Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_006285

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_006285	AC109360	19190744	1
S/G/Y/R/B/O	NT_006285	AC073450	19190947	1
S/G/Y/R/B/O	NT_006285	AC098597	19191633	1
S/G/Y/R/B/O	NT_006285	AC009568	19432286	1
S/G/Y/R/B/O	NT_006285	AC110296	19449012	3	RH6000	4	85.83					1	AC009568,	AC009568, AC110296
S/G/Y/R/B/O	NT_006285	AC110296	19449012	3	D4S1593					4	99.00	1	AC009568,	AC009568, AC110296
S/G/Y/R/B/O	NT_006285	AC110296	19449012	3	RH28707			4	1273.00			1	AC009568,	AC009568, AC110296
S/G/Y/R/B/O	NT_006285	AC110296	19488403	3	RH28991			4	1277.00			1	AC009568,	AC009568, AC110296
S/G/Y/R/B/O	NT_006285	AC110296	19539203	3	RH47793	4	85.83					1	AC009568,	AC009568, AC110296
S/G/Y/R/B/O	NT_006285	AC108147	19569272	3
S/G/Y/R/B/O	NT_006285	AC110612	19673201	3	RH30861			4	1296.00			1		AC021536, AC110612
S/G/Y/R/B/O	NT_006285	AC110612	19680295	3	RH59043	4	89.01					1		AC021536, AC110612
S/G/Y/R/B/O	NT_006285	AC110612	19680295	3	WI-21155					4	103.60	1		AC021536, AC110612
S/G/Y/R/B/O	NT_006285	AC110612	19681875	3	RH26689	4	88.34					1		AC021536, AC110612
S/G/Y/R/B/O	NT_006285	AC110612	19724568	3	RH59278	4	89.01					1		AC021536, AC110612
S/G/Y/R/B/O	NT_006285	AC110612	19724568	3	WI-6508					4	103.40	1		AC021536, AC110612
S/G/Y/R/B/O	NT_006285	AC110612	19724621	3	RH8349			4	1319.00			1		AC021536
S/G/Y/R/B/O	NT_006285	AC110612	19724621	3	RH9952	4	92.87					1		AC021536
S/G/Y/R/B/O	NT_006285	AC096576	19775120	3	RH59464	4	88.34					1		AC021536, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19775120	3	WI-20656					4	101.40	1		AC021536, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19775224	3	RH14296			4	1311.00			1		AC021536, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19832630	3	RH59283	4	88.34					1		AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19832630	3	WI-18093					4	100.10	1		AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19864493	3	RH14407			4	1315.00			1	AC021339,	AC021339, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19864493	3	RH59582	4	89.01					1	AC021339,	AC021339, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19864493	3	SGC30526					4	104.00	1	AC021339,	AC021339, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19864506	3	RH36844	4	88.34					1	AC021339,	AC021339, AC096576
S/G/Y/R/B/O	NT_006285	AC096576	19877222	3	RH41291	4	89.76					1	AC021339,	AC021339, AC096576
S/G/Y/R/B/O	NT_006285	AC021339	19884695	1
S/G/Y/R/B/O	NT_006285	AC107462	19982312	1	RH8353			4	1323.00			1	AC021339,	AC018604, AC021339, AC107462
S/G/Y/R/B/O	NT_006285	AC113606	20084684	1	RH66354	4	88.34					1		AC113606
S/G/Y/R/B/O	NT_006285	AC113606	20087242	1	RH12353	4	93.28					1		AC113606
S/G/Y/R/B/O	NT_006285	AC110616	20347441	1	RH28551	4	87.56					2	AC096719, AC108161,	AC096719, AC108161, AC110616
S/G/Y/R/B/O	NT_006285	AC096719	20378468	3
S/G/Y/R/B/O	NT_006285		-		RH29123			4	1157.00			1	AC006840, AC114736,	AC006840, AC114736
S/G/Y/R/B/O	NT_006285		-		RH343			4	1243.00			1		AC007762
S/G/Y/R/B/O	NT_006285		-		RH38410			4	1209.00			1	AC092577, AC108011,	AC046194, AC092577, AC108011
S/G/Y/R/B/O	NT_006285		-		RH38421			4	1264.00			1		AC116641
S/G/Y/R/B/O	NT_006285		-		RH8355			4	1228.00			1	AC104065,	AC104065