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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_016297
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016297AC036185403710281RH413084167.68    1 AC027607, AC036185
S/G/Y/R/B/O NT_016297AC093271404182761RH102844168.27    1AC036185, AC027607, AC036185, AC093271
S/G/Y/R/B/O NT_016297AC093271404183631RH127964179.91    1AC036185, AC027607, AC036185, AC093271
S/G/Y/R/B/O NT_016297AC079239405261893CHLC.GATA70C04    4184.401 AC079239
S/G/Y/R/B/O NT_016297AC079239406289503RH155554156.26    1 AC079239
S/G/Y/R/B/O NT_016297AC093728406844123          
S/G/Y/R/B/O NT_016297AC093746407968463          
S/G/Y/R/B/O NT_016297AC116564409642371          
S/G/Y/R/B/O NT_016297AC022463410469623RH698104168.30    1AC093271, AC022463, AC093271
S/G/Y/R/B/O NT_016297AC022463410566323RH412784168.40    1AC093271, AC022463, AC093271
S/G/Y/R/B/O NT_016297AC022463410567003RH251954178.06    1AC093271, AC022463, AC093271
S/G/Y/R/B/O NT_016297AC022463411467113RH33256  42254.00  1AC107399, AC022463, AC107399
S/G/Y/R/B/O NT_016297AC022463411467113RH595734180.88  4189.901AC107399, AC022463, AC107399
S/G/Y/R/B/O NT_016297AC022463411468623RH412774166.05    1AC107399, AC022463, AC107399
S/G/Y/R/B/O NT_016297AC022463411468653RH473334179.91    1AC107399, AC022463, AC107399
S/G/Y/R/B/O NT_016297AC107399411745061          
S/G/Y/R/B/O NT_016297AC104690412656723RH939684179.91    1 AC007698, AC104690
S/G/Y/R/B/O NT_016297AC104690412949433RH744524161.49    1 AC104690
S/G/Y/R/B/O NT_016297AC105386413124103          
S/G/Y/R/B/O NT_016297AL136537413950933RH923744181.90    1  
S/G/Y/R/B/O NT_016297AC016181415092611          
S/G/Y/R/B/O NT_016297AC108022415961193WI-11217    4186.001 AC108022, AL390202
S/G/Y/R/B/O NT_016297AC021106417163973RH589444180.02  4192.601 AC021106, AL390202
S/G/Y/R/B/O NT_016297AC021106417166433RH258954182.07    1 AC021106, AL390202
S/G/Y/R/B/O NT_016297AC021106417172943RH33806  42276.00  1 AC021106, AL390202
S/G/Y/R/B/O NT_016297AC021106417173683RH33646  42305.00  1 AC021106, AL390202
S/G/Y/R/B/O NT_016297AC021106417173683RH591034180.02  4192.601 AC021106, AL390202
S/G/Y/R/B/O NT_016297AC021106418155743RH358964178.39    1 AC021106, AF200719
S/G/Y/R/B/O NT_016297AC021106418486933RH33181  42293.00  1 AC021106
S/G/Y/R/B/O NT_016297AC021106418486933RH591124176.25  4190.701 AC021106
S/G/Y/R/B/O NT_016297AC021106418487533RH164634183.03    1 AC021106
S/G/Y/R/B/O NT_016297AC021106418489863RH673444171.33    1 AC021106
S/G/Y/R/B/O NT_016297AC021106418763183RH925574182.35    1 AC021106
S/G/Y/R/B/O NT_016297AC021106418821643RH672504173.46    1AC108933, AC021106, AC108933
S/G/Y/R/B/O NT_016297AC108933418960273RH33008  42287.00  1 AC108933
S/G/Y/R/B/O NT_016297AC108933418960273RH593834180.02  4192.601 AC108933
S/G/Y/R/B/O NT_016297AC098680419867513RH460994182.86    1 AC098680
S/G/Y/R/B/O NT_016297AC098680419904843RH744514171.23    1 AC098680
S/G/Y/R/B/O NT_016297AC098680419904843RH306  42333.00  1 AC098680
S/G/Y/R/B/O NT_016297AC098680419920063RH591484180.02  4192.601 AC098680
S/G/Y/R/B/O NT_016297AC098680419921563RH98944173.46    1 AC098680
S/G/Y/R/B/O NT_016297AC098680419935963RH591074180.02  4192.701 AC098680
S/G/Y/R/B/O NT_016297AC098680419936043RH477224180.02    1 AC098680
S/G/Y/R/B/O NT_016297AC098680420470673RH654664180.02    1 AC098680
S/G/Y/R/B/O NT_016297AC024023423051913D4S617    4192.601 AC024023, AC079088
S/G/Y/R/B/O NT_016297AC106893423076913          
S/G/Y/R/B/O NT_016297AC096739423543573          
S/G/Y/R/B/O NT_016297AC021860425198833RH781204184.11    1 AC021860
S/G/Y/R/B/O NT_016297AC021860425380613RH685664174.08    1 AC021860
S/G/Y/R/B/O NT_016297AC021860425532973RH362064173.46    1 AC021860


  NT_016297 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016297AC021860425539003RH251534180.02    1 AC021860
S/G/Y/R/B/O NT_016297AC021860425544903RH752434182.91    1 AC021860
S/G/Y/R/B/O NT_016297AC021860425552363RH593444182.64  4189.501 AC021860