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  Chromosome 4 - RH Maps - Single Contig
 

Chromosome 4 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_022782
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022782AC027417426448771          
S/G/Y/R/B/O NT_022782AC098590426504761          
S/G/Y/R/B/O NT_022782AC114774426968191          
S/G/Y/R/B/O NT_022782AC009611427796101          
S/G/Y/R/B/O NT_022782AC084194427883161          
S/G/Y/R/B/O NT_022782AC068167427982941          
S/G/Y/R/B/O NT_022782AC092581428237953          
S/G/Y/R/B/O NT_022782AC080132429858703          
S/G/Y/R/B/O NT_022782AC110799430981903          
S/G/Y/R/B/O NT_022782AC114757432219751          
S/G/Y/R/B/O NT_022782AC108149432795033          
S/G/Y/R/B/O NT_022782AC093861433966563RH5306512387.18  12480.401 AC093861
S/G/Y/R/B/O NT_022782AC093861433984333RH271954223.09    1 AC093861
S/G/Y/R/B/O NT_022782AC093861433995153CHLC.GATA7D01.230    4235.501 AC093861
S/G/Y/R/B/O NT_022782AC093861434106613RH422084223.20  4235.101 AC093861
S/G/Y/R/B/O NT_022782AC093861434106613RH329  42724.00  1 AC093861
S/G/Y/R/B/O NT_022782AC079085435675471          
S/G/Y/R/B/O NT_022782AC093852437153383          
S/G/Y/R/B/O NT_022782AC108478438383743          
S/G/Y/R/B/O NT_022782AC096586438661013RH70255X350.95    2U52112, U52112, X79198
S/G/Y/R/B/O NT_022782AC096586439012793RH594414223.38  4238.501 AC024667, AC096586
S/G/Y/R/B/O NT_022782AC096586439040223RH263084223.38    1 AC024667, AC096586
S/G/Y/R/B/O NT_022782AC096586439063473RH593814223.61  4238.701 AC024667, AC096586
S/G/Y/R/B/O NT_022782AC096586439064663RH262494223.26    1 AC024667, AC096586
S/G/Y/R/B/O NT_022782AC110811440169341          
S/G/Y/R/B/O NT_022782AC093755440340723          
S/G/Y/R/B/O NT_022782AC108467441872301RH261894224.08    1 AC108467
S/G/Y/R/B/O NT_022782AC093795442697153          
S/G/Y/R/B/O NT_022782AC112724444536321          
S/G/Y/R/B/O NT_022782AC108026444918543          
S/G/Y/R/B/O NT_022782AC108043446157563          
S/G/Y/R/B/O NT_022782AC020713447583301AFMB346XE9    4247.701 AC020713
S/G/Y/R/B/O NT_022782AC096737449371033          
S/G/Y/R/B/O NT_022782AC108212451022343          
S/G/Y/R/B/O NT_022782AC095058451268773RH151464236.88  4246.001 AC095058
S/G/Y/R/B/O NT_022782AC095058451268773RH259  42807.00  1 AC095058
S/G/Y/R/B/O NT_022782AC096592453368803WI-11233    4248.701 AC025955, AC096592
S/G/Y/R/B/O NT_022782AC104072454454803RH991744234.25    1AC093745, AC093745, AC104072
S/G/Y/R/B/O NT_022782AC104072454626103RH651554227.23    1AC093745, AC093745, AC104072
S/G/Y/R/B/O NT_022782AC093745455174973RH28942  42819.00  1 AC093745
S/G/Y/R/B/O NT_022782AC093745455299363RH370144243.3842827.00  1 AC093745
S/G/Y/R/B/O NT_022782AC095060455517913          
S/G/Y/R/B/O NT_022782AC097451457169413          
S/G/Y/R/B/O NT_022782AC108140458617493          
S/G/Y/R/B/O NT_022782AC111198459014493          
S/G/Y/R/B/O NT_022782AC098861459720783          
S/G/Y/R/B/O NT_022782AC106896461558693          
S/G/Y/R/B/O NT_022782AC108035461578633          
S/G/Y/R/B/O NT_022782AC096734462929183          
S/G/Y/R/B/O NT_022782AC110788464726711          


  NT_022782 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022782AC084850465117671          
S/G/Y/R/B/O NT_022782AC084010466970583RH251694204.19    1 AC084010
S/G/Y/R/B/O NT_022782AC084010466979763RH595394205.43  4219.401 AC084010
S/G/Y/R/B/O NT_022782AC084010466980473RH8695  42590.00  1 AC084010
S/G/Y/R/B/O NT_022782AC024022467043213RH653804201.85    1AC084010, AC024022, AC084010
S/G/Y/R/B/O NT_022782AC111006468761971          
S/G/Y/R/B/O NT_022782AC113151469505021          
S/G/Y/R/B/O NT_022782AC013523470218031RH748154207.20    2AC007799, AC113151, AC007799, AC013523, AC113151
S/G/Y/R/B/O NT_022782AC013523470249581RH591794211.53  4221.101AC007799, AC113151, AC007799, AC013523, AC113151
S/G/Y/R/B/O NT_022782AC013523470250821RH672254215.81    1AC007799, AC113151, AC007799, AC013523, AC113151
S/G/Y/R/B/O NT_022782AC007799470175321RH748154207.20    2AC013523, AC113151, AC007799, AC013523, AC113151
S/G/Y/R/B/O NT_022782AC007799470781601RH370024220.1642606.00  1AC013523, AC007799, AC013523
S/G/Y/R/B/O NT_022782AC108210471125021          
S/G/Y/R/B/O NT_022782AC106052471212601RH753734201.64    1AC007799, AC013523, AC113151, AC007799, AC013523, AC027699, AC106052, AC113151
S/G/Y/R/B/O NT_022782AC106052471387041RH591204203.97  4217.701AC007799, AC013523, AC113151, AC007799, AC013523, AC027699, AC106052, AC113151
S/G/Y/R/B/O NT_022782AC106052471496121RH678284217.00    1AC007799, AC013523, AC113151, AC007799, AC013523, AC027699, AC106052, AC113151
S/G/Y/R/B/O NT_022782AC105389473652063RH683044212.15    1 AB015671, AC105389, AF117979
S/G/Y/R/B/O NT_022782AC105389474103633RH591194211.34  4226.801 AC105389
S/G/Y/R/B/O NT_022782AC105389474115193RH596324203.97  4217.501 AC105389
S/G/Y/R/B/O NT_022782AC105389474126423RH173944211.63    1 AC105389
S/G/Y/R/B/O NT_022782AC105389474126873RH784904201.64    1 AC105389
S/G/Y/R/B/O NT_022782AC105389474393473RH589484207.40  4223.901 AC105389
S/G/Y/R/B/O NT_022782AC105389474406983RH261224207.30    1 AC105389
S/G/Y/R/B/O NT_022782AC105389474616293RH494944209.4242606.00  1 AC105389
S/G/Y/R/B/O NT_022782AC027697475505221RH799489343.00    2AL512601, AC027697, AL512601
S/G/Y/R/B/O NT_022782AC007828475697261          
S/G/Y/R/B/O NT_022782 - RH110864215.40    1AC021180, AC021180
S/G/Y/R/B/O NT_022782 - RH30865  42472.00  1AC093804, AC093804
S/G/Y/R/B/O NT_022782 - WI-16758    4219.201AC096712, AC096712
S/G/Y/R/B/O NT_022782 - RH589504223.73    1AC092597, AC107398, AC092597, AC107398
S/G/Y/R/B/O NT_022782 - RH30866  42515.00  1AC095043, AC095043
S/G/Y/R/B/O NT_022782 - RH325  42646.00  0  
S/G/Y/R/B/O NT_022782 - RH32957  42612.00  0  
S/G/Y/R/B/O NT_022782 - RH33762  42553.00  2AC006006, AC006006, AC069511
S/G/Y/R/B/O NT_022782 - RH38474  42366.00  1AC010925, AC079921, AC010925, AC079921
S/G/Y/R/B/O NT_022782 - RH7906  42630.00  1AC012028, AC080115, AC012028, AC080115
S/G/Y/R/B/O NT_022782 - RH8323  42345.00  1AC108044, AC108044
S/G/Y/R/B/O NT_022782 - RH8336  42362.00  0AC010925, AC079921, AC010925, AC079921
S/G/Y/R/B/O NT_022782 - RH8356  42633.00  1AC012028, AC080115, AC012028, AC080115
S/G/Y/R/B/O NT_022782 - RH8360  42633.00  1AC012028, AC080115, AC012028, AC080115
S/G/Y/R/B/O NT_022782 - RH593964220.96  4235.801AC011248, AC026112, AC011248, AC026112
S/G/Y/R/B/O NT_022782 - RH648464205.89    0