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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006169
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006169AC1070501913285551RH1035054683.47    1AC058794, AC058794, AC107050
S/G/Y/R/B/O NT_006169AC1070501913819281RH479564683.27    1AC024664, AC058794, AC024664, AC040966, AC058794, AC107050
S/G/Y/R/B/O NT_006169AC0246641914289721          
S/G/Y/R/B/O NT_006169AC1107611914841561RH987474683.27    1AC024664, AC024664, AC110761
S/G/Y/R/B/O NT_006169AC1107611914905591RH590714683.27  4746.201AC024664, AC024664, AC110761
S/G/Y/R/B/O NT_006169AC1107611914989891RH414454683.47    1AC024664, AC024664, AC110761
S/G/Y/R/B/O NT_006169AC1107611930656901WI-3160    4746.201 AC110761
S/G/Y/R/B/O NT_006169AC0587941914580751          
S/G/Y/R/B/O NT_006169AC0938241916578303RH110494683.27    1 AC093824
S/G/Y/R/B/O NT_006169AC0938241916588533RH175834683.27    1 AC093824, J04982
S/G/Y/R/B/O NT_006169AC0938241916590033RH258474683.47    1 AC093824, J04982
S/G/Y/R/B/O NT_006169AC1122371916620113RH753014683.37    1AC093592, AC093592, AC112237
S/G/Y/R/B/O NT_006169AC1122371916621043RH260454683.16    1AC093592, AC093592, AC112237
S/G/Y/R/B/O NT_006169AC0935921916717693RH929794683.27    1 AC093592
S/G/Y/R/B/O NT_006169AC0935921918229683RH271574683.43    1AC073344, AC073344, AC093592
S/G/Y/R/B/O NT_006169AC0935921918230893RH33667  49933.00  1AC073344, AC073344, AC093592
S/G/Y/R/B/O NT_006169AC0733441918747653RH413144683.27    1AC016032, AC112722, AC016032, AC073344, AC112722
S/G/Y/R/B/O NT_006169AC0733441918761733RH593944683.27  4746.201AC016032, AC112722, AC016032, AC073344, AC112722
S/G/Y/R/B/O NT_006169AC0733441918894323RH38262  49939.00  1AC016032, AC112722, AC016032, AC073344, AC112722
S/G/Y/R/B/O NT_006169AC0160321918932121          
S/G/Y/R/B/O NT_006169AC1127221919106001RH788374683.16    1AC016032, AC106897, AC016032, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC1127221919113121RH590394683.16  4746.801AC016032, AC106897, AC016032, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC1127221919115251RH767444683.58    1AC016032, AC106897, AC016032, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC1127221919132101RH594594683.2749913.004746.201AC016032, AC106897, AC016032, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC1127221919133201RH165864683.47    1AC016032, AC106897, AC016032, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC1127221919606781RH412994683.27    1AC016032, AC106897, AC016032, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC1068971919654881          
S/G/Y/R/B/O NT_006169AC0937971920152083RH940374683.16    1AC106897, AC112722, AC093797, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC0937971920163363RH127824683.27    1AC106897, AC112722, AC093797, AC106897, AC112722
S/G/Y/R/B/O NT_006169AC0937971920231533RH482224683.16    1AC106897, AC093797, AC106897
S/G/Y/R/B/O NT_006169AC0937971920243473RH474384683.27    1AC106897, AC093797, AC106897
S/G/Y/R/B/O NT_006169AC0937971920244623RH267244683.16    1AC106897, AC093797, AC106897
S/G/Y/R/B/O NT_006169AC0937971920974403RH593554683.27  4746.201 AC093797
S/G/Y/R/B/O NT_006169AC0937971920974403RH102244683.2749939.00  1 AC093797
S/G/Y/R/B/O NT_006169AC0937971920992383RH7941  49907.00  1 AC093797
S/G/Y/R/B/O NT_006169AC0937971920992853RH590654683.27  4746.201 AC093797
S/G/Y/R/B/O NT_006169AC0937971921262083RH460204683.27    1 AC093797
S/G/Y/R/B/O NT_006169AC0937971921519073RH482244683.27    1 AC093797
S/G/Y/R/B/O NT_006169AC0937971921544803RH476694683.27    1 AC093797
S/G/Y/R/B/O NT_006169AC0937971921573753RH592994683.2749964.004746.301 AC093797
S/G/Y/R/B/O NT_006169AC0937971921585463RH482274683.27    1 AC093797
S/G/Y/R/B/O NT_006169AC0937971921600573RH755074703.38    1 AC093797
S/G/Y/R/B/O NT_006169AC1084721921952313RH463194683.16    1 AC108472
S/G/Y/R/B/O NT_006169AC1084721922074243RH701444683.58    1 AC108472
S/G/Y/R/B/O NT_006169AC1048051922401001RH703824683.27    1 AC026149, AC104805
S/G/Y/R/B/O NT_006169AC1048051922401781RH596114683.16  4745.601 AC026149, AC104805
S/G/Y/R/B/O NT_006169AC1048051922423521RH918134683.27    1 AC026149, AC104805
S/G/Y/R/B/O NT_006169AC1048051922688061RH32902  49951.00  1 AC026149, AC104805
S/G/Y/R/B/O NT_006169AC1048051923022891RH486884683.16    1 AC026149, AC104805
S/G/Y/R/B/O NT_006169AC0966591924355773RH458264683.27    1 AC096659


  NT_006169 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006169AC1040701925959481RH672694683.27    1 AC104070
S/G/Y/R/B/O NT_006169AC1040701926106211RH413474683.27    1 AC104070
S/G/Y/R/B/O NT_006169AC1107711926665571RH413014704.18    1 AC110771
S/G/Y/R/B/O NT_006169AC1107711926665571RH33428  410040.00  1 AC110771
S/G/Y/R/B/O NT_006169AC1107711926820001RH590724683.58410020.004746.103AC009528, AC012525, AC009528, AC012525, AC110771
S/G/Y/R/B/O NT_006169AC1107711927079901RH924094683.27    2AC012525, AC012525, AC110771
S/G/Y/R/B/O NT_006169AC1107711927271301RH262644683.27    2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927278111RH33811  410020.00  3AC009528, AC012525, AC109517, AC009528, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927279441RH982144683.27    3AC009528, AC012525, AC109517, AC009528, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927280061RH266014683.47    2AC009528, AC012525, AC109517, AC009528, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927417171WI-7478    4746.203AC009528, AC012525, AC109517, AC009528, AC012525, AC109517, AC110771, AF232734
S/G/Y/R/B/O NT_006169AC1107711927730121RH413244683.27    2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927730371RH2049  410007.00  2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927891631RH459214683.27    2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711927904471RH110754683.27    2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711928033201RH413234683.27    2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1107711928034351RH28721  49979.00  2AC012525, AC109517, AC012525, AC109517, AC110771
S/G/Y/R/B/O NT_006169AC1095171928154231          
S/G/Y/R/B/O NT_006169AC0187091928758143          
S/G/Y/R/B/O NT_006169 - RH270034683.27    1AC011814, AC012254, AC068678, AC069032, AC011814, AC012254, AC024316, AC068678, AC069032
S/G/Y/R/B/O NT_006169 - RH591164683.37    1AC104826, AC067900, AC104826