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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006258
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006258AC0243641475595141          
S/G/Y/R/B/O NT_006258AC0483781475710161RH76813  47661.00  1 AC048378
S/G/Y/R/B/O NT_006258AC0095871475799091CHLC.GATA107    4669.601 AC009587
S/G/Y/R/B/O NT_006258AC1080601477701263RH666854617.07    1AC024364, AC024364, AC108060
S/G/Y/R/B/O NT_006258AC1080601478138423WI-11228    4669.601AC024364, AC024364, AC108060
S/G/Y/R/B/O NT_006258AC1080601478315573RH14728  47818.00  1AC023350, AC024364, AC023350, AC024364, AC108060
S/G/Y/R/B/O NT_006258AC0233501478695481          
S/G/Y/R/B/O NT_006258AC0938601479501793RH1036484618.40    1AC023350, AC023350, AC093860
S/G/Y/R/B/O NT_006258AC1080771481608193RH413634617.07    1 AC025879, AC108077
S/G/Y/R/B/O NT_006258AC0974761481666003RH1025174616.97    1AC108077, AC025879, AC097476, AC108077
S/G/Y/R/B/O NT_006258AC0974761482782823WI-4413    4671.201AC015744, AC015744, AC097476
S/G/Y/R/B/O NT_006258AC0967741484016423RH481934615.83    1AC015744, AC015744, AC096774
S/G/Y/R/B/O NT_006258AC0967741484562843RH1033944615.30    1 AC096774, X91233
S/G/Y/R/B/O NT_006258AC0967741484569743WI-9355    4668.101 AC096774, X91233
S/G/Y/R/B/O NT_006258AC0967741484569743RH592584615.19    1 AC096774, X91233
S/G/Y/R/B/O NT_006258AC0685181485024511          
S/G/Y/R/B/O NT_006258AC0157441485058651          
S/G/Y/R/B/O NT_006258AC1040671486499753WI-524    4668.101 AC104067
S/G/Y/R/B/O NT_006258AC0975041487655683CHLC.GATA49E02    4668.101 AC097504
S/G/Y/R/B/O NT_006258AC0975041488932703RH478734615.19    1 AC097504
S/G/Y/R/B/O NT_006258AC0975041489152753RH152694616.14    1 AC097504
S/G/Y/R/B/O NT_006258AC0975041489152753RH318  47743.00  1 AC097504
S/G/Y/R/B/O NT_006258AC1072201489576113RH413344615.87    1 AC011940, AC107220
S/G/Y/R/B/O NT_006258AC0939051489949203          
S/G/Y/R/B/O NT_006258AC0974751492523733RH309  47728.00  1 AC097475
S/G/Y/R/B/O NT_006258AC0967331493260773RH413384615.93    1 AC096733
S/G/Y/R/B/O NT_006258AC0967331493305563RH1020004616.66    1 AC096733
S/G/Y/R/B/O NT_006258AC0967331493314833RH757244615.35    1 AC096733
S/G/Y/R/B/O NT_006258AC0967331493319523RH413134615.93    1 AC096733
S/G/Y/R/B/O NT_006258AC0967331493614593CHLC.GATA11E09    4666.601 AC096733
S/G/Y/R/B/O NT_006258AC0967331494760733RH922564613.61    1 AC096733
S/G/Y/R/B/O NT_006258AC0967331494883463WI-3854    4666.601 AC096733
S/G/Y/R/B/O NT_006258AC1080191495709993WI-20032    4666.601AC025490, AC025490, AC098584, AC108019
S/G/Y/R/B/O NT_006258AC1080191495709993RH590454613.72    1AC025490, AC025490, AC098584, AC108019
S/G/Y/R/B/O NT_006258AC1080191495710073RH105754614.56    1AC025490, AC025490, AC098584, AC108019
S/G/Y/R/B/O NT_006258AC1080191496238343RH336  47698.00  1AC025490, AC025490, AC108019
S/G/Y/R/B/O NT_006258AC0936711496383393RH766464614.66    1AC025490, AC025490, AC093671, AC098584
S/G/Y/R/B/O NT_006258AC0936711496383623RH989184613.61    1AC025490, AC025490, AC093671, AC098584
S/G/Y/R/B/O NT_006258AC0936711496415273RH920214614.62    1AC025490, AC025490, AC093671, AC098584
S/G/Y/R/B/O NT_006258AC1095911498031401RH679464614.56    1AC048378, AC093671, AC114771, AC011079, AC048378, AC093671, AC109591, AC114771
S/G/Y/R/B/O NT_006258AC1095911498254271RH7827012292.47    2AC017029, AC026104, AC078814, AC017029, AC026104, AC078814
S/G/Y/R/B/O NT_006258AC1095911498313021RH805874615.40    1 AC109591
S/G/Y/R/B/O NT_006258AC1147711498436791          
S/G/Y/R/B/O NT_006258AC0254901499042241          
S/G/Y/R/B/O NT_006258AC0692721499065793          
S/G/Y/R/B/O NT_006258AC1068891500669381          
S/G/Y/R/B/O NT_006258AC1046911502440301RH111054633.55    1AC093881, AC093881, AC104691, M80582
S/G/Y/R/B/O NT_006258AC0938811502476663          
S/G/Y/R/B/O NT_006258AC1081431503876131          
S/G/Y/R/B/O NT_006258AC1166461504273631          


  NT_006258 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006258AC0265531504910262          
S/G/Y/R/B/O NT_006258AC0936481506254023RH454854634.90    1AC026553, AC026553, AC069422, AC093648, AC108935
S/G/Y/R/B/O NT_006258AC0024601507072933          
S/G/Y/R/B/O NT_006258AC1081561508802453          
S/G/Y/R/B/O NT_006258AC0938081509666061          
S/G/Y/R/B/O NT_006258AC0974651512411053D4S3008    4682.801AC108168, AC091025, AC097465, AC108168
S/G/Y/R/B/O NT_006258AC1081681513092141RH30881  48106.00  1AC027058, AC027058, AC091025, AC108168
S/G/Y/R/B/O NT_006258AC0270581513229613          
S/G/Y/R/B/O NT_006258AC1089321514476681          
S/G/Y/R/B/O NT_006258AC0938931514632673          
S/G/Y/R/B/O NT_006258AC0967561516635713          
S/G/Y/R/B/O NT_006258AC1111911518125891          
S/G/Y/R/B/O NT_006258AC1053431519088203          
S/G/Y/R/B/O NT_006258 - WI-5722    4672.702AC093890, AC109812, AC109812, AC016359, AC016359, AC093890, AC109812, AC109812
S/G/Y/R/B/O NT_006258 - WI-15195    4672.701AC025019, AC098588, AC025019, AC098588
S/G/Y/R/B/O NT_006258 - D4S3137    4672.701AC109812, AC016359, AC109812
S/G/Y/R/B/O NT_006258 - SGC33884    4674.101AC093890, AC107223, AC109812, AC110762, AC016359, AC093890, AC107223, AC109812, AC110762