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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_015169
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_015169AC0133031594539822RH671634638.84    1AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031594905252RH412974638.84    1AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031594915842RH915464638.91    1AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595648642RH595034638.8448389.004686.301AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595700332RH761174638.91    1AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595700712RH590664638.84  4686.401AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595702002RH453964638.91    1AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595709322TIGR-A004U26    4688.201AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595709322RH591154635.21    1AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC0133031595709372RH590924638.8448364.004686.401AC106865, AC013303, AC104773, AC106865
S/G/Y/R/B/O NT_015169AC1068651595174151          
S/G/Y/R/B/O NT_015169AC0207031596404473RH414294639.42    1 AC020703
S/G/Y/R/B/O NT_015169AC0207031596410893RH785084638.91    1 AC020703
S/G/Y/R/B/O NT_015169AC0207031596554643WI-3844    4686.301 AC020703
S/G/Y/R/B/O NT_015169AC1081601597787873          
S/G/Y/R/B/O NT_015169AC1046571598167803          
S/G/Y/R/B/O NT_015169AC0792981600960653RH168264635.90    1AC110608, AC079298, AC110608
S/G/Y/R/B/O NT_015169AC0792981600971213WI-18613    4686.401AC110608, AC079298, AC110608
S/G/Y/R/B/O NT_015169AC0792981600971213RH594124634.06    1AC110608, AC079298, AC110608
S/G/Y/R/B/O NT_015169AC0792981600972283RH103964635.90    1AC110608, AC079298, AC110608
S/G/Y/R/B/O NT_015169AC1106081601401271          
S/G/Y/R/B/O NT_015169AC1107751602127183          
S/G/Y/R/B/O NT_015169AC1107531603548871          
S/G/Y/R/B/O NT_015169AC1073851603948453WI-6353    4686.401AC110753, AC107385, AC110753
S/G/Y/R/B/O NT_015169AC1073851603948453RH594574634.37    1AC110753, AC107385, AC110753
S/G/Y/R/B/O NT_015169AC1073851603948453RH74538  48489.00  1AC110753, AC107385, AC110753
S/G/Y/R/B/O NT_015169AC1073851603949453RH267734632.40    1 AC107385
S/G/Y/R/B/O NT_015169AC1073851603949783RH184104634.17    1AC110753, AC107385, AC110753
S/G/Y/R/B/O NT_015169AC1073851603959873RH184984635.80    1AC110753, AC107385, AC110753
S/G/Y/R/B/O NT_015169AC1073851604223963RH33651  48482.004686.401AC110753, AC107385, AC110753, AF388026
S/G/Y/R/B/O NT_015169AC1073851604223963RH595714633.96    1AC110753, AC107385, AC110753, AF388026
S/G/Y/R/B/O NT_015169AC1073851604256413RH110444635.80    1 AC009583
S/G/Y/R/B/O NT_015169AC1073851604281133SGC33313    4686.401AC110753, AC009583, AC107385, AC110753, AF388026, M64983
S/G/Y/R/B/O NT_015169AC1073851604281133RH596144633.75    1AC110753, AC009583, AC107385, AC110753, AF388026, M64983
S/G/Y/R/B/O NT_015169AC1073851604292533RH366334635.90    1AC110753, AC009583, AC107385, AC110753, AF388026, M64983
S/G/Y/R/B/O NT_015169AC1073851604303653WI-6076    4687.501 AC009583
S/G/Y/R/B/O NT_015169AC1073851604303653RH590024633.96    1 AC009583
S/G/Y/R/B/O NT_015169AC1073851604309703RH777954635.80    1AC110753, AC009583, AC107385, AC110753, AF388026, M64983
S/G/Y/R/B/O NT_015169AC1073851604322943RH32637  48457.004686.401AC110753, AC009583, AC107385, AC110753, AF388026
S/G/Y/R/B/O NT_015169AC1073851604322943RH593934634.45    1AC110753, AC009583, AC107385, AC110753, AF388026
S/G/Y/R/B/O NT_015169AC1073851604324583RH167824635.90    1AC110753, AC009583, AC107385, AC110753, AF388026
S/G/Y/R/B/O NT_015169AC1073851604376763RH33779  48457.00  1AC110753, AC009583, AC107385, AC110753
S/G/Y/R/B/O NT_015169AC1073851604429653RH14175  48495.00  1AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604437993RH413024636.00    1 AF361104
S/G/Y/R/B/O NT_015169AC1073851604450993RH14054  48495.00  1 AC009583, AF361104
S/G/Y/R/B/O NT_015169AC1073851604451803RH116424634.17    1AC110753, AC009583, AC107385, AC110753, M64982
S/G/Y/R/B/O NT_015169AC1073851604455473RH412964636.00    1AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604456263RH33377  48448.004689.701AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604456263RH593244632.82    1AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604458963SGC34595    4685.901 AC009583


  NT_015169 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_015169AC1073851604458963RH592844635.41    1 AC009583
S/G/Y/R/B/O NT_015169AC1073851604459453RH182764635.90    1AC110753, AC009583, AC107385, AC110753, AF322456, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604465023RH32591  48482.004685.901AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604465023RH595374636.00    1AC110753, AC009583, AC107385, AC110753, AF361104, M64982
S/G/Y/R/B/O NT_015169AC1073851604644223SGC35532    4685.901 AC009583
S/G/Y/R/B/O NT_015169AC1073851604644223RH593134634.17    1 AC009583
S/G/Y/R/B/O NT_015169AC1073851604649723RH110624636.00    1 AC009583, AC107385, AF350254, K02569, M10014
S/G/Y/R/B/O NT_015169AC0926161605489933RH591044639.9848482.004689.301 AC009583
S/G/Y/R/B/O NT_015169AC0095671606099503RH462474632.92    1 AC009567
S/G/Y/R/B/O NT_015169AC0095671606120993RH453374641.16    1 AC009567, AC026483
S/G/Y/R/B/O NT_015169AC0095671606882593RH1035034641.16    1 AC009567, AC026483
S/G/Y/R/B/O NT_015169AC1147391607478343          
S/G/Y/R/B/O NT_015169 - RH656684640.55    1AC098679, AC098679