Home    Genome Browser    BLAT Search    Help
  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006257
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006257AC0124841784880861          
S/G/Y/R/B/O NT_006257AC0269161784885381          
S/G/Y/R/B/O NT_006257AC0938031785326363          
S/G/Y/R/B/O NT_006257AC1107761787245391          
S/G/Y/R/B/O NT_006257AC0950451788754853          
S/G/Y/R/B/O NT_006257AC1095201790959893RH596154671.7649204.004733.202AC009873, AC009873, AC109520
S/G/Y/R/B/O NT_006257AC1052851791398693RH413074669.74    2AC009873, AC022691, AC009873, AC022691, AC098596, AC105285
S/G/Y/R/B/O NT_006257AC1052851791400413RH456774669.64    2AC009873, AC022691, AC009873, AC022691, AC098596, AC105285
S/G/Y/R/B/O NT_006257AC1052851791722793RH943684669.74    1AC022691, AC022691, AC098596, AC105285
S/G/Y/R/B/O NT_006257AC0226911792543381          
S/G/Y/R/B/O NT_006257AC0975341793272733RH656504664.18    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793342683RH940484669.74    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793359933RH14011  49239.00  1AC009588, AC009588, AC097534, M83665
S/G/Y/R/B/O NT_006257AC0975341793362783RH677964669.74    1AC009588, AC009588, AC097534, M83665
S/G/Y/R/B/O NT_006257AC0975341793399563RH1019154668.52    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793782763RH118844671.80    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793804953RH271304671.76    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793815503RH123604669.74    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793889953RH413784669.74    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793924413RH592094669.74    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793924413WI-12969    4727.001AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0975341793925543RH251004669.64    1AC009588, AC009588, AC097534
S/G/Y/R/B/O NT_006257AC0938491794034593RH593634669.74  4731.601AC009588, AC009588, AC093849
S/G/Y/R/B/O NT_006257AC0938491794172323RH590264669.7449196.004731.601AC009588, AC009588, AC093849
S/G/Y/R/B/O NT_006257AC0938491794420623RH688104669.74    1 AC093849
S/G/Y/R/B/O NT_006257AC0938491794624543RH482344671.80    1 AC093849
S/G/Y/R/B/O NT_006257AC0938491794802673RH595114671.76  4733.201 AC093849
S/G/Y/R/B/O NT_006257AC0938491794955253RH594394671.7649188.004733.201 AC093849
S/G/Y/R/B/O NT_006257AC0938491794956033RH590894669.74  4733.201 AC093849
S/G/Y/R/B/O NT_006257AC0938491794967233RH358084671.76    1 AC093849
S/G/Y/R/B/O NT_006257AC0938491795023203RH116844671.80    1 AC093849
S/G/Y/R/B/O NT_006257AC0938491795303833RH680684669.74    1AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795304663RH413844669.74    1AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795310013RH591284671.76  4733.201AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795384203RH593994671.76  4733.101AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795408013RH362634669.64    1AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795429473RH1032274672.08    1AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795433783RH1021154669.74    1AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC0938491795458123RH413994669.74    1AC113154, AC093849, AC113154
S/G/Y/R/B/O NT_006257AC1131541795954421RH1031514671.76    1AC079789, AC079789, AC113154
S/G/Y/R/B/O NT_006257AC1131541796035411WI-10380    4733.201AC079789, AC079789, AC113154
S/G/Y/R/B/O NT_006257AC0095881795884621          
S/G/Y/R/B/O NT_006257AC0797891796401933RH408846119.21    2AB014080, AC113154, AB014080, AC004206, AC079789, AC113154, AL662822, AL662873, AP000514
S/G/Y/R/B/O NT_006257AC0797891796586943WI-7434    4733.201AC113154, AC079789, AC113154
S/G/Y/R/B/O NT_006257AC1096401797916971          
S/G/Y/R/B/O NT_006257AC1068951799666121RH595724669.7449157.00  1 AC106895
S/G/Y/R/B/O NT_006257AC1068951799666121SGC33482    4727.001 AC106895
S/G/Y/R/B/O NT_006257AC1068951799666421RH649694669.74    1 AC106895
S/G/Y/R/B/O NT_006257AC0120551800218283          
S/G/Y/R/B/O NT_006257AC0976531802153743RH471044673.21    1 AC097653


  NT_006257 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006257AC0976531802320613RH592014671.87  4733.101 AC097653
S/G/Y/R/B/O NT_006257AC0976531802435053RH791844672.69    1 AC097653
S/G/Y/R/B/O NT_006257AC0976531802435433RH670324671.24    1 AC097653
S/G/Y/R/B/O NT_006257AC0976531803084683RH778984671.80    1 AC097653
S/G/Y/R/B/O NT_006257AC0976531803101673RH751914671.24    1 AC097653
S/G/Y/R/B/O NT_006257AC0976531803263263RH178614671.24    1 AC097653
S/G/Y/R/B/O NT_006257AC0976531803265743RH264274671.24    1 AC097653
S/G/Y/R/B/O NT_006257 - RH363354671.24    0  
S/G/Y/R/B/O NT_006257 - RH33697  49226.00  1AC097496, AC097496, AC104797
S/G/Y/R/B/O NT_006257 - WI-15112    4733.100AC097653, AC097653
S/G/Y/R/B/O NT_006257 - RH914  49231.00  1AC024706, AC024706
S/G/Y/R/B/O NT_006257 - D4S622    4733.201AC013342, AC093657, AC011019, AC013342, AC093657