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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_016354
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC0684741205230901          
S/G/Y/R/B/O NT_016354AC1057581205285591          
S/G/Y/R/B/O NT_016354AC0231191205374053          
S/G/Y/R/B/O NT_016354AC0938961207215263          
S/G/Y/R/B/O NT_016354AC0967601208771463          
S/G/Y/R/B/O NT_016354AC0975281209746573          
S/G/Y/R/B/O NT_016354AC1040871211430693          
S/G/Y/R/B/O NT_016354AC0926591211513103          
S/G/Y/R/B/O NT_016354AC0973781213098333          
S/G/Y/R/B/O NT_016354AC0967731214672503          
S/G/Y/R/B/O NT_016354AC0937721217160603RH154634568.82  4621.101AC015773, AC015773, AC093772
S/G/Y/R/B/O NT_016354AC0937721217160603RH341  47112.00  1AC015773, AC015773, AC093772
S/G/Y/R/B/O NT_016354AC0937721217624213AFMA239ZG5    4621.101AC015773, AC015822, AC015773, AC015822, AC093772
S/G/Y/R/B/O NT_016354AC0157731217751431          
S/G/Y/R/B/O NT_016354AC0158221217855931          
S/G/Y/R/B/O NT_016354AC1081481217857541          
S/G/Y/R/B/O NT_016354AC1053871218929493          
S/G/Y/R/B/O NT_016354AC0974621219209973          
S/G/Y/R/B/O NT_016354AC1107971220999701          
S/G/Y/R/B/O NT_016354AC0935911221375133RH8347  47135.00  1AC110797, AC110797
S/G/Y/R/B/O NT_016354AC0935911221483293RH1028484570.63    1AC110797, AC021286, AC093591, AC110797
S/G/Y/R/B/O NT_016354AC0935911221583733RH1030654565.69    1AC110797, AC021286, AC093591, AC110797
S/G/Y/R/B/O NT_016354AC0935911222657303RH661314570.83    1 AC021286, AC093591, AL591646
S/G/Y/R/B/O NT_016354AC1070531223306243RH592384570.6347156.004622.501 AC107053, AL591646
S/G/Y/R/B/O NT_016354AC0993401223507951RH482724570.63    1 AC099340, AL591646
S/G/Y/R/B/O NT_016354AC0993401224058351RH461714570.63    1AC108045, AC099340, AC108045
S/G/Y/R/B/O NT_016354AC0993401224142511RH1037164565.69    1AC108045, AC099340, AC108045
S/G/Y/R/B/O NT_016354AC1080451224442961RH412864570.83    1 AC108045
S/G/Y/R/B/O NT_016354AC1080451224443321RH365114570.63    1AC099340, AC099340, AC108045
S/G/Y/R/B/O NT_016354AC1080451225423471RH592514570.6347169.004622.801AC114735, AC108045, AC114735
S/G/Y/R/B/O NT_016354AC1147351225897981RH4011311242.84    1 AC009470, AP000677, AP001201, AP001920
S/G/Y/R/B/O NT_016354AC1147351225902911RH3996611236.60    1 AC009470, AC114735, AP000677, AP001201, AP001920
S/G/Y/R/B/O NT_016354AC1046641227179443          
S/G/Y/R/B/O NT_016354AC1059191228725431          
S/G/Y/R/B/O NT_016354AC0935891230098073          
S/G/Y/R/B/O NT_016354AC0926291232209473RH592914565.48  4616.401 AC092629
S/G/Y/R/B/O NT_016354AC0926291232218973RH667784565.55    1 AC092629
S/G/Y/R/B/O NT_016354AC0926291232219683RH360294565.28    1 AC092629
S/G/Y/R/B/O NT_016354AC0926291232260513RH121124565.55    1 AC092629
S/G/Y/R/B/O NT_016354AC0926291232614493RH265574564.49    1 AC092629
S/G/Y/R/B/O NT_016354AC0988651232822433          
S/G/Y/R/B/O NT_016354AC0798351233719503RH477134565.55    1 AC079835
S/G/Y/R/B/O NT_016354AC1081521234996381          
S/G/Y/R/B/O NT_016354AC0798561235546653WI-5624    4616.401 AC079856
S/G/Y/R/B/O NT_016354AC0938251236690093RH807834565.23    1 AC093825
S/G/Y/R/B/O NT_016354AC0938251236690103RH469494565.75    1 AC093825
S/G/Y/R/B/O NT_016354AC0974721239077453RH925404564.24    1 AC023143, AC097472
S/G/Y/R/B/O NT_016354AC1054211240463423RH414024562.72    1 AC025534, AC105421
S/G/Y/R/B/O NT_016354AC1054211240494763RH990754562.10    1 AC025534, AC105421
S/G/Y/R/B/O NT_016354AC1106181241119133          


  NT_016354 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC0974741241889683RH30878  46989.00  1 AC097474
S/G/Y/R/B/O NT_016354AC0974741242310543RH14721  46989.00  1 AC097474
S/G/Y/R/B/O NT_016354AC0974741242644013AFM165YC7    4613.501AC021007, AC021007, AC097474
S/G/Y/R/B/O NT_016354AC0974741242945143WI-4328    4613.501AC021007, AC021007, AC097474
S/G/Y/R/B/O NT_016354AC0210071243405771          
S/G/Y/R/B/O NT_016354AC0686941243408161          
S/G/Y/R/B/O NT_016354AC0720251243496661          
S/G/Y/R/B/O NT_016354AC1081661243824271          
S/G/Y/R/B/O NT_016354AC0224891244529743RH589824557.41  4606.101 AC022489
S/G/Y/R/B/O NT_016354AC0224891245386043RH110914560.59    1 AC022489
S/G/Y/R/B/O NT_016354AC0224891245419633RH13902  46858.00  1 AC022489, AF359939, J00264, K02056, X00695
S/G/Y/R/B/O NT_016354AC0224891245436183RH110464560.59    1 AC022489, AF359939, J00264, K02056, X00695
S/G/Y/R/B/O NT_016354AC0535451247767623RH423904560.59  4609.101 AC053545
S/G/Y/R/B/O NT_016354AC0535451247767623RH894  46853.00  1 AC053545
S/G/Y/R/B/O NT_016354AC0535451248341693RH1022914560.59    1 AC018425, AC053545
S/G/Y/R/B/O NT_016354AC0936911248544773          
S/G/Y/R/B/O NT_016354AC0212051249828503RH593884557.2446875.004609.001 AC021205
S/G/Y/R/B/O NT_016354AC0212051249881973RH175914560.59    1 AC021205
S/G/Y/R/B/O NT_016354AC1093571251165591RH5497917368.02  17419.302AC004584, AC004584, AC109357
S/G/Y/R/B/O NT_016354AC0974921252437733RH765314562.10    2 AC010354, AC097492, AC098585
S/G/Y/R/B/O NT_016354AC0264021254168053RH927974562.10    1 AC025511, AC026402
S/G/Y/R/B/O NT_016354AC0264021254887023RH987704562.10    1 AC025511, AC026402
S/G/Y/R/B/O NT_016354AC0264021254945643RH596304562.59  4614.901 AC025511, AC026402
S/G/Y/R/B/O NT_016354AC0264021254981693RH478144562.82    1 AC025511, AC026402
S/G/Y/R/B/O NT_016354AC0938211255048033          
S/G/Y/R/B/O NT_016354AC0925431256279543          
S/G/Y/R/B/O NT_016354AC0967321256858793          
S/G/Y/R/B/O NT_016354AC0937671259760383RH38227  46934.00  1 AC011572, AC093767
S/G/Y/R/B/O NT_016354AC0937671259761413RH185034562.10    1 AC011572, AC093767
S/G/Y/R/B/O NT_016354AC0937671259763753RH33812  46910.00  1 AC011572, AC093767
S/G/Y/R/B/O NT_016354AC0937671259893533RH471104562.10    1 AC011572, AC093767
S/G/Y/R/B/O NT_016354AC1080751260211393RH592644562.1046921.004611.901 AC108075
S/G/Y/R/B/O NT_016354AC1070611261819861          
S/G/Y/R/B/O NT_016354AC0096161262905451          
S/G/Y/R/B/O NT_016354AC0126551262997911          
S/G/Y/R/B/O NT_016354 - RH914384535.68    0  
S/G/Y/R/B/O NT_016354 - RH38377  46633.00  1AC110796, AC110796