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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_030642
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030642AC096768859653413RH33799  44575.00  1 AC096768
S/G/Y/R/B/O NT_030642AC096768859653763RH99994448.81    1 AC096768
S/G/Y/R/B/O NT_030642AC096768860201233RH711834448.92    1 AC096768
S/G/Y/R/B/O NT_030642AC096768860216573RH1033624449.12    1 AC096768
S/G/Y/R/B/O NT_030642AC021192861635383RH924064444.75    1 AC021192, AC069056
S/G/Y/R/B/O NT_030642AC024192863216893          
S/G/Y/R/B/O NT_030642AC096716864204773RH320  44645.00  1 AC096716
S/G/Y/R/B/O NT_030642AC114764865588041          
S/G/Y/R/B/O NT_030642AC079160866421403CHLC.ATA2A03    4492.201AC114764, AC079160, AC114764
S/G/Y/R/B/O NT_030642AC025538867311343          
S/G/Y/R/B/O NT_030642AC104063868906123          
S/G/Y/R/B/O NT_030642AC096766869651623D4S2345    4494.701 AC096766
S/G/Y/R/B/O NT_030642AC096766869755823RH8005  44686.00  1 AC096766
S/G/Y/R/B/O NT_030642AC096766870431733CHLC.GATA29B12    4494.901 AC096766
S/G/Y/R/B/O NT_030642AC104082872065593RH759074450.06    1 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC104082872068883RH260134450.27    1 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC104082872090333RH121054450.27    1 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC104082872275513RH121164451.71    1 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC104082872287373RH38358  44697.004497.101 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC104082872287373RH595144451.82    1 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC104082872304083RH658424451.61    1 AC015775, AC104082
S/G/Y/R/B/O NT_030642AC095046873373603RH178324451.41    1 AC095046
S/G/Y/R/B/O NT_030642AC095046873375233RH671924451.41    1 AC095046
S/G/Y/R/B/O NT_030642AC095046873633183RH413524451.20    1AC110806, AC095046, AC110806
S/G/Y/R/B/O NT_030642AC095046873667653RH33692  44691.00  1AC110806, AC095046, AC110806
S/G/Y/R/B/O NT_030642AC110806874459491          
S/G/Y/R/B/O NT_030642AC108021875202893RH989124451.61    1AC083768, AC110806, AC083768, AC108021, AC110806
S/G/Y/R/B/O NT_030642AC108021875664183RH934124451.71    1 AC108021
S/G/Y/R/B/O NT_030642AC083768876475501          
S/G/Y/R/B/O NT_030642 - RH1026224450.06    1AC034139, AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_030642 - RH1039784450.16    1AC110760, AC110760
S/G/Y/R/B/O NT_030642 - RH1039844450.06    1AC053527, AC053527, AP002857
S/G/Y/R/B/O NT_030642 - RH1042584450.06    1AC093677, AC013573, AC093677, AP001194
S/G/Y/R/B/O NT_030642 - RH119034450.06    1AC016124, AC055774, AC104828, AC016124, AC055774, AC104828
S/G/Y/R/B/O NT_030642 - RH268534450.06    1AC115628, AC115628
S/G/Y/R/B/O NT_030642 - RH358314450.27    1  
S/G/Y/R/B/O NT_030642 - RH413264450.01    1AC097709, AC010784, AC046188, AC097709
S/G/Y/R/B/O NT_030642 - RH452974450.06    0  
S/G/Y/R/B/O NT_030642 - RH468914450.01    1AC053517, AC110615, AC053517, AC110615, AP002858
S/G/Y/R/B/O NT_030642 - RH476514450.01    1AC110615, AC110615, AP002858
S/G/Y/R/B/O NT_030642 - RH486254450.06    1AC093870, AC093870
S/G/Y/R/B/O NT_030642 - RH589644450.01    1AC015499, AC110795, AC110802, AC015499, AC110795, AC110802, AP002875
S/G/Y/R/B/O NT_030642 - RH590584450.06    1AC110795, AC110795, AP002875
S/G/Y/R/B/O NT_030642 - RH591424450.06    0  
S/G/Y/R/B/O NT_030642 - RH594074450.01    1AC107072, AC025141, AC107072, AP002876
S/G/Y/R/B/O NT_030642 - RH594344450.06    1AC034139, AC110795, AC034139, AC110795
S/G/Y/R/B/O NT_030642 - RH594514450.27    1AC110615, AC115628, AC110615, AC115628
S/G/Y/R/B/O NT_030642 - RH595284449.96    1AC110615, AC115628, AC110615, AC115628
S/G/Y/R/B/O NT_030642 - RH595624450.06    1AC097709, AC010784, AC046188, AC097709
S/G/Y/R/B/O NT_030642 - RH595784450.01    1AC053527, AC053527, AP002857


  NT_030642 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030642 - RH595794450.06    1AC053527, AC053527
S/G/Y/R/B/O NT_030642 - RH659904450.27    1  
S/G/Y/R/B/O NT_030642 - RH762144450.06    1AC097709, AC010784, AC046188, AC097709
S/G/Y/R/B/O NT_030642 - RH766014450.27    1AC092438, AC010784, AC092438, AL133124
S/G/Y/R/B/O NT_030642 - RH913274450.06    1AC096759, AC096759
S/G/Y/R/B/O NT_030642 - RH990424449.96    1AC110615, AC115628, AC110615, AC115628, AP002858