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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006256
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006256AC1072221890448061          
S/G/Y/R/B/O NT_006256AC1035401893115801RH659164681.72    1AC040939, AC040939, AC103540, AL365358
S/G/Y/R/B/O NT_006256AC0790801892069243RH316  49804.00  1AC040939, AC107222, AC040939, AC079080, AC107222, AL590713
S/G/Y/R/B/O NT_006256AC0790801892071303RH151404679.91  4744.901AC040939, AC107222, AC040939, AC079080, AC107222, AL590713
S/G/Y/R/B/O NT_006256AC0409391892949541          
S/G/Y/R/B/O NT_006256AC0993431893628773RH797104681.63    1AC103540, AC103540, AL365358
S/G/Y/R/B/O NT_006256AC0993431893655853RH14129  49813.00  1AC103540, AC099343, AC103540, AL365358
S/G/Y/R/B/O NT_006256AC0993431894334103RH592664679.9149823.004743.001AC103540, AC099343, AC103540, AL365358
S/G/Y/R/B/O NT_006256AC0993431894491513RH74624  49823.00  1AC110611, AC099343, AC110611
S/G/Y/R/B/O NT_006256AC0993431894494263RH912414679.91    1AC110611, AC099343, AC110611
S/G/Y/R/B/O NT_006256AC0993431895361503RH783254498.16    2AC084049, AP002020, AC084049, AC099343, AP002020
S/G/Y/R/B/O NT_006256AC0739321896050413RH251584681.63    1AC060790, AC079257, AC084049, AC060790, AC073932, AC079257, AC084049
S/G/Y/R/B/O NT_006256AC0840491896060981RH8093  49797.00  1AC060790, AC079257, AC060790, AC079257, AC084049
S/G/Y/R/B/O NT_006256AC0840491896106251RH464864681.72    1AC060790, AC079257, AC060790, AC079257, AC084049
S/G/Y/R/B/O NT_006256AC0607901896419702WI-3512    4744.901AC079257, AC060790, AC079257
S/G/Y/R/B/O NT_006256AC0792571905867231RH365374681.63    1AC060790, AC060790, AC079257
S/G/Y/R/B/O NT_006256AC0792571905868121RH924804681.92    1AC060790, AC060790, AC079257
S/G/Y/R/B/O NT_006256AC0792571905871631RH33665  49833.00  1AC060790, AC060790, AC079257
S/G/Y/R/B/O NT_006256AC0792571905872011RH788614681.63    1AC060790, AC060790, AC079257
S/G/Y/R/B/O NT_006256AC0792571906482061RH594844681.63  4744.901AC060790, AC068307, AC024441, AC060790, AC068307, AC079257
S/G/Y/R/B/O NT_006256AC0792571906491931RH108294681.6349773.00  1AC060790, AC068307, AC024441, AC060790, AC068307, AC079257
S/G/Y/R/B/O NT_006256AC0792571906493351RH8630  49773.00  1AC060790, AC068307, AC024441, AC060790, AC068307, AC079257
S/G/Y/R/B/O NT_006256AC0800701896546271          
S/G/Y/R/B/O NT_006256AC0797661896881021RH13931  49626.00  1 AC079766, L39874
S/G/Y/R/B/O NT_006256AC0797661896890321RH176144678.18    1 AC079766, AC114798, L39874
S/G/Y/R/B/O NT_006256AC0191931899093163RH990224678.23    1 AC019193
S/G/Y/R/B/O NT_006256AC0191931899576283RH38405  49609.004741.101 AC019193
S/G/Y/R/B/O NT_006256AC0191931899576283RH591134678.18    1 AC019193
S/G/Y/R/B/O NT_006256AC0191931899576363RH123944678.23    1 AC019193
S/G/Y/R/B/O NT_006256AC0191931899578063WI-4886    4741.101 AC019193
S/G/Y/R/B/O NT_006256AC0993971899939873RH938844673.72    1  
S/G/Y/R/B/O NT_006256AC0993971900316773RH33558  49935.00  1AC093844, AC093844, AC099397
S/G/Y/R/B/O NT_006256AC0938441900686703RH592494678.23  4742.101 AC093844
S/G/Y/R/B/O NT_006256AC0938441901257633WI-16796    4741.101AC114911, AC093844, AC114911
S/G/Y/R/B/O NT_006256AC0938441901257633RH594004678.18    1AC114911, AC093844, AC114911
S/G/Y/R/B/O NT_006256AC0938441901260143RH365964678.23    1AC114911, AC093844, AC114911
S/G/Y/R/B/O NT_006256AC0938441901995273RH590494673.62    1AC112698, AC114911, AC093844, AC112698, AC114911
S/G/Y/R/B/O NT_006256AC0938441901995273WI-6619    4734.801AC112698, AC114911, AC093844, AC112698, AC114911
S/G/Y/R/B/O NT_006256AC1149111902171061RH76811  49650.00  1AC112698, AC112698, AC114911
S/G/Y/R/B/O NT_006256AC1126981909203321RH934634678.18    1AC114911, AC114911
S/G/Y/R/B/O NT_006256AC0741941902640973RH38347  49722.004744.001AC107222, AC107222
S/G/Y/R/B/O NT_006256AC0741941903373673RH596094681.72  4742.601 AC074194
S/G/Y/R/B/O NT_006256AC0741941903476363GCT8D06    4744.001 AC074194
S/G/Y/R/B/O NT_006256AC0741941904312873GCT1B3    4742.601 AC074194
S/G/Y/R/B/O NT_006256AC1053111904358133          
S/G/Y/R/B/O NT_006256AC1084771905414451RH313  49696.00  1 AC108477
S/G/Y/R/B/O NT_006256AC1084771905426091RH1026254679.91    1 AC108477
S/G/Y/R/B/O NT_006256AC1084771910862811RH364844679.91    1 AC108477
S/G/Y/R/B/O NT_006256AC1084771911183031RH934174679.81    1 AC108477
S/G/Y/R/B/O NT_006256AC1084771911366571RH592134679.8149671.004743.001 AC108477


  NT_006256 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006256AC1084771911496781RH1030894682.02    1 AC108477
S/G/Y/R/B/O NT_006256AC0848711908079211CHLC.GATA7D10    4744.901AC068307, AC024441, AC068307, AC084871
S/G/Y/R/B/O NT_006256AC0683071907473431          
S/G/Y/R/B/O NT_006256AC1072141909834731RH363864678.23    1AC112698, AC107214, AC112698
S/G/Y/R/B/O NT_006256AC1072141910471091RH592824678.69  4743.101 AC107214
S/G/Y/R/B/O NT_006256AC1072141910472341RH458184681.72    1 AC107214
S/G/Y/R/B/O NT_006256 - RH1043374681.84    0  
S/G/Y/R/B/O NT_006256 - RH489804681.74    0AC108477, AC108477
S/G/Y/R/B/O NT_006256 - RH786124681.84    0