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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022753
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022753AC0262191330121531          
S/G/Y/R/B/O NT_022753AC0255201330367141          
S/G/Y/R/B/O NT_022753AC0968981331134793RH33785  44182.00  2AC053517, AC110615, AC034197, AC053517, AC110615, AP002858
S/G/Y/R/B/O NT_022753AC0968981331136163RH104844425.68    2AC053517, AC110615, AC053517, AC110615, AP002858
S/G/Y/R/B/O NT_022753AC0968981331252943RH367314574.27    1 AC034197, AC069265, AC096898
S/G/Y/R/B/O NT_022753AC0968981331261983RH105264574.47    1AC025520, AC025520, AC034197, AC069265, AC096898
S/G/Y/R/B/O NT_022753AC0968981331262623RH917014574.47    1AC025520, AC025520, AC034197, AC069265, AC096898
S/G/Y/R/B/O NT_022753AC1080621332542983RH155464574.37    1 AC024911, AC034197, AC108062
S/G/Y/R/B/O NT_022753AC1080621333215213CHLC.GATA12B03    4630.001 AC024911, AC024944, AC108062
S/G/Y/R/B/O NT_022753AC1080621333749413RH413504578.87    1 AC024944
S/G/Y/R/B/O NT_022753AC0261921333795201          
S/G/Y/R/B/O NT_022753AC0788501334211753RH765554581.22    1AC026192, AC024944, AC026192, AC078850, AC110609
S/G/Y/R/B/O NT_022753AC0788501335091973RH687674580.35    1AC026192, AC026192, AC078850
S/G/Y/R/B/O NT_022753AC0788501335735023RH486564580.35    1AC108024, AC078850, AC108024
S/G/Y/R/B/O NT_022753AC1080241336006411          
S/G/Y/R/B/O NT_022753AC0214201336377331          
S/G/Y/R/B/O NT_022753AC0937831337196393RH936324580.35    1AC021420, AC108024, AC021420, AC093783, AC108024
S/G/Y/R/B/O NT_022753AC0937831337206323RH594444580.3547190.004634.101AC021420, AC108024, AC021420, AC093783, AC108024
S/G/Y/R/B/O NT_022753AC0937831337290323RH451424580.35    1AC021420, AC108024, AC021420, AC093783, AC108024
S/G/Y/R/B/O NT_022753AC0937831337337433RH413744580.46    1AC021420, AC108024, AC021420, AC093783, AC108024
S/G/Y/R/B/O NT_022753AC0938261338408293RH593664583.9247195.004639.901 AC093826
S/G/Y/R/B/O NT_022753AC0938261338736353RH806804584.25    1 AC012210, AC093826
S/G/Y/R/B/O NT_022753AC0938261338736393RH596164586.62  4642.801 AC012210, AC093826
S/G/Y/R/B/O NT_022753AC0938261338915683RH8572  47200.00  1 AC093826
S/G/Y/R/B/O NT_022753AC0938261339682993RH595254583.92  4639.901 AC027132, AC060779, AC093826, AL162593, AL353686
S/G/Y/R/B/O NT_022753AC0938261339683013RH103834583.92    1 AC027132, AC060779, AC093826, AL162593, AL353686
S/G/Y/R/B/O NT_022753AC0938261340055723WI-6670    4638.401 AC027132, AC060779, AC093826, AL162593, AL353686
S/G/Y/R/B/O NT_022753AC1054171340688343CHLC.GATA62F08    4639.901 AC060779, AC105417, AL162593, AL353686
S/G/Y/R/B/O NT_022753AC0826501340844783          
S/G/Y/R/B/O NT_022753AC0116191342518861          
S/G/Y/R/B/O NT_022753AC0950481343104853          
S/G/Y/R/B/O NT_022753AC0967551344341463          
S/G/Y/R/B/O NT_022753AC0798571346467803WI-9894    4639.901 AC079857, AC087307
S/G/Y/R/B/O NT_022753AC0924861347988073          
S/G/Y/R/B/O NT_022753AC0974811348134883          
S/G/Y/R/B/O NT_022753AC0938821349150543          
S/G/Y/R/B/O NT_022753AC1147841350854001          
S/G/Y/R/B/O NT_022753AC0965751351310913          
S/G/Y/R/B/O NT_022753AC0925401353115143          
S/G/Y/R/B/O NT_022753AC1098201354433153          
S/G/Y/R/B/O NT_022753AC0967311354864913          
S/G/Y/R/B/O NT_022753AC0938311355756943          
S/G/Y/R/B/O NT_022753AC0939021357573693RH116804587.27    1  
S/G/Y/R/B/O NT_022753AC0255541359334011          
S/G/Y/R/B/O NT_022753AC0212031360838803          
S/G/Y/R/B/O NT_022753AC1108031361605131          
S/G/Y/R/B/O NT_022753AC0341761361831523          
S/G/Y/R/B/O NT_022753AC1053921363762523          
S/G/Y/R/B/O NT_022753AC1054241363982753          
S/G/Y/R/B/O NT_022753AC1073931365806741          


  NT_022753 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022753AC0516471365883981          
S/G/Y/R/B/O NT_022753AC0246721367177571          
S/G/Y/R/B/O NT_022753AC1048211367298713          
S/G/Y/R/B/O NT_022753AC0967111368642113AFMB296ZB9    4644.401 AC032021, AC044886, AC096711
S/G/Y/R/B/O NT_022753AC0939161369630453WI-9821    4646.801 AC093916
S/G/Y/R/B/O NT_022753AC0939161370795673RH319  47345.00  1 AC093916
S/G/Y/R/B/O NT_022753AC0988661371234193          
S/G/Y/R/B/O NT_022753 - RH1022914560.59    1AC053545, AC018425, AC053545
S/G/Y/R/B/O NT_022753 - RH13902  46858.00  1AC022489, AC022489, AF359939, J00264, K02056, X00695
S/G/Y/R/B/O NT_022753 - NIB1375    4606.101AC022489, AC022489
S/G/Y/R/B/O NT_022753 - RH1028484570.63    1AC093591, AC110797, AC021286, AC093591, AC110797
S/G/Y/R/B/O NT_022753 - RH14721  46989.00  1AC097474, AC097474
S/G/Y/R/B/O NT_022753 - RH1030654565.69    1AC093591, AC110797, AC021286, AC093591, AC110797
S/G/Y/R/B/O NT_022753 - RH1037164565.69    1AC099340, AC108045, AC099340, AC108045
S/G/Y/R/B/O NT_022753 - RH110464560.59    1AC022489, AC022489, AF359939, J00264, K02056, X00695
S/G/Y/R/B/O NT_022753 - RH110914560.59    1AC022489, AC022489
S/G/Y/R/B/O NT_022753 - RH119474560.59    0  
S/G/Y/R/B/O NT_022753 - RH121124565.55    1AC092629, AC092629
S/G/Y/R/B/O NT_022753 - RH154634568.82  4609.001AC015773, AC093772, AC015773, AC093772
S/G/Y/R/B/O NT_022753 - RH175914560.59    1AC021205, AC021205
S/G/Y/R/B/O NT_022753 - RH185034562.10    1AC093767, AC011572, AC093767
S/G/Y/R/B/O NT_022753 - RH265574564.49    1AC092629, AC092629
S/G/Y/R/B/O NT_022753 - RH360294565.28    1AC092629, AC092629
S/G/Y/R/B/O NT_022753 - RH365114570.63    1AC099340, AC108045, AC099340, AC108045
S/G/Y/R/B/O NT_022753 - RH412864570.83    1AC108045, AC108045
S/G/Y/R/B/O NT_022753 - RH414024562.72    1AC105421, AC025534, AC105421
S/G/Y/R/B/O NT_022753 - RH423904560.59  4609.101AC053545, AC053545
S/G/Y/R/B/O NT_022753 - RH461714570.63    1AC099340, AC108045, AC099340, AC108045
S/G/Y/R/B/O NT_022753 - RH469494565.75    1AC093825, AC093825
S/G/Y/R/B/O NT_022753 - RH471104562.10    1AC093767, AC011572, AC093767
S/G/Y/R/B/O NT_022753 - RH477134565.55    1AC079835, AC079835
S/G/Y/R/B/O NT_022753 - RH478144562.82    1AC026402, AC025511, AC026402
S/G/Y/R/B/O NT_022753 - RH482724570.63    1AC099340, AC099340, AL591646
S/G/Y/R/B/O NT_022753 - RH592384570.6346875.004611.901AC107053, AC107053, AL591646
S/G/Y/R/B/O NT_022753 - RH30878  46989.00  1AC097474, AC097474
S/G/Y/R/B/O NT_022753 - WI-4328    4613.501AC021007, AC097474, AC021007, AC097474
S/G/Y/R/B/O NT_022753 - AFM165YC7    4613.501AC021007, AC097474, AC021007, AC097474
S/G/Y/R/B/O NT_022753 - RH592514570.6346921.004614.901AC108045, AC114735, AC108045, AC114735
S/G/Y/R/B/O NT_022753 - RH33812  46910.00  1AC093767, AC011572, AC093767
S/G/Y/R/B/O NT_022753 - WI-5624    4616.401AC079856, AC079856
S/G/Y/R/B/O NT_022753 - RH341  47112.00  1AC015773, AC093772, AC015773, AC093772
S/G/Y/R/B/O NT_022753 - RH38227  46934.00  1AC093767, AC011572, AC093767
S/G/Y/R/B/O NT_022753 - RH592644562.1047156.004616.401AC108075, AC108075
S/G/Y/R/B/O NT_022753 - RH592914565.48  4621.101AC092629, AC092629
S/G/Y/R/B/O NT_022753 - AFMA239ZG5    4621.101AC015773, AC015822, AC093772, AC015773, AC015822, AC093772
S/G/Y/R/B/O NT_022753 - RH596304562.59  4622.501AC026402, AC025511, AC026402
S/G/Y/R/B/O NT_022753 - RH661314570.83    1AC093591, AC021286, AC093591, AL591646
S/G/Y/R/B/O NT_022753 - RH663294560.59    0  
S/G/Y/R/B/O NT_022753 - RH667784565.55    1AC092629, AC092629
S/G/Y/R/B/O NT_022753 - RH692404558.46    0  


  NT_022753 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022753 - RH765314562.10    2AC097492, AC010354, AC097492, AC098585
S/G/Y/R/B/O NT_022753 - RH792414560.59    0  
S/G/Y/R/B/O NT_022753 - RH807834565.23    1AC093825, AC093825
S/G/Y/R/B/O NT_022753 - RH925404564.24    1AC097472, AC023143, AC097472
S/G/Y/R/B/O NT_022753 - RH926904583.15    0  
S/G/Y/R/B/O NT_022753 - RH927974562.10    1AC026402, AC025511, AC026402
S/G/Y/R/B/O NT_022753 - RH987704562.10    1AC026402, AC025511, AC026402
S/G/Y/R/B/O NT_022753 - RH990754562.10    1AC105421, AC025534, AC105421
S/G/Y/R/B/O NT_022753 - RH4286047169.004622.801AC108045, AC114735, AC108045, AC114735
S/G/Y/R/B/O NT_022753 - RH8347  47135.00  1AC110797, AC110797
S/G/Y/R/B/O NT_022753 - CHLC.GATA61A08    4641.300  
S/G/Y/R/B/O NT_022753 - RH894  46853.00  1AC053545, AC053545