Home    Genome Browser    BLAT Search    Help
  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006111
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006111AC1074645049231RH8090446.99    1 AC107464
S/G/Y/R/B/O NT_006111AC1074645156951RH1113548.80    1 AC107464
S/G/Y/R/B/O NT_006111AC1074646074651RH48836417.07    1 AC107464
S/G/Y/R/B/O NT_006111AC1074646175401RH59406417.07  45.101AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646368301RH26654417.07    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646369321RH16417417.07    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646370491RH59149417.07  47.001AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646385081RH48696417.07    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646391381RH44957416.97    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646400461RH17307417.07    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646404081RH74517  474.00  1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646555311RH18288415.63    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111AC1074646579201RH78792415.63    1AC022255, AC022255, AC107464
S/G/Y/R/B/O NT_006111X626954641803RH67787416.97    1AC107464, AC107464, X90590
S/G/Y/R/B/O NT_006111X626954642043RH17895417.07    1 X62695
S/G/Y/R/B/O NT_006111X626954647023RH5953046.57    1AC107464, AC107464, X90590
S/G/Y/R/B/O NT_006111X626954647023WI-19161    415.401AC107464, AC107464, X90590
S/G/Y/R/B/O NT_006111X626954734513RH99115417.07    1 X62695
S/G/Y/R/B/O NT_006111AC0222555192091          
S/G/Y/R/B/O NT_006111AC1165655658151RH5942447.85427.0044.101 AC116565
S/G/Y/R/B/O NT_006111AC1165655658451RH12773417.07    1 AC116565
S/G/Y/R/B/O NT_006111AC0925746985633RH11983412.72    1AC116565, AC092574, AC116565
S/G/Y/R/B/O NT_006111AC0925747251943RH66692412.72    1AC116565, AC092574, AC116565
S/G/Y/R/B/O NT_006111AC0925747647443RH36065412.52    1AC116565, AC092574, AC116565
S/G/Y/R/B/O NT_006111AC0925747786823RH67714412.32    1 AC092574
S/G/Y/R/B/O NT_006111AC0925748316043RH2037  416.00  1 AC092574
S/G/Y/R/B/O NT_006111AC0791409665853RH67491412.72    1AC108475, AC079140, AC108475
S/G/Y/R/B/O NT_006111AC1084759890351          
S/G/Y/R/B/O NT_006111AC01910311225131RH2715343.95    1 AC019103
S/G/Y/R/B/O NT_006111AC01910311397661RH7657440.00    1 AC019103
S/G/Y/R/B/O NT_006111AC01910311398201RH41432422.24    1 AC019103
S/G/Y/R/B/O NT_006111AC01910311437781RH80288418.31    1 AC019103, M95740
S/G/Y/R/B/O NT_006111AC01910311468011RH70544420.22    1 AC019103, M95740
S/G/Y/R/B/O NT_006111AC01910311621871RH79566422.34    1 AC019103
S/G/Y/R/B/O NT_006111AC01910311628011RH66591422.34    1 AC019103
S/G/Y/R/B/O NT_006111AC02276312509341          
S/G/Y/R/B/O NT_006111AC09253512705573RH15494420.32    1AC022763, AC022763, AC092535
S/G/Y/R/B/O NT_006111AC09253513313843RH59240422.24  415.201AC022763, AC022763, AC092535
S/G/Y/R/B/O NT_006111AC09253513381323RH59492422.24  414.401AC022763, AC022763, AC092535
S/G/Y/R/B/O NT_006111AC09253513520993RH17556420.32    1AC022763, AC022763, AC092535
S/G/Y/R/B/O NT_006111AC09253513759283RH41962422.24    1AC022763, AC078852, AC022763, AC078852, AC092535
S/G/Y/R/B/O NT_006111AC09253513762453RH18046422.24    1AC022763, AC078852, AC022763, AC078852
S/G/Y/R/B/O NT_006111AC09253514168563WI-22145    413.701AC078852, AC078852, AC092535
S/G/Y/R/B/O NT_006111AC09253514168563RH59114424.06    1AC078852, AC078852, AC092535
S/G/Y/R/B/O NT_006111AC09253514191503RH59301422.24  413.702AC022763, AC073518, AC078852, AC022763, AC073518, AC078852, AC092535
S/G/Y/R/B/O NT_006111AC07885215043781RH59237422.34  414.401 AC078852
S/G/Y/R/B/O NT_006111AC07885215044411RH91095422.34    1 AC078852
S/G/Y/R/B/O NT_006111AC07885215128231RH68001420.22    1 AC078852
S/G/Y/R/B/O NT_006111 - RH10065415.15    0  
S/G/Y/R/B/O NT_006111 - RH102035422.34    0  


  NT_006111 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006111 - RH18252415.53    0  
S/G/Y/R/B/O NT_006111 - RH25805422.24    0  
S/G/Y/R/B/O NT_006111 - RH36273412.72    0  
S/G/Y/R/B/O NT_006111 - RH41391412.72    0  
S/G/Y/R/B/O NT_006111 - RH41410422.24    0  
S/G/Y/R/B/O NT_006111 - RH44996412.72    0  
S/G/Y/R/B/O NT_006111 - RH48833415.63    0  
S/G/Y/R/B/O NT_006111 - RH59055417.79  42.500  
S/G/Y/R/B/O NT_006111 - RH59214413.9344.0044.600  
S/G/Y/R/B/O NT_006111 - RH59272412.72  44.600  
S/G/Y/R/B/O NT_006111 - RH59446412.72  47.000  
S/G/Y/R/B/O NT_006111 - RH67716413.93    0  
S/G/Y/R/B/O NT_006111 - RH74678413.93    1Z95704, Z95704
S/G/Y/R/B/O NT_006111 - RH75174422.24    0  
S/G/Y/R/B/O NT_006111 - RH7645649.22    1Z95704, Z95704
S/G/Y/R/B/O NT_006111 - RH78064422.24    0AC019103, AC019103
S/G/Y/R/B/O NT_006111 - RH78557422.24    0  
S/G/Y/R/B/O NT_006111 - RH80575413.93    0  
S/G/Y/R/B/O NT_006111 - RH92264412.72    1Z95704, Z95704