AC096952, AC108054
S/G/Y/R/B/O NT_022831AC096952493442413RH413624251.59    1AC024191, AC024191, AC096952, AC108054
S/G/Y/R/B/O NT_022831AC024191494157671RH8539  42953.00  1AC096952, AC024191, AC096952, AC108054
S/G/Y/R/B/O NT_022831AC024191494191451RH8535  42939.00  1AC096952, AC024191, AC096952, AC108054
S/G/Y/R/B/O NT_022831AC024191494193901WI-6739    4264.501AC096952, AC024191, AC096952, AC108054
S/G/Y/R/B/O NT_022831AC098873494747563          
S/G/Y/R/B/O NT_022831AC079118496567783D4S518    4283.701 AC079118
S/G/Y/R/B/O NT_022831AC079118496956483RH706084248.99    1 AC079118
S/G/Y/R/B/O NT_022831AC079118497044833RH2017  42890.00  1 AC079118
S/G/Y/R/B/O NT_022831AC096749497554163RH705454250.48    1 AC096749, U07794, U34374
S/G/Y/R/B/O NT_022831AC096749497749133RH706074250.36    1 AC096749, U34379
S/G/Y/R/B/O NT_022831AC096749497753813RH170844249.98    1 AC096749
S/G/Y/R/B/O NT_022831AC107068499053513RH28738  42917.00  1 AC107068
S/G/Y/R/B/O NT_022831AC107068499054003RH178964246.76    1 AC107068
S/G/Y/R/B/O NT_022831AC107068499054743RH593314249.64  4251.701 AC107068
S/G/Y/R/B/O NT_022831AC107068500000193RH649924249.64    1AC104646, AC104646, AC107068
S/G/Y/R/B/O NT_022831AC104646500406941          
S/G/Y/R/B/O NT_022831AC092597501063941          
S/G/Y/R/B/O NT_022831AC107398502489251WI-6877    4256.601AC092597, AC092597, AC107398
S/G/Y/R/B/O NT_022831AC107398502489251RH589504223.73    1AC092597, AC092597, AC107398
S/G/Y/R/B/O NT_022831AC107398526819071RH170864248.07    1 AC107398
S/G/Y/R/B/O NT_022831AC107398528863081RH596404247.74  4251.501 AC107398
S/G/Y/R/B/O NT_022831AC107398528878251RH173234251.16    1 AC107398
S/G/Y/R/B/O NT_022831AC068526502968561          
S/G/Y/R/B/O NT_022831AC107402503028991          
S/G/Y/R/B/O NT_022831AC027271503052883          
S/G/Y/R/B/O NT_022831AC104784504844083RH805064309.28    1AC068526, AC068526
S/G/Y/R/B/O NT_022831AC093858505320411RH414314301.31    1AC068526, AC068526, AC093858, Y09781
S/G/Y/R/B/O NT_022831AC093858505331071RH8345  43133.00  1AC068526, AC068526, AC093858, Y09781
S/G/Y/R/B/O NT_022831AC093858505350311RH761554289.99    1AC068526, AC068526, AC093858, Y09781
S/G/Y/R/B/O NT_022831AC093858506083381RH659574308.26    1AC107402, AC093858, AC107402
S/G/Y/R/B/O NT_022831AC093880506749403RH424254301.31  4340.701 AC093880
S/G/Y/R/B/O NT_022831AC093880506749403RH29128  43141.00  1 AC093880
S/G/Y/R/B/O NT_022831AC026669508433453          
S/G/Y/R/B/O NT_022831AC097522508662053          
S/G/Y/R/B/O NT_022831AC026448511023733RH106604303.13    1 AC012538, AC026448
S/G/Y/R/B/O NT_022831AC026448511055573RH750804313.74    1 AC012538, AC026448
S/G/Y/R/B/O NT_022831AC026448511512333RH414144303.64    1 AC012538, AC026448
S/G/Y/R/B/O NT_022831AC104066511755523          
S/G/Y/R/B/O NT_022831AC112252513020263          
S/G/Y/R/B/O NT_022831AC023154513021763          
S/G/Y/R/B/O NT_022831AC023107514891803          
S/G/Y/R/B/O NT_022831AC108153515885971          
S/G/Y/R/B/O NT_022831AC079995516074823          


  NT_022831 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022831AC098821517971963          
S/G/Y/R/B/O NT_022831AC058822519479733RH414064313.96    1 AC058822
S/G/Y/R/B/O NT_022831AC058822519488733RH105004312.74    1 AC058822
S/G/Y/R/B/O NT_022831AC058822519488763RH791894325.02    1 AC058822
S/G/Y/R/B/O NT_022831AC058822519511503RH261404330.57    1 AC058822
S/G/Y/R/B/O NT_022831AC058822519846533RH650114329.92    1 AC058822
S/G/Y/R/B/O NT_022831AC095040520464653RH156364312.79    1AC048370, AC048370, AC095040
S/G/Y/R/B/O NT_022831AC021985521324241          
S/G/Y/R/B/O NT_022831AC048370521560531          
S/G/Y/R/B/O NT_022831AC016488521862861          
S/G/Y/R/B/O NT_022831AC105384522534113          
S/G/Y/R/B/O NT_022831AC110792524717071RH591474327.28    1AC069068, AC069068, AC110298, AC110792
S/G/Y/R/B/O NT_022831AC110792524717071SGC35001    4410.101AC069068, AC069068, AC110298, AC110792
S/G/Y/R/B/O NT_022831AC110792524757781RH650844331.00    1 AC110792
S/G/Y/R/B/O NT_022831AC069068525497911RH154164323.61    1 AC110298
S/G/Y/R/B/O NT_022831AC069068525497911RH28708  43214.00  1 AC110298
S/G/Y/R/B/O NT_022831AC009614525520461          
S/G/Y/R/B/O NT_022831AC026580525568911          
S/G/Y/R/B/O NT_022831AC098587529127481RH687334313.63    1 AC025013, AC098587
S/G/Y/R/B/O NT_022831AC098587529443671CHLC.GATA8D12.476    4419.301 AC025013, AC098587
S/G/Y/R/B/O NT_022831AC016089527458461          
S/G/Y/R/B/O NT_022831AC098868530226863RH649624318.16    1AC016089, AC098587, AC016089, AC025013, AC098587, AC098868
S/G/Y/R/B/O NT_022831AC098868531018973RH589594350.90  4426.001AC016089, AC016089, AC098868
S/G/Y/R/B/O NT_022831AC006552532016923CHLC.GATA61B02    4355.701 AC006552
S/G/Y/R/B/O NT_022831AC006552533294663RH413324315.03    1AC006553, AC092545, AC006552, AC006553, AC092545, L04143, U63834
S/G/Y/R/B/O NT_022831AC092545533696043RH591084330.52    1AC006553, AC084839, AC006553, AC084839, AC092545, L04143
S/G/Y/R/B/O NT_022831AC092545533696043WI-7599    4417.901AC006553, AC084839, AC006553, AC084839, AC092545, L04143
S/G/Y/R/B/O NT_022831AC092545533696753RH28775  43226.00  1AC006553, AC084839, AC006553, AC084839, AC092545, L04143, U63834, X69316
S/G/Y/R/B/O NT_022831AC092545533992863D4S428    4355.701 AC092545
S/G/Y/R/B/O NT_022831AC097494534253833          
S/G/Y/R/B/O NT_022831AC084839535676181          
S/G/Y/R/B/O NT_022831AC006553535744501          
S/G/Y/R/B/O NT_022831 - RH169874316.26    1AC111194, AC111194
S/G/Y/R/B/O NT_022831 - RH332  43226.00  1AC098825, AC098825
S/G/Y/R/B/O NT_022831 - WI-19172    4258.601AC097712, AC097712
S/G/Y/R/B/O NT_022831 - RH414234311.84    1AC068478, AC068620, AC068478, AC068620
S/G/Y/R/B/O NT_022831 - RH8618  43061.00  1AC068620, AC068620
S/G/Y/R/B/O NT_022831 - WI-6144    4261.401AC107392, AC107392
S/G/Y/R/B/O NT_022831 - RH650634330.52    0AC006553, AC084839, AC092545, AC006553, AC084839, AC092545, L04143, U63834, X69316
S/G/Y/R/B/O NT_022831 - RH8707  42963.00  0  
S/G/Y/R/B/O NT_022831 - RH982674330.09    0