Home    Genome Browser    BLAT Search    Help
  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022792
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022792AC0790841844621161          
S/G/Y/R/B/O NT_022792AC0211931844861383          
S/G/Y/R/B/O NT_022792AC1081691846960501          
S/G/Y/R/B/O NT_022792AC0250221847064641          
S/G/Y/R/B/O NT_022792AC1107641847237701          
S/G/Y/R/B/O NT_022792AC0967471849522593WI-10640    4741.101 AC096747
S/G/Y/R/B/O NT_022792AC1048261850283471RH42863  49438.004740.001 AC067900, AC104826
S/G/Y/R/B/O NT_022792AC1048261850283471RH591164683.37    1 AC067900, AC104826
S/G/Y/R/B/O NT_022792AC1046601851463323          
S/G/Y/R/B/O NT_022792AC0965901852776083          
S/G/Y/R/B/O NT_022792AC1048031854581673          
S/G/Y/R/B/O NT_022792AC1082211855590901          
S/G/Y/R/B/O NT_022792AC0974891857567793RH425424678.18  4741.101AC108141, AC097489, AC108141
S/G/Y/R/B/O NT_022792AC0974891857567793RH29122  49471.00  1AC108141, AC097489, AC108141
S/G/Y/R/B/O NT_022792AC1081411857660791          
S/G/Y/R/B/O NT_022792AC0936991858107053RH1038134678.23    1AC108141, AC093699, AC108141, AL079351
S/G/Y/R/B/O NT_022792AC0936991858147713WI-9904    4741.101AC108141, AC093699, AC108141, AL079351
S/G/Y/R/B/O NT_022792AC0936991858201263AFMB303XE1    4741.101AC108141, AC093699, AC108141, AL079351
S/G/Y/R/B/O NT_022792AC0192351859148083WI-5407    4741.101 AC019235, AL079351
S/G/Y/R/B/O NT_022792AC0937571861038353          
S/G/Y/R/B/O NT_022792AC0937361861677413WI-5859    4733.401 AC093736
S/G/Y/R/B/O NT_022792AC0938401863964433WI-5661    4741.101 AC016241, AC093840
S/G/Y/R/B/O NT_022792AC0847411865321503RH30890  49516.00  1 AC084741
S/G/Y/R/B/O NT_022792AC0847411865444333RH304  49529.00  1 AC084741
S/G/Y/R/B/O NT_022792AC0936691865764713RH591774678.18  4741.101 AC016316, AC093669
S/G/Y/R/B/O NT_022792AC0936691866522813RH179964678.23    1  
S/G/Y/R/B/O NT_022792AC0988641867258723RH782544678.23    1  
S/G/Y/R/B/O NT_022792AC1081421868856093RH929594678.23    1 AC108142
S/G/Y/R/B/O NT_022792AC1081421869413313RH413064678.23    1AC084844, AC084844, AC108142
S/G/Y/R/B/O NT_022792AC1081421869416553RH456734678.23    1AC084844, AC084844, AC108142
S/G/Y/R/B/O NT_022792AC0848441869424941          
S/G/Y/R/B/O NT_022792AC0925371870491591          
S/G/Y/R/B/O NT_022792AC0967241871020531          
S/G/Y/R/B/O NT_022792AC0826491871553373          
S/G/Y/R/B/O NT_022792AC0205511873264843          
S/G/Y/R/B/O NT_022792AC0210111874445223          
S/G/Y/R/B/O NT_022792AC0974791875087013AFM214XH10    4739.701 AC097479
S/G/Y/R/B/O NT_022792AC0974791875168453CHLC.GATA42H02    4739.701 AC097479
S/G/Y/R/B/O NT_022792AC0974791875410443AFMB303ZH5    4738.301 AC097479
S/G/Y/R/B/O NT_022792AC0187101876223283          
S/G/Y/R/B/O NT_022792AC0950651878427483CHLC.GATA7F07    4739.701 AC021634, AC095065
S/G/Y/R/B/O NT_022792AC0170871880087963WI-10757    4743.401AC109641, AC113605, AC017087, AC109641, AC113605
S/G/Y/R/B/O NT_022792AC0170871880259053AFM210WC7    4736.501AC109641, AC113605, AC017087, AC109641, AC113605
S/G/Y/R/B/O NT_022792AC1136051880877771          
S/G/Y/R/B/O NT_022792AC1096411881421481          
S/G/Y/R/B/O NT_022792AC0801101881424191          
S/G/Y/R/B/O NT_022792AC0790081881471501          
S/G/Y/R/B/O NT_022792AC0974821881697173          
S/G/Y/R/B/O NT_022792AC1082051884537433RH284604673.21    2AC095041, AC079294, AC095041, AC108205
S/G/Y/R/B/O NT_022792AC0792261884793783RH104074681.63    1 AC079226


  NT_022792 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022792AC0792261884810983RH261714678.23    1 AC079226
S/G/Y/R/B/O NT_022792AC1052881887358683RH32691  49560.00  1 AC105288
S/G/Y/R/B/O NT_022792AC1052881887359103RH664424678.23    1 AC105288
S/G/Y/R/B/O NT_022792AC1093531887841503          
S/G/Y/R/B/O NT_022792AC0936011888366773          
S/G/Y/R/B/O NT_022792AC0677311889548061          
S/G/Y/R/B/O NT_022792 - RH163894676.44    0  
S/G/Y/R/B/O NT_022792 - RH163914678.18    0  
S/G/Y/R/B/O NT_022792 - RH412734678.23    0