Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_006118

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_006118	AC105925	181445642	3	RH92080	4	672.28					1		AC105925
S/G/Y/R/B/O	NT_006118	AC105925	181472339	3	AFMB291YF5					4	731.60	1		AC105925, AC110301
S/G/Y/R/B/O	NT_006118	AC093819	181575690	3	RH33664			4	9281.00			1		AC093819, AC110301
S/G/Y/R/B/O	NT_006118	AC093819	181581306	3	RH11908	4	671.87					1		AC093819, AC110301
S/G/Y/R/B/O	NT_006118	AC093819	181582110	3	RH41393	4	672.80					1		AC093819, AC110301
S/G/Y/R/B/O	NT_006118	AC093819	181582165	3	RH35844	4	673.41					1		AC093819, AC110301
S/G/Y/R/B/O	NT_006118	AC097537	181759247	3	RH104009	4	672.28					1		AC097537
S/G/Y/R/B/O	NT_006118	AC097537	181815569	3	RH48633	4	673.31					1		AC097537
S/G/Y/R/B/O	NT_006118	AC097537	181848901	3	RH48750	4	671.87					1		AC097537
S/G/Y/R/B/O	NT_006118	AC110794	181864870	1
S/G/Y/R/B/O	NT_006118	AC023537	182052157	1
S/G/Y/R/B/O	NT_006118	AC093605	182132116	1	RH92388	4	674.03					1	AC022988,	AC022988, AC092950, AC093605
S/G/Y/R/B/O	NT_006118	AC022988	182106996	1
S/G/Y/R/B/O	NT_006118	AC019163	182319902	3	RH77696	4	673.41					1		AC019163
S/G/Y/R/B/O	NT_006118	AC096567	182453503	3
S/G/Y/R/B/O	NT_006118	AC093801	182599416	3	RH36169	4	671.87					1		AC093801
S/G/Y/R/B/O	NT_006118	AC093801	182630347	3	WI-4573					4	733.40	1		AC093801
S/G/Y/R/B/O	NT_006118	AC093801	182671539	3	RH12081	4	673.21					1		AC093801
S/G/Y/R/B/O	NT_006118	AC092673	182715329	3	RH42912			4	9293.00			1		AC092673
S/G/Y/R/B/O	NT_006118	AC092673	182820117	3	CHLC.GATA67A08					4	739.40	1		AC092673
S/G/Y/R/B/O	NT_006118	AC092673	182832322	3	RH47883	4	673.93					1		AC092673
S/G/Y/R/B/O	NT_006118	AC105401	182867522	3
S/G/Y/R/B/O	NT_006118	AC105756	182893586	3
S/G/Y/R/B/O	NT_006118	AC097518	183178799	3	RH66623	4	673.93					1		AC013774, AC024453, AC097518
S/G/Y/R/B/O	NT_006118	AC027627	183418909	3	RH41436	4	673.31					1		AC027627
S/G/Y/R/B/O	NT_006118	AC078881	183596896	3	RH80317	4	674.74					1	AC106880, AC116620,	AC078881, AC084698, AC106880, AC116620
S/G/Y/R/B/O	NT_006118	AC106880	183598030	1
S/G/Y/R/B/O	NT_006118	AC116620	183616196	1
S/G/Y/R/B/O	NT_006118	AC103879	183661550	3
S/G/Y/R/B/O	NT_006118	AC019170	183777939	3	RH15183	4	676.14	4	9356.00	4	739.70	1		AC019170
S/G/Y/R/B/O	NT_006118	AC109519	183872758	1
S/G/Y/R/B/O	NT_006118	AC021850	183929903	3	WI-3707					4	739.60	1	AC109519,	AC021850, AC109519
S/G/Y/R/B/O	NT_006118	AC021850	184066971	3	WI-11238					4	734.80	1		AC021850, AC067788
S/G/Y/R/B/O	NT_006118	AC021200	184122989	3	CHLC.GATA42E01					4	739.20	1		AC021200, AC067788
S/G/Y/R/B/O	NT_006118	AC107384	184236117	3
S/G/Y/R/B/O	NT_006118	AC095041	184298827	3	RH28460	4	673.21					2	AC108205,	AC079294, AC095041, AC108205
S/G/Y/R/B/O	NT_006118		-		RH103378	4	673.41					0
S/G/Y/R/B/O	NT_006118		-		RH13894			4	9287.00			1	AC079919,	AC079919, AC084074
S/G/Y/R/B/O	NT_006118		-		WI-6619					4	734.80	1	AC093844, AC112698, AC114911,	AC093844, AC112698, AC114911
S/G/Y/R/B/O	NT_006118		-		RH59036	4	672.80			4	739.40	0
S/G/Y/R/B/O	NT_006118		-		RH59443	4	673.21					0	AC097653,	AC097653
S/G/Y/R/B/O	NT_006118		-		RH78127	4	673.72					0
S/G/Y/R/B/O	NT_006118		-		RH99078	4	673.21					0